KEGG   Scomber scombrus (Atlantic mackerel): 133994418
Entry
133994418         CDS       T10651                                 
Symbol
tlr3
Name
(RefSeq) toll-like receptor 3
  KO
K05401  toll-like receptor 3
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco04217  Necroptosis
ssco04620  Toll-like receptor signaling pathway
ssco05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04217 Necroptosis
    133994418 (tlr3)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    133994418 (tlr3)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    133994418 (tlr3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:ssco04054]
    133994418 (tlr3)
   04090 CD molecules [BR:ssco04090]
    133994418 (tlr3)
Pattern recognition receptors [BR:ssco04054]
 Membrane-bound pattern recognition receptors
  Toll-like receptors
   133994418 (tlr3)
CD molecules [BR:ssco04090]
 Proteins
  133994418 (tlr3)
SSDB
Motif
Pfam: LRR_8 LRR_4 Tlr3_TMD LRR_5 TIR LRR_9 TIR_2 LRR_Zer-1 KH_PARP14_4 LRR_6 LRRNT LRR_EndoS
Other DBs
NCBI-GeneID: 133994418
NCBI-ProteinID: XP_062289658
LinkDB
Position
2:complement(26069591..26076238)
AA seq 924 aa
MQKAIRRRQNLVFEAMGIPHFPFLPAVIILCYFMLGHCVASPKKTSCTVQDGRADCSRLS
LQAVPPDLPRNITSLDMSHNRLVGIPTPSLTPYQGLLHLNVGFNSITRLDQGLCQTLSLL
QTLNVEHNEVHVLETGDIIHCTNLTGLNLGSNRLKLKGEPFLVLQSLKFLDVSQNKLLAA
KLGSQPQLPRLENLNLASNIFTTLKKDDFFFLNDSSLQFLNLSSVSLKTLEPGCFEPISG
LHTLIMDKSNMGTLVISKLCSQLSGTAINALSLQKMKLVTLTKTTFTGLEKTNLTSLDLS
SNGMGKIENGSFQWLSRLLTLILADNNIKHLTKGTFEGLKSLKKLSLSKALVKSHTSSTP
IIDDFSFQPLSALESLILQRTSVRDLTENTFTGLTSLKELDMSWSSYSSLKNLTKKTLAS
LAGSPLRVLNLTATAIVQINPGAFCNLGNLTTLLLDFNFIKQTLTGKEFEGLGQIQEIHI
SNNRQSVNLNSTSFVNVPSLRVLTLGKSLTVSALDKDLSPFRSLSNLTFLDLSNNNIANM
RENLLDGLVNLKVLKLQHNNLARLWKSANPGGPVLFLKGTQSLLSLQLDSNGLDEIPVEG
LKGLSNLHDLSVANNLLNSLKDSIFDDLNSLKVLRLQKNFITTVRPEVFKTPMSNLSVLV
MDKNPFDCTCESILWFVTWLNNTNTTSVPGLSDQYKCNTPLAYFNRSIMDFDTLSCKDMA
PFQALYILSSTVVIMLIVSALLVRFHGWRIQFYWNIVINRTLGFSDATVEEGREFEYDAY
VIHAAEDASWVGKRIASLGNENCKFCLEDQDSVPGMSQLESILENIRKSRKILFVITERL
LRDPWCTRFTAHHALHQVIEDSRDSVILVFLQDVHDYKLSQSLFLRRGMLRPCCILNWPV
HKERVPAFHQKLLIALSMTNRLQQ
NT seq 2775 nt   +upstreamnt  +downstreamnt
atgcaaaaggctatacgaagaagacaaaatctggtttttgaagcaatgggcatccctcat
ttccctttcctccctgcggtgatcatattatgttattttatgttaggccattgtgtggca
tccccaaaaaagacctcttgcactgtccaagacggcagagctgactgcagccgcctcagc
ctccaggcggtccctccagatctcccaaggaacatcaccagcctcgatatgtctcacaac
agattggtggggattcccacaccgtcactaaccccatatcaaggcctcctccacctcaat
gttggtttcaacagtatcaccaggctggaccagggtttgtgccagacactgtctctgctg
cagacactgaacgtggaacacaacgaagtacatgtgctggagactggggatatcatccac
tgtaccaatctaacggggttgaatctgggtagcaataggctgaagctaaaaggagaaccc
ttccttgtactacagagcctgaaatttcttgatgtttcacaaaacaaactgttggctgcc
aagcttggctctcagcctcagctacccaggctggaaaatctcaatttggcctcgaatatc
ttcaccactttgaagaaagacgactttttcttcctcaacgattcatctctgcaattcctc
aacctgtcatctgtatctctaaaaacattggagcctggttgctttgagcccatttcaggt
ctacatactttaatcatggataaaagcaatatgggcactctggttatttctaaactgtgc
tcccagctgtcaggaacagccattaatgccctgtctctgcagaagatgaagctggtcaca
ctcacaaaaacaacatttacagggctagagaaaacaaatctaacctctctggatctgtcc
agtaatggcatgggtaaaattgaaaatggctcatttcagtggctgtccagacttctgact
ctaattctggcagacaataacatcaagcacctaacaaagggcacatttgaggggcttaaa
agtttgaaaaaactcagcttgagcaaagctctggtgaaaagtcatacctcctccacccca
attattgatgatttctccttccaaccattaagtgccttggagagtttaattttacagaga
acttcagttcgggacctcacagaaaacaccttcacaggcttgacaagtcttaaagaactt
gacatgagctggagcagttattcatcactcaaaaacctcaccaaaaagaccctagcctct
cttgcaggatcacctctcagagtgctaaatctgacagcaacagctatagtacagattaat
cctggagccttctgcaatttgggaaacctcaccactcttcttctggatttcaattttatc
aagcaaactctcactgggaaagagtttgaaggcctgggtcaaattcaagagatccacatt
tccaataatcgccagagtgtcaacctaaactccacatcgtttgtgaatgtacccagtctt
agggttctgactttggggaaaagccttacagtttcagccttggacaaggatctctctcca
ttcagatccctatccaacctcactttcctggatctcagcaacaacaacattgctaacatg
agagagaatctgttggatgggcttgttaacctgaaggtcctgaagctccagcacaataac
ttagctcggttgtggaagagtgccaacccaggtgggccagtgttgtttctcaaagggaca
cagagcttgttatccttacagctggatagtaatgggctggatgagatcccagtggagggt
ctgaaaggtttgagtaacctccatgacctaagtgtggccaacaatctccttaatagtctt
aaggactcaatttttgatgatctgaactcactgaaggttttacgtttacagaagaacttt
atcacaactgtgaggcctgaagtgttcaaaacccctatgagcaacctcagcgtgctcgtc
atggacaaaaatccatttgactgtacctgtgagagcatcctgtggtttgtgacatggttg
aataacacaaatacaaccagtgtgccaggtctcagtgaccagtataagtgcaacactcct
ctggcttactttaaccgctccatcatggattttgacacactttcttgcaaagatatggcc
ccattccaggccctttacatactgagcagcacagtcgttatcatgctgattgtaagtgca
ctcctggtgcggttccatggctggaggattcagttctattggaacattgtaatcaatcgc
acattaggatttagtgacgccacagttgaagagggcagggagtttgagtatgacgcctat
gtcatacatgcagcagaagacgccagctgggttgggaaaagaatagcctctttagggaat
gaaaactgcaagttttgtttggaggatcaggattcagtccctggcatgtcacagcttgaa
tcaattctggaaaatattagaaagtccagaaaaatcctgtttgtcatcactgaaaggctt
ctcagagatccctggtgtacacgctttacagcccatcatgcacttcaccaggtcattgaa
gacagcagggactctgtgattctggtcttcctgcaggatgtgcacgactacaagttatct
caatctctcttcctccgcaggggcatgttgcgcccatgctgcatcctcaactggcctgtc
cataaggagagagtgccagcctttcaccagaagctcctcatagcactcagcatgactaat
cgattgcagcagtga

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