Scomber scombrus (Atlantic mackerel): 133994371
Help
Entry
133994371 CDS
T10651
Symbol
nectin3b
Name
(RefSeq) nectin-3-like protein
KO
K06592
poliovirus receptor-related protein 3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04514
Cell adhesion molecules
ssco04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133994371 (nectin3b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
133994371 (nectin3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssco04515
]
133994371 (nectin3b)
04090 CD molecules [BR:
ssco04090
]
133994371 (nectin3b)
Cell adhesion molecules [BR:
ssco04515
]
Immunoglobulin superfamily
Nectin family
133994371 (nectin3b)
CD molecules [BR:
ssco04090
]
Proteins
133994371 (nectin3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
ig
C2-set_2
I-set
Ig_2
TM_ErbB1
MINT_RID
Zip
Motif
Other DBs
NCBI-GeneID:
133994371
NCBI-ProteinID:
XP_062289600
LinkDB
All DBs
Position
14:complement(10119314..10135532)
Genome browser
AA seq
576 aa
AA seq
DB search
MDHSSGGGGVAVDPRQMTVYFHCQREIALFLKNVTVFIPELPRTAGQGVWSSQVIVPQRV
SAVLGKNVTLECMVEVGTNLTLTQSSWERRLPSGSVTVAVYNPEFGISIPPEFSNRLYFR
SPSSHDATIVLENVAFSDVGIYTCKVATFPLGNTQASTTVSVLVEPKVYVSAGSTALIDG
GNETVVATCIAERARPPAEVSWESNLFGRSEVQLFDEANGTTSTQVRYLWQPTRHVQGHA
LTCVVRHPALRNDFRIPYQLNVQFAPDISVVGYDGDWYVGRENVQMTCKANANPPAHHFR
WIRLDSEMPQGVETINSTLLFLRPLKRNDSGVYRCEVANDINLRSRDVRILIQDPPTMPS
TITAPVLTGSASSTLVDDKHHVLLSSPTLEALPEGNLGSIVGGAVGGALFLLLLLCLVGV
CYLRKQQTFHGNYYTKQYLGPNDLQKAPAHHELHPTKAGSSSHHQDHDREEWGGRELKHE
RDRRHHSNYNGEEYPSNGYTRAMRESSHHNSQQNHHHEHTQYSSPRQARSARYPHPPKPL
ENGSPYMSDDCYDSGPEGDYVSHTDGSVISRREWYV
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggatcattcctccgggggggggggtgttgctgtggaccctcgacagatgaccgtttac
ttccattgccagcgagagattgcactgtttcttaaaaatgttaccgtcttcataccggag
ttacctcggacagcagggcaaggtgtgtggagcagtcaagtgatcgtgccgcagagggtg
agcgctgtgctggggaagaatgtgacgttagagtgcatggtggaggtgggcacaaacctc
acgctcactcagagttcctgggagcgccgtctgccttcaggctctgtcacagtggctgtc
tacaaccccgagttcggcatctccatcccgccagagtttagcaatcgcctgtattttcgc
tcaccatcctctcacgatgccaccatcgtactggagaatgtggccttttctgacgtcggc
atatatacctgtaaggttgctacatttccactggggaacactcaagcctccacgaccgtt
agtgtactcgtggagccgaaggtctacgtgtctgcaggatcaaccgccctgatcgatggt
ggcaatgaaactgtggtggccacctgtattgctgagcgggcccgtccccccgctgaggtg
tcctgggaatccaaccttttcggccggtcagaagtgcaactatttgatgaagccaacggc
accacgagcacacaagtgcgctacctctggcaacccacacgccacgtccagggccacgca
cttacctgtgttgtccgccacccggcactgcggaatgacttcaggatcccctaccagctc
aatgtgcagtttgctcctgatatctcagtcgtggggtatgatggagactggtatgtgggc
cgggaaaacgttcagatgacgtgcaaagccaacgcaaatccaccagctcatcacttcaga
tggatcagattggacagtgaaatgccacaaggagtggaaacgataaacagcactctgctc
ttcctgcgtcccctcaagcgcaatgactctggagtttacaggtgtgaggttgccaatgac
atcaacctccgcagtcgggatgtgcgcattctcatacaagatcctcccaccatgccttcc
accatcactgctcctgtcctaaccggttctgcctcctccaccttagtggatgataaacac
catgtcctcctcagctcccccactcttgaagccctacctgagggtaatctgggttccata
gtgggtggggctgtgggcggggccttgttcctacttctgctgctgtgtctggtgggcgtg
tgttacctacggaaacagcagaccttccacgggaactactacaccaagcagtacctgggc
cccaatgacctccagaaagcccccgcgcatcacgagctccaccccaccaaagctggcagc
agctcccaccatcaggaccacgaccgagaggagtggggcggccgggagctcaaacacgag
cgtgaccgtcgtcaccatagcaactataacggagaggaatatccctctaatggctacact
agggcaatgagggagagcagccaccacaacagtcagcagaaccaccaccacgaacacaca
cagtattctagtccgcggcaggccagaagtgccagataccctcatccgcccaagccactg
gaaaatggctccccctacatgtcagacgactgctacgatagcgggcccgagggcgattat
gtctctcacacggatggctcagtcatctctcgtagggagtggtacgtttga
DBGET
integrated database retrieval system
