KEGG   Scomber scombrus (Atlantic mackerel): 133994373
Entry
133994373         CDS       T10651                                 
Symbol
xpa
Name
(RefSeq) DNA repair protein complementing XP-A cells
  KO
K10847  DNA-repair protein complementing XP-A cells
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    133994373 (xpa)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ssco03400]
    133994373 (xpa)
DNA repair and recombination proteins [BR:ssco03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     133994373 (xpa)
SSDB
Motif
Pfam: XPA_C XPA_N Ion_trans_N
Other DBs
NCBI-GeneID: 133994373
NCBI-ProteinID: XP_062289604
LinkDB
Position
2:12472161..12477481
AA seq 275 aa
MEPSKLEGMDAAGPGPEQSPKPELSAAMRAKIERNRQRALMLRQARLASRSLSAVEGATA
AKVSKTIDSGAGFFIEEEEDEEEEQRAKKVVHQPAPVIEPDYLLCDECEKPFMDSYLSNS
FDLCVCDNCRDNKEKHKLISRTEAKQHYLLKDCDLDKREPPLRFILKKNPHNPTWGDMKL
YLKLQVEKRCMEVWGSEEALEEAKETREENKEVQKQKRFNKKVKELRRAVRSSMWTKDTS
VHQHQYGPEEVVDPDEDLYKKTCTTCGHELTYEKM
NT seq 828 nt   +upstreamnt  +downstreamnt
atggagccgtcaaagttagaggggatggatgctgccggtcccggtccagaacagagtccc
aaacccgagctttctgcagcgatgcgggctaaaatcgagaggaaccggcagcgggcgttg
atgctccgacaagcccgactggcgagccgctctttgtccgccgtggaaggcgcaaccgcg
gctaaagtctccaagaccattgactccggggccggctttttcatcgaggaggaggaggat
gaagaggaagagcaaagggccaagaaagtggtgcatcagccagctccagtgattgagcca
gactacctcctgtgtgatgagtgtgaaaaacccttcatggactcctacctcagcaacagc
tttgatctgtgtgtgtgtgacaactgcagagacaacaaggagaagcacaagctgatctcc
cgaactgaagccaaacagcactacctgctgaaggactgtgacctggacaagagagagcct
ccgctcaggtttatactgaagaaaaaccctcacaacccaacctggggggacatgaagctc
tacctcaaactacaggtggagaagaggtgtatggaggtgtgggggtcagaggaggctctg
gaggaggccaaagagacgagagaagagaacaaagaggtccagaaacaaaagcgcttcaac
aagaaagtcaaagagctacgcagggcggtgaggagcagtatgtggaccaaagacaccagc
gttcaccaacatcagtatggaccagaggaggtggtggatccagatgaggacctctacaag
aaaacctgcaccacctgtggacatgaactcacctacgagaagatgtag

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