Scomber scombrus (Atlantic mackerel): 133994349
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Entry
133994349 CDS
T10651
Symbol
ubb
Name
(RefSeq) polyubiquitin-B
KO
K08770
ubiquitin C
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03320
PPAR signaling pathway
ssco04120
Ubiquitin mediated proteolysis
ssco04137
Mitophagy - animal
ssco04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133994349 (ubb)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133994349 (ubb)
04137 Mitophagy - animal
133994349 (ubb)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
133994349 (ubb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
133994349 (ubb)
Ubiquitin system [BR:
ssco04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
133994349 (ubb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Dsc3_N
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
133994349
NCBI-ProteinID:
XP_062289582
LinkDB
All DBs
Position
14:complement(7118198..7126942)
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AA seq
783 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGQSEGGISE
GKPDVKPKQIVSLNMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFA
GKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKI
QDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTIT
LEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR
GGQ
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaagacccttactggtaagaccatcacccttgaggtcgagcccagc
gacaccatcgaaaatgtcaaggcaaagatccaggacaaggaaggcattccccccgaccag
cagaggctgatctttgctggcaagcagctggaagatggccgcaccctctccgactacaac
atccagaaagagtccaccctccatcttgtcctgcgtctgaggggtggcatgcagatcttt
gtgaagaccctcactggcaagaccatcaccctggaggtcgagcccagcgacaccattgaa
aatgtcaaggccaagatccaggataaggaaggcattccccccgaccagcagaggctgatc
tttgctggcaagcagctggaagatggccgcaccctctccgactacaacatccagaaagag
tccaccctccatcttgtcctgcgtctgaggggtggcatgcagatcttcgtcaagaccctc
actggcaagaccatcaccctggaggtcgagcccagcgacactattgagaacgtcaaggcc
aagatccaggataaggaaggcattccccccgaccagcagaggctgatctttgctggcaag
cagcttgaagatggccgcaccctctccgactacaacatccagaaagagtccaccctccat
cttgtcctgcgtctgaggggcggcatgcagatctttgtgaagaccctcactggtaagacc
atcaccctggaggtcgagcccagcgacaccattgaaaatgtcaaggccaagatccaggat
aaggaaggcatcccccccgaccagcagaggctgatctttgctggcaagcagcttgaagat
ggccgcaccctctccgactacaacatccagaaagagtccaccctccatcttgtcctgcgt
ctgaggggcggcatgcagatctttgtgaagaccctcactggtaagaccatcaccctggag
gtcgagcccagcgacaccattgaaaatgtcaaggccaagatccaggataaggaaggcatc
ccccccgaccagcagaggctgatctttgctggcaagcagctggaagatggccgcaccctc
tccgactacaacatccagaaagagtccaccctccatcttgtcctgcgtctgaggggcggc
atgcagatctttgtgaagactctgaccggtaagaccatcaccctggaggttgagcccagt
gacaccattgagaacgtcaaggctaagatccaggacaaggaaggcattcccccagaccag
cagaggctgatctttgctggcaagcagctggaagatggccgtaccctctccgactacaac
atccagaaagagtccaccctccatcttgtcctgcgtctgaggggtggcatgcagatcttc
gtcaagaccctcactggcaagaccatcaccctggaggtcgagcccagcgacaccattgag
aatgtcaaggccaagatccaggacaaggaaggcattcccccagaccagcagaggctgatc
tttgctggcaagcagctggaagatggccgcaccctctccgactacaacatccagaaagag
tccaccctccatcttgtcctgcgtctgagaggcgggcagtcagagggcggtatttctgag
gggaagccggacgtgaaacccaaacaaattgtaagtctaaacatgcagatctttgtgaag
acccttactggcaagaccatcacccttgaggtcgagcccagtgacaccattgaaaatgtc
aaggccaagatccaggacaaggaaggcattccccccgatcagcagaggctgatctttgct
ggcaagcagctggaagatggccgtaccctctctgactacaacatccagaaagagtccacc
ctccatcttgtcctgcgtctgaggggtggcatgcagatcttcgtcaagaccctcactggc
aagaccatcactctggaggtcgagcccagcgacaccattgagaacgtcaaggccaagatc
caggacaaggaaggcattccccccgaccagcagaggctgatctttgctggaaagcagctt
gaagatggccgtaccctctctgactacaacatccagaaagagtccaccctccatcttgtc
ctgcgtctgaggggcggcatgcagatctttgtgaagaccttgaccggtaagaccatcacc
ctggaggttgaacccagcgacaccattgagaacgtcaaggccaagatccaggacaaggaa
ggcattcccccagaccagcagaggctgatctttgctggcaagcagctggaagatggccgt
accctctccgactacaacatccagaaagagtccaccctccatcttgtcctgcgtctgagg
ggtggtcaataa
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