Scomber scombrus (Atlantic mackerel): 133994419
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Entry
133994419 CDS
T10651
Name
(RefSeq) cilia- and flagella-associated protein 54-like
KO
K25553
cilia- and flagella-associated protein 54
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssco03037
]
133994419
Cilium and associated proteins [BR:
ssco03037
]
Motile cilia and associated proteins
Sperm associated proteins
133994419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CFAP54_N
fn3
Motif
Other DBs
NCBI-GeneID:
133994419
NCBI-ProteinID:
XP_062289654
LinkDB
All DBs
Position
14:complement(12936734..13004181)
Genome browser
AA seq
2541 aa
AA seq
DB search
MDFPASYYGKLDKRNPVISAFERDINSFITLMRRVASSTSSDNSSYAKGIKILVEIWRNY
KHRLPSKLYQEHMLQIADFLCGIKLYQLALWHGYSLHLLQFSSVNITDITDVDHLMTCFF
PEGFDTDQDTLDMKICAMLGCVQCVFELEKGHSILGQKGLCKLLQVLNFIRIMMQAFQQH
EHLCWHIYNGSLHIYNICRYLMTMNCSAQALEYLLWASISLELSVPLMTAKYLPWIVTLY
CAVCHCYYDNLATVQAEEFARRALGKINDLAELEQQSGVLATRETQRAFKEASIKLAAMM
FKRAVFEARKRPKNMFRVKTKSTLKDIPNVPWPRNTTERMLMGLFDSKAAQFLGILETLW
DSTKRPLHTRVSDEPELQELVLELLSAGISILSGTASASEQKRDDPPCMSLSAMTSTSPL
MDLAITGENKVSFMSAVRFIKLLFQYKQPDAFTQLAGEMLQVLSGAEGQSYRKAETELAV
LYSFNSLQSSQRSHPREDSIINDRHKSSVSMSDEFIGLVDALHKSVCGFAPEVQPDGDLV
LEVVLFLWGKVKVVMQKDQLQNSNFEKVDNYHKWVWCLYMLCEVAFAFELATVDCIMTAE
MIHTLAILLESAAERNKQTHCPAAHVADDDGVKPNSFTLLQRSSTELLQKVCEVVKRGLE
ALAKGVATLMPQNCSSITDFALMQEKEVETKAESDIKSSRHTQSTCVSLLATDLHLELHI
IHCRAFLKLLQLNAVVESDLLDQIKKNKVSKALFLMQKALLVYNSMEPNKNSKTKFLLEE
ASTLIEKAGVEERKLYMSTTPKAPAENQDKGLKEEKENPPPPPILLSCTDHSLTFTPAPY
YREGQVCWYQLCGRAAEGINRKVRLGDYSLPGTGNLVPAVSGECVLRVEGLEPNQKYMFA
VAAYNSQGKLLGNSIGETTFPLLASMPTSLLSTWAHLAQMAFQTEQYDVAKRACRELWSH
YTFSDPHSTRDRLATTGLHIQTLQHSSPLLCQLFLTSIFIETEINIQQGSLYCDSSSDNG
LFIWEQEARLAECERMLVAIDVAMWLSDSSAALQAVVSCYSLLAPLIFHQIACDPVVQVL
TKCLIVLEENSALLKQKWTGNTSESLIHMIACITYYLSKALRVLKEPQRASALMDCGRTL
LQDVFDAQLQISRVANKAVGLKALHGKNKIRFTSEAAVSPDHEISRPLTGCEDPAVLYDR
ISSSTLKDAYQDVMKLRRKAYFIEFAALLIQRTMEEGHTDLVLKWGQTILEFLCRRDEVM
GLSTKCLEGNGQSKRKSSVQTLKGNEPPQNKNTSSHDDVRKRLKQKMPPSMLQKVRTNRE
MQAVENLLTLLSSVVQRHKKQFQLRNMCCEERVWKSHLNYSLAHAHLAVFYQALNQLLGG
DLQHRYSQLNPLCFSLAYTGILVQRRNSQQQSSKCEVVSERDSSHSVVRDYVMTAHKDRN
KKEARVHDSPTDKSYEQGEDPSQSVHQQLEIQKRTSALLLDSLKNAALHLRRAMVLAHRG
SHWTTLQTVCQTAWDQNCRIAVLIQRAAQVKPPFPLTADQLHTTFTPLLVLSTDLIMDML
NRLGLWSLYDSDLTEEELESSLHFSGPLDDSTQVDLRWVRTLVLHTLERLHDSGKWESLA
HFALLFNSYTRERYALMVTPLLVLTQRRLLERISCFGGPAVPQPHHVKTEKATGKQVTYR
SYVGCQLLSGWTLQSLSRKKAPLTNLTPRDTIELKGAGMQHSMSLVCVPLDVEDTLRCYR
QALERRPHCLHVFQHSRSLLMLLLAYTQSCFAAQLRHCQSRSVSHSASLVDFSPMVMPTP
NIQPCDLTEEDYTTPKALYSLPVSPDHMPTVIAAYSTSIKYLEANSHDSLRVLALHEMGN
LHFYNGNTRAAYSYWSKAVDSALQNSGVVEKWDGVSFGGGTLQQILKQAGIWGCLQAAGL
TAKIAQYILTSDISQRTKCCLLSAHLFKCVLCCSLAQPQADLQYASHSIGDELLPGVDLF
SEPHRVHLGTTVTSLNFICHWLFTTGYHITLLPMLALYLYFVGTVCRDVQHFVEGKILKI
QALTELCLFTEAIKEAVQVIHGTGVCLPNGHYINQDNLQPLKTFHCSKSLLDNTEALEEL
VNCDIAPEVGTVYGSTLCLRFNLARIQLVLALSNTVYGPPLPEEACARSCSVTSEHHEQD
RLDCEGSCLKTEEPKVLALDSEKEKLTPGRIKFLLLEAASSLLPSIAQKLTSQPCSETEN
LELAIESKLLKANLFLQQGHASLSSEMAVSSLMLLQMSPLMMSGSMPGSEKPASGLPHAL
AESEQGTKDCTLSSPLHGDCSRAVEANERIGVALWLRCRLALFRSLAAQIPDTTVHSPGK
NINQGAARMLQEGLDECALWGDIDIRALLMVEGAKLEEHRGKTDDSMALLQEAVSLLSGR
ACMPPGSSVTLAQATLLLSDLRGTQSTTLLQLTQKLLQKQLSVFGESVVLDDGKNYFSPP
GPSNTYLPYLHILDETTLRIGRILDLSAMETLVPAQSSQSTSRQHLLQSSQIERDSQAPI
PLLSNSSTSSPTSPPCSAALR
NT seq
7626 nt
NT seq
+upstream
nt +downstream
nt
atggactttccagcatcttattatgggaaacttgacaaaagaaacccagttatttcagct
tttgaacgagacattaactcgtttataacgctgatgagacgtgtagcgtcctccaccagc
agcgacaacagctcgtatgctaaagggatcaaaatcctggtggagatatggagaaactac
aaacatcgactgccttcaaagttataccaagagcatatgttgcagattgcagattttctc
tgtggaattaagctgtaccagttggctctgtggcatggctacagtctccacctgctgcag
ttcagctcagtgaatataactgacatcacggatgtggaccacttaatgacttgcttcttc
cctgaaggttttgatacagaccaagatacccttgacatgaagatctgtgcaatgctgggc
tgtgtgcagtgtgtatttgagctggagaaagggcacagcatcctcggccagaagggactc
tgtaaactgctgcaagtgctgaacttcatcaggatcatgatgcaggcttttcagcaacat
gagcacctctgttggcatatatataatggttcgttacacatctacaacatctgccgttac
ctgatgaccatgaattgtagtgcacaggcactggagtaccttttgtgggcaagcatcagt
ttagagctgtcggtccctctgatgactgctaagtatctgccatggattgttacactctac
tgtgctgtctgccactgttactatgacaaccttgctacagtgcaggcagaggaatttgcc
aggagagcccttggaaaaatcaatgaccttgcagagctggagcagcagagcggagttctc
gccaccagagagacccagagagctttcaaagaagcctctatcaagctggcagccatgatg
ttcaagcgagcagtgttcgaggccaggaagagacccaaaaacatgttcagagtcaaaacc
aaaagcaccctgaaagacatacccaatgtgccatggcctcgtaacacaacagagcgcatg
ctaatgggcctgtttgacagtaaggcagcacaattcttgggaatcttggagacactctgg
gacagcaccaaacgccctctgcacacaagggtgtcagatgaaccagagctgcaggaactt
gtcctggagctcctgtcagctggcatcagtatattatctggaacggcaagtgcaagtgag
caaaagcgtgatgaccccccatgtatgtctctcagtgcaatgacatcaacatcccctcta
atggatttagccatcacaggagaaaacaaagtatccttcatgtctgcagtgaggttcatt
aagcttttgtttcagtacaaacagccagatgcattcacccaacttgctggagagatgctg
caggttttgtctggtgcggaaggtcagtcatacaggaaggcagaaacggagcttgctgtg
ctttacagtttcaacagtctgcagtcctctcagagaagtcatcctagagaggacagcata
atcaatgacagacacaagtcttcagtctcaatgagtgatgagttcattggcctggtagac
gccttgcacaaatctgtttgtggctttgctcctgaggtgcaaccggatggggacctggtt
ttggaagttgtgttatttctgtggggtaaggtgaaggtggtgatgcagaaggatcagctc
caaaactcaaactttgagaaggttgataattaccacaagtgggtgtggtgcctgtatatg
ctgtgtgaggtggcctttgcctttgaactagcaactgttgactgcataatgacagcagag
atgatccacacattggccatactgctagagagtgcagctgaacgcaataaacaaacgcac
tgtccagcagctcatgtagcagatgatgatggtgtgaagccaaactctttcactcttctt
cagaggtcaagtacagagctgctccagaaggtgtgtgaggtggttaaaaggggtcttgaa
gctctggcgaagggtgtagctacacttatgccccaaaattgctcttcaatcactgacttt
gccctcatgcaggaaaaagaagttgaaaccaaggcagaatcagatatcaaaagctctaga
cacactcagtccacatgtgtgtccctgctggcgacagacctccatctggaactacacata
atccactgcagggcatttctcaagttactgcagctaaatgcagttgtcgagtctgatctg
ttggatcagatcaagaagaacaaggtgtccaaagctcttttcctgatgcagaaagccttg
ctggtgtacaacagcatggaaccaaataaaaacagcaaaaccaagtttctgctagaggag
gcctcaaccctgatagagaaagcaggtgtagaggagagaaaactgtatatgtccaccacc
ccgaaggctccagctgaaaatcaagacaaagggttgaaggaggaaaaagaaaaccctcca
cctcccccgatcctactctcatgcactgaccactctttaacctttaccccagcaccttac
tacagggagggacaagtgtgctggtaccagctctgcggtcgagcagctgagggaattaac
aggaaagtccgccttggagactacagcctgccaggaactggaaatctggtaccagcagta
tctggtgagtgtgtgctgagggtggagggcctggaacccaaccagaagtatatgtttgct
gtagcagcctacaacagccagggcaagctactgggcaactccatcggagagacaacattc
ccgctgctagcatccatgccaacatcactgctttccacatgggctcacttggcacagatg
gcatttcaaacagagcagtacgacgtagcaaagagagcctgcagggaactgtggagccac
tataccttctccgacccacacagcacacgtgatagactcgctaccacagggctgcatatc
cagaccctgcaacactcgtctcctctcctgtgtcagttgttcctcacttccatcttcatt
gagacagagatcaacattcagcagggatcgctctattgtgattcaagcagtgacaatgga
ctgtttatctgggagcaggaagccagactggcagaatgtgaaagaatgctggtggccata
gacgtggcgatgtggttaagtgacagcagtgctgccttgcaagcagtagtaagctgttac
agcctcttggcccctctaatcttccatcagatcgcttgcgaccctgtagtacaagtgctt
acaaaatgcctgatagttttggaagagaattcagctcttctcaaacaaaaatggacagga
aacacttcagagtcactgatacacatgatagcttgcatcacttactacctgtctaaggca
ttacgtgtcctaaaggagcctcagagggcatctgcactgatggactgtggtcgtacactg
ctccaggatgtctttgatgcccagctgcagatcagtagagttgccaacaaagctgtgggt
cttaaggcactgcatgggaagaacaagataaggttcacatcagaggcagctgtttctcca
gaccatgagatttcacgcccactgactggctgtgaggatcctgctgtactgtacgatcgg
atctccagcagcacattaaaggatgcctatcaagacgtgatgaagctcagacgcaaggca
tatttcattgagtttgctgcactactaatccagagaaccatggaagaaggccatacagac
cttgtgttaaagtgggggcaaaccatactcgaatttctttgcagacgtgatgaggtgatg
ggactgtccacaaagtgtttggagggaaacggtcagagtaaaagaaagagtagtgttcag
actctgaaaggaaatgaaccaccccagaacaagaacacatcttctcatgatgatgtgaga
aaaagactaaagcagaaaatgccacccagcatgcttcagaaagtgagaactaacagggag
atgcaggctgtggagaacctgctgaccttgttgtcgtctgtggtgcaacgccacaagaaa
cagtttcagctcaggaacatgtgctgtgaggagagagtgtggaagtcacacctcaactac
agcttggctcacgcacatttagcagttttttatcaggcactgaaccagctgcttggagga
gacctacagcacaggtacagccagttaaatccattgtgtttctctctggcctacactggt
atccttgtgcagcggaggaactcacaacaacagtcctctaaatgtgaggttgtctctgag
agagactcctctcactccgttgtcagggattatgtgatgactgcacacaaagacagaaac
aaaaaggaggctagagttcatgactctcccacagataagagttatgagcagggagaggac
ccctctcagtctgttcaccagcagttagagattcagaaacgcacttctgccttgctgctg
gactcacttaaaaatgctgctttacatcttcgaagggccatggtgttggcccaccgtggc
agccactggaccactctgcagactgtgtgtcagactgcatgggatcaaaactgcagaatt
gctgtattaatacagagagctgctcaggtcaaacctcccttcccgcttacagcagaccag
ctgcacaccactttcacccctctacttgtgctgtctactgacttaatcatggacatgcta
aacagactagggctgtggagtttgtatgatagtgacttaaccgaggaggagctagagtcc
agtcttcacttctcaggcccgcttgatgacagcacacaggtggacctgcgttgggtccgc
accttggtgttgcacactctggagcggctccatgacagtggcaaatgggaaagcctggcc
cactttgccttacttttcaactcatacacacgtgagcgttatgccttgatggtaactccc
ctactagtcctcactcagaggagactgcttgaaaggattagctgttttggtgggcctgca
gtcccacaacctcaccatgtcaagacagagaaggccactggcaagcaggtaacttacagg
agctacgtaggctgccagctgctcagtgggtggaccctacaatctttgagccgcaaaaaa
gcaccactcacaaaccttacgcctcgagacacaattgagcttaaaggtgcagggatgcag
cactccatgtcccttgtgtgtgttcctttggatgtggaagacacactgcgctgttaccgt
caagctcttgagagaagacctcattgtcttcacgtcttccagcatagccgctcattactg
atgctgcttctagcatacacacagtcttgctttgcagcacagttgcggcactgtcagagc
agaagtgtcagccattctgcaagcctggttgatttcagtcctatggttatgccaactcca
aacatccaaccttgcgacctgacggaggaggactacactactccaaaggctctctacagc
ctccctgtcagccctgaccatatgcccactgtcattgctgcatactccacatcaattaag
tatctcgaggccaacagccacgactccctcagagttttggcactgcatgaaatgggaaac
ctgcacttctataatggaaacacacgggcagcatactcatactggagcaaagctgtagat
tctgctttacagaactcaggtgtggtagagaaatgggatggtgtgtcctttggtggtggc
accctgcaacaaatcctgaaacaggctggcatctggggatgtctacaggctgctgggctc
actgctaagattgcacagtatatcttaacttctgatatcagccagcggaccaagtgctgt
ctcttgtctgctcacctctttaagtgtgtgctgtgttgctccctggctcagccccaggcc
gacctacagtacgcttcccacagcattggagatgaactgctccccggagtcgaccttttc
tcggaaccccacagggttcacctcggcaccactgtaaccagcctcaactttatctgtcac
tggcttttcaccacaggctaccacatcacgcttctgcccatgctggccctttacctatat
tttgtgggaactgtgtgcagggatgtacaacactttgttgagggcaaaatacttaagata
caagctcttactgaactgtgtctgttcactgaagctataaaagaggcagttcaggtaata
catggaacaggggtttgtctgccaaatggacactacatcaaccaagacaatctccaacct
ctgaagacgttccactgcagcaagtctctcttggataacactgaggctttggaagaactt
gtgaactgtgacattgctccagaggttggcacggtgtatggatccacattgtgcctgcgt
ttcaaccttgcccgtattcaactagtgcttgctctcagtaacactgtatatggccctcct
ctgccagaagaagcttgtgcccgaagttgttcagtgacctcagaacaccatgaacaggac
agactggactgtgagggctcctgcctaaagacagaggagccaaaagtgctggctcttgat
tcagagaaggagaagctcactccaggaaggattaagttccttttgctagaagcagcatcc
tccttgctgccctccattgcgcagaagctcacatctcagccctgtagtgaaactgagaac
ctggaattagcaattgagtccaaacttctaaaggccaacctcttcctgcaacaaggacat
gcttcacttagttctgagatggcagtttcatcattgatgctgctgcagatgtcaccttta
atgatgagtggatccatgcctggctctgagaaacctgcgtctgggctcccacatgccttg
gctgaaagtgaacagggtactaaagattgcactctgtcaagtcccttgcatggagactgt
tccagagcagttgaggccaatgagagaattggagttgctctgtggctacgttgccgcctg
gctctgttccgcagcctggctgcacagatccctgacactactgtccattccccaggtaag
aacattaatcagggagcagctcggatgttacaggagggtcttgatgaatgtgcactatgg
ggagacatcgacattcgagcccttttgatggttgaaggtgcgaaattagaggaacacaga
ggcaagactgatgacagcatggcactactgcaggaagcagtgagcctgctgtcaggaagg
gcgtgcatgccaccggggtcaagtgtaactctggcgcaggcaactttgctgctcagtgac
ctgagaggaacacaaagtaccacacttctacaactgacacagaaactactacaaaagcag
ctttcggtttttggtgagagtgtggtgttggatgatggaaaaaattatttttctcctcct
ggaccaagcaacacatacctcccttacctccacatactggatgagaccactttacgaatt
ggtcgcatcctggatctcagtgccatggaaacgctcgtccctgcccaatcatcacaatcc
acttccaggcagcatttactccagtccagccagattgagagagactctcaggcaccaatt
cccttgctaagcaactcaagcacctccagtcctacaagtcctccatgctcagctgctttg
agatag
DBGET
integrated database retrieval system
