Scomber scombrus (Atlantic mackerel): 133994434
Help
Entry
133994434 CDS
T10651
Name
(RefSeq) FRAS1-related extracellular matrix protein 2-like
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04512
ECM-receptor interaction
Brite
Lectins [BR:
ssco04091
]
C-Type lectins
Lecticans
133994434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133994434
NCBI-ProteinID:
XP_062289671
LinkDB
All DBs
Position
14:complement(14754282..14814517)
Genome browser
AA seq
3165 aa
AA seq
DB search
MSAVLPTGNKAELTSPQNPPIWTEMGGSTSTQAIKCLKLKLLSAFLAEHVEGLHGQMLTG
IVFAQPDSSGLFYALRSELSEDAILVANNGIRVPFGRSVFIDPINDLVIQTQPGDRCSIT
VLDNDPLSQRPGHLSPKKFPCDFGPNEVTYSHYGSRSPAKDRVRLQLRYDAQTETVIIPF
MMEVEVVFTQLELLTKNMPLTVDNLKGMSNPIDKKILEFTYVRDSHKCEVTSLSSSSQLP
RYGRLIDGGKLSKMMDCDEFTQADIRYEHTFERKSPNRDYVPMVVELHDKEGNLVKQEYF
HLMIRIKEGEENTPPKPSFVSMMMMEVSQFVMIALTPDMLAAEDAESDPDELIFNITSPL
SYEEGYIVSTDDRNLPITSFYQRDLRDLKIAYKPPSLDSDTERIFQLEFEVVDTDGAISD
PFAFMIVVKPMNSLAPVVTRNTGQLLYEGQSRPLFSAHNLEISDEDDLDSVTLTVVDGLR
HGDLMVFGSHRKFFTPADLAIGIVVYQHDGSDTYSDNIVFKMTDGKNEVEFLFPITIVPT
DDEPPIINANTGLVLFKNQMMHISPLMLSAADIDSEDSTIKFTIVPPFSTIGTVLLRQSD
APEDPSSWKFNAEDEMYEKEVTEWLQKDITDGKLFYKHIGPHNTDTVMDQFVFTVQDDND
PPNESGENAFIIRVLPIDDVPPELFPGTTLQMTVQEYKLTHFSKEFLRYTDLDSEDRDLK
YTVIQPPTDTDENNPVAFGSLVLTDSLDTEVTEFTQAQINHHKISYSPPDVELGITAHVV
QFRYTVEDTAGNSAEGAFTIYLQPVNNKPPQITNTGFTVLERGMHIITIAELDTTDLDTK
SEQITFTLSQPPKHGQIQAAFTVLEKKGAFKLEDISEGKISYIHGGEETMSDEFQLDVSD
GIHVVTVTVKVNVKPVDDETPTVSLPAGTIGSHMDVLENGATEITTNVIQGHDDDTDDLQ
LTFIVEDPPVMGEILVKGVPATRFTQSDIINGVVVYAHTGGEIGLNSQQDGFNLTLTDMS
DDWTVGGNKVNGVHVRVTILPVDSQAPEVGVGIQFSVIEGEKYAIGPQHLNADDNDTPTD
DILCTIIVQPSAGYVENISPAPGSEKSRSGTAISAFTIKDIREGNIYYVQSIHKGVEPVE
DRFTFRCSDGINFSENHFFPIVIIPSNDEKPEIYLREIVVMEGMNIVIDTPILNGADADI
PPEELMFIISKPPKHGAILNQLSTGSVLVTNFTLEQIREASSIIYEHDDSETTEDSFDVT
LTDGKYSVQKTAMVMIIAVDDETPRMAINDGLEVEIGETKEINNKMLKATDLDSDDGTLT
YIMRFGPGQGLLHRKTASGSLENITVGMNFTQAEIDEGVILYTHSGQEGIRDLVKFDVTD
GINSLIDRYFYITVGSIDMVFPDVVSKGVSLKEGGRVTLTTDLLSTTDLNSPDENLVFTI
TRAPVRGHLECTDTPGMPIVSFTQLELAGSKIYYIHTSDDELKMDSFEFEVTDGYNPIFR
TFRISIVDVDNKKPVVTVNGLLVTEGQDKLITPFELTAEDQDTAEKLLKFTVTQLPVHGK
LLYNQSRHITSFTKQDLNENLISYKHDGTESSEDSFSFTVTDGTHTDFYVFPDTVFETRR
PQTMKITIVAMDNGVPQIVVNKGAPTLKILATGHLGFPISSKALRAEDRDSSPASLVFHI
TTQPKHGYIINLGQGNNSINTFSQADIDDINICYVLGNEENATSDVFHFSVEDNGGNKLK
GQQFRLDWSWISLDKEYYVVDEEDKFLEVVIRRRGYLGETSFISIGTQDGSATKDEDFKG
KSQRQVQFNPGQTSAMWRVRILTDGKYEQAETFQILLSEPVMGVLEFPATATAEILDPND
ESTVFFPEQIHSVEEDIGELFIPVHRSGDISEELMVVCYTQQGSASGTIPTTVLSYSDYI
SRTEEHSSILRFDKGEREKHCRVVIIDDSLYEGEENFNITLSLPVGGRLGMHYPTAKVNI
LEDMDDAPVFYFGEVEYHVDESDGYVEVKVWRTGTDLSKTGTVTVRSRKAEPVSAEAGID
YVGISRNLDFAPGVSMQTFRVTILDDLGQPELEGTESFDLVLRMAVNGILGEPGKASVLI
NDSVSDLPKVQFREPVYIGEEHDRQIAATVYRNGDIRHKSTVRCYTRQGTAQVVSDFDER
PNTDASIITFLPGEAEKQCILSLVDDTLYEEGEELRLVLGNPKSDSQFGASVGVLNEALV
KIKDTADKPIIRFVETKFSVSEPKEASSVATVRIPVVRVGDTSKVSIVRVHTKDGSAVSG
EDYYPVSQDIEFKQGDKEHVVEVEVLYDGVREMREALTLHLKPDENMVAETQVTKVIVYI
EETNSMADVTFPSLPHVVSLLHYDDVARTPDNLHPPAGYPVICVTACNTKYPDYDKTGSI
CVSEHINNTLTRYRWLISAPAGPDGVTSPMREVDFDTFFTSSKMITLDSVYFQTGSRVQC
AARAVNSNGDEGLELSSPIVTVSQQEGMCQPRKMGTVGAEPFSAKLRYTGADDPKHPNLI
KVTVTMPHIDGMLPVISTRPLMNFELTLSPDGTRVGNHRCSNLLDYNEVTTGHSFITAST
RNPESMGDTAPYQFSSTLRGNSTLRFYRNLNLEACLWEFTSYYHMSELLTDCGGTIGTDG
QVLNLVQSYVTLRVPLYVSYVFHSPVGTGGWQHFDLQSELRLTFVYDTAILWKDGIGSPP
QAELQGALYPTSMRINEQGRLVVNFRTKARFRGLFVESHSGATSMSSMVMSVDHPGLTFN
LTLVRSEPTYNQPVQQWTFTSDFAVRDYSGTYTVKLIPCTTAQNMEYTVPPVCSPREPIT
FDLDIRFQQVSDPVAVEFSLNTQMFLLSKRSLWLSDGSMGFGQESDIAFSEGDTIYGRVM
VDPVQNLGDSFFCSIEKVFLCTGADGYVPKYNPTKFEFGCLADSPSLLYRFKILDKAQPE
TQARVFGDVNFNAVLAVDDPSAMSLVRQPGSDGFRVDSTAMFQVAAGREWYIHTIYTVRS
KENANRGIGKRSLEYHSLVSTSNDLALTPTSGKGHRSRRSVGVEVPEITEDINADNNRGT
NIMHITLDRTKRRAGGSNELLSDGLEPSELNSEEEEEGLVTVVGALVGLLLTVLIIVTLV
LVLRSRQKDGKEGWREGVQEVVKGSISTEPMLVVRMQDCHNSSEV
NT seq
9498 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctgtactgcccactggcaataaggctgaactaacaagccctcaaaatcctcca
atatggacagagatgggcggtagcacttctacgcaggctatcaagtgtctcaagttaaaa
ctcctgagcgcttttctcgctgagcatgtcgagggactgcacggacagatgctaacaggt
attgttttcgcgcagcctgacagctctggattattttacgcactgagatctgaactgtca
gaagatgcaatcttggtggccaacaacggaatacgtgtgcctttcgggagatccgtcttc
atcgatcccatcaatgatttggtgatccagacacaaccgggagaccggtgcagcatcacc
gtcttggataatgatccgctctcacagagaccggggcatctctctcccaaaaagtttccg
tgtgatttcggtcccaatgaagtgacatactcccactacgggtccaggagtccagctaaa
gacagagtgaggctgcagctcaggtatgacgcgcaaactgaaaccgttattatcccgttt
atgatggaggttgaggtagtttttacgcagctagagttactcaccaaaaacatgcctctc
actgttgataatctcaaagggatgagtaaccccatagataagaagattttagagttcaca
tatgttagagactctcataaatgcgaggtgacgtccctttcaagcagcagccagctgcct
agatatggaagactcattgatgggggcaaactttctaaaatgatggactgcgatgaattc
acacaggctgacatccgctatgagcacacgtttgagcgcaagtctcccaacagggattat
gttcccatggttgtggagctgcacgataaggaaggcaacctagtgaaacaggaatatttc
catctcatgattcgcatcaaagagggagaggagaacactccccccaagcctagctttgtg
tccatgatgatgatggaagtcagccagtttgtcatgattgccctcacccctgatatgctc
gctgctgaggatgcagagtcagacccagatgaacttattttcaacatcacctctccctta
tcttacgaggagggctacatagtcagcactgatgatagaaatctccccatcacatccttc
taccagagagacttgcgtgatctgaaaatagcttacaagcccccctccctggactcagac
actgagaggattttccagcttgagtttgaagtggtagacacagatggggccatctctgac
ccctttgcttttatgattgttgtgaaaccgatgaactctttggccccagttgtgacacgt
aacacgggtcagctactgtatgagggtcagtccaggcctctctttagcgcccacaacttg
gagatcagtgatgaagatgacctagatagtgtcaccttaacagtagtagacggcctgcgc
cacggggacctcatggtgttcggttcacacaggaaattcttcacacccgctgaccttgcg
atagggattgttgtgtatcagcacgatgggagtgacacatacagcgacaacattgtcttc
aagatgacggatggtaaaaacgaagtagaattcctctttcccattacaattgttcccact
gatgacgagccacctattataaatgccaacactggccttgtgctatttaaaaaccaaatg
atgcatatatctcccctcatgctcagtgctgctgatattgactctgaggactcaactatt
aaattcactattgttcccccattttccacaattggcactgtgcttctaaggcagtcagat
gccccagaggacccctcctcctggaagttcaatgctgaggatgaaatgtatgagaaagag
gtgacagagtggctgcagaaagatatcactgatgggaagttgttttacaagcacataggc
ccccataacacagacactgttatggatcagtttgtgttcacagttcaggatgacaatgac
ccccctaatgagtcaggagaaaatgcgtttataattagggttttacctatagatgatgta
ccccctgagcttttccctggcaccaccctgcaaatgactgttcaggagtacaagcttaca
cactttagcaaagaatttctgcgctacactgatttggactctgaggaccgtgacctcaaa
tacacagttattcagcctcccacagacacagatgaaaacaacccagttgcgttcggctct
ttagtcctgacagacagcctcgacacagaagtcactgagttcacacaagctcaaattaat
caccacaagatctcctatagccccccagatgttgaactcggaatcacagcccatgttgta
cagtttcgttatactgttgaagacacggctgggaacagcgcagagggggctttcactatc
tacctccaacccgtcaacaacaaaccccctcagattactaacacaggcttcacagtgctt
gaacgtggtatgcacatcatcaccatcgctgagcttgataccacagacctcgacacaaag
agtgaacagattacctttacacttagccaacctcctaaacatggccagatccaggcagca
ttcactgtcctagagaaaaaaggggctttcaaactcgaggatatctcagaggggaagata
tcatatattcatggaggggaggagacgatgagtgatgaatttcagctggatgtcagtgat
gggattcatgttgtaaccgtgacggtcaaagtcaatgtaaagcctgtcgatgatgaaacg
ccaactgtcagtttgcctgcgggaacaattgggtctcatatggatgtgctggaaaacgga
gccacagaaatcacaactaatgtcattcaaggccatgatgatgacacagacgacctccag
ctgacctttattgtagaagatcccccagttatgggtgaaatcttggttaaaggagtgcct
gccactaggtttacacagtctgatattattaacggtgtggttgtgtatgcacacacaggt
ggtgagatcggtctcaactctcagcaggatggttttaatttgactctgacagacatgtct
gatgattggacagtaggtggcaataaggtcaatggagtccatgtccgagttactattctc
cctgttgacagccaggcccctgaggttggagttgggattcaattcagtgtcattgaaggg
gagaaatacgctatcggccctcaacatttgaatgcagatgataatgacactccaacggat
gatatcctttgcaccatcattgtccaaccctccgccggttatgtggaaaatatatcacct
gccccaggctcagaaaagtccaggtcagggacagctatcagtgcttttaccatcaaagac
atcagggagggaaatatctattatgtgcagagtattcacaaaggggtagagccagtggag
gacaggttcacatttaggtgctctgatggcataaatttctcagaaaatcattttttccca
attgttatcatcccttcaaatgatgaaaagccagagatttatttgagggagatagttgtg
atggaggggatgaacattgtcatcgacactccgattctgaacggggccgatgccgatatc
ccacctgaggagctgatgtttataatttccaaacctcccaaacatggtgctattttaaat
cagctatccacaggttctgttttggtgactaatttcactttagagcagattagggaggca
tcaagcattatttatgagcatgatgactcagagacaacagaggacagctttgatgtcact
ctgacggatgggaagtactctgtgcagaaaacagccatggttatgattattgctgttgat
gacgagacccccagaatggcaatcaacgatggcctagaggtagaaataggagagaccaaa
gaaatcaacaacaaaatgctcaaagcaacagatttagattctgatgatggtacgctcaca
tatattatgcggttcgggcccggtcagggtctcctgcataggaaaacagcatctgggtct
ctggagaatatcacagtaggcatgaatttcacacaagctgaaatcgatgaaggggttata
ctttacacacacagtggacaagagggcattagggacttggtcaaatttgatgtcacagat
ggaattaactcactaattgatcgttacttctacattactgtgggcagtattgacatggtc
ttccctgatgtggtcagtaaaggcgtgtctctgaaagaaggtggtcgtgtgactctgacc
acagatcttctcagcactacagaccttaacagccctgatgagaacctggtcttcaccatc
acaagggcaccggttaggggccacttggagtgcacagacactcctggcatgcctatcgtg
tcttttactcaactcgaactcgctggcagtaagatctactacatccacacctcggatgat
gaattgaaaatggacagttttgagtttgaagttactgatggctacaatcctattttcaga
acattcagaatctctattgtggatgttgacaataagaaacctgttgtgactgtaaatggt
ctgcttgtcacagaaggacaagataagctgattacaccatttgaactcactgctgaggac
caagacacagctgagaagctgctaaaattcactgtcacccagctgcctgttcatggtaaa
ctcctctacaaccagtccaggcacatcaccagcttcactaaacaagacctcaatgaaaac
ctcattagctacaaacatgacggaacagaatcatcagaggactccttctcttttacagtc
actgatggcacacacactgacttttatgttttccctgacactgtttttgagactcggcgc
cctcaaaccatgaagatcaccattgtggcaatggacaacggtgtcccccagattgtggtg
aataaaggtgcccccactttgaagattttggccacaggtcacctgggattccccatcagc
tccaaagcgctaagagcagaggacagagacagcagcccagcctccctagtgttccacatc
actacccagcccaaacatggctacatcattaacctgggacaaggaaacaactccatcaac
acatttagtcaagctgacattgatgacatcaacatctgctatgtgttggggaatgaagaa
aatgctacatctgatgtcttccacttctctgttgaggataacggtgggaacaagctgaag
ggacagcagttccgtctggactggtcctggatctctctggataaagagtactacgtggtg
gacgaggaggacaagttcctggaggtggtcatcagaaggagaggctacctgggagagacg
tctttcataagcattggcacccaggatggtagtgcaacgaaagatgaggatttcaagggt
aagtcccagaggcaggtccagttcaacccgggacagacaagcgccatgtggagggttcgg
atcctgactgatgggaagtacgagcaggcagagaccttccagattttgctatcggagcca
gtgatgggagtgctggagttccctgctacagcaacagctgagatcctggatcccaatgat
gagtcgactgtgttcttccctgaacagatccactcagtagaggaggatattggggagctt
ttcatcccagtgcaccgcagtggagacatcagtgaggagctcatggtggtctgctacact
cagcagggctctgcctcagggacgattcccaccactgtcctgtcttactcggactacata
tcccgcaccgaagagcatagcagcatccttcgtttcgacaagggtgagagggagaagcac
tgtcgcgtggttatcattgatgactctttgtacgagggagaagagaatttcaacatcaca
ctgtcactgcctgtcggggggcgtctgggaatgcactaccccaccgccaaagtcaatatc
ttggaagacatggatgatgccccagtgttttacttcggagaggtggagtatcatgtcgat
gagagtgatggatatgtagaggtcaaagtgtggaggacaggaactgatctttctaaaact
ggcactgtcactgttcgctcccgcaaggctgaacctgtctcagcagaagctggtattgac
tacgtgggcattagccgtaaccttgactttgctccgggcgtcagcatgcagacgttcagg
gtcaccattctggatgacctgggacagccggagctggaggggactgagagctttgacctg
gtcctacgtatggcagtgaatggaatcctgggagaacctgggaaggcttcagtattaatc
aatgattctgtgtctgacttgcccaaggtccagttccgtgagccggtgtacattggagag
gagcacgaccgtcagattgcagccacagtgtaccgcaatggtgacatcagacacaaatcc
actgtccgctgttacacccgtcagggaactgcacaggttgtctctgacttcgacgagcga
cctaatacagatgcatccatcatcactttcttaccaggtgaggcagagaagcagtgtatt
ctgtcactggttgatgacacactgtacgaggaaggagaagagctgcggttggtcttagga
aacccaaaaagtgattcacagtttggtgcatcagtgggagttttgaatgaggccctggta
aaaatcaaggacacagctgacaaacccatcatccgttttgtggaaaccaagttcagtgtt
agtgaacccaaggaggccagctccgtggcaactgtgaggatccctgtggttcgagtgggt
gacacatcaaaggtatccattgttcgtgttcacaccaaagatgggtcagcagtctcagga
gaggactactaccccgtgtcccaagacattgagttcaaacagggcgacaaggaacacgta
gtggaggtggaggtgctgtacgatggggtcagagagatgagggaagccttgactcttcac
ctgaagcctgatgaaaatatggtggctgaaactcaggtaactaaagtgatagtttacatt
gaggagaccaacagcatggctgatgtcaccttcccctctctgcctcatgtggtgtcgctg
ctccattacgatgatgtcgccaggacaccagataatctccacccaccagctggttacccc
gtcatctgtgtcacagcttgcaacacaaaatacccagactatgacaagacgggctctatc
tgtgtcagcgagcacatcaacaacaccttgacccgctaccgctggctcatcagcgcccca
gctggccctgatggcgtcaccagtcccatgagggaggtggactttgacactttctttaca
tcctccaagatgatcacattggactcggtctacttccaaacagggtccagggttcagtgt
gctgctagggctgttaattctaacggggatgaaggtttagagctcagcagccccattgtc
actgtcagccagcaggaaggtatgtgtcaaccacgtaaaatgggtaccgttggtgctgag
cctttctctgccaagctccgctacactggagcagacgacccgaaacaccccaacctcatc
aaagtgactgtcaccatgcctcacatagatggcatgcttccagtaatctccactcgccct
ctcatgaactttgagctgactctcagtcccgatggtacccgggttggaaaccaccgctgc
tccaacctgcttgactacaatgaggtcaccacaggtcacagcttcatcaccgcttcaacg
cgcaaccctgaaagcatgggagacacagcgccctatcagttcagtagtactctgcggggg
aacagcacactgcgcttctacaggaatctcaacctggaggcctgtctctgggagttcacc
agctactatcacatgtctgagctgctcaccgactgtggaggcaccatagggactgatgga
caggtgctgaacctggtccagtcttatgtgaccctgcgggtgccgctttatgtttcatat
gtgttccactcccccgtcggcacgggtggctggcagcactttgacctgcagtcagagctg
cgcctcacttttgtatacgatacagccatcctctggaaagatggaatcggcagccctcca
caggccgagcttcaaggtgcgttgtatcctaccagtatgcgcatcaatgaacagggacgt
ttggtggtaaattttcgcaccaaggctcgtttcaggggtttgtttgtggagtctcactct
ggagcaacctccatgtcatccatggtgatgagtgtggaccaccctggcctgacctttaac
ctcaccttagtgaggagtgaacctacttacaaccagccagtccagcagtggacctttacc
tctgactttgctgtgagagactactcagggacctacacagtgaagcttatcccatgtaca
accgcacagaatatggaatacactgttccacctgtctgcagtcccagagaaccaatcacc
tttgacctagacatcagattccagcaagtgagtgacccagttgcagtggagttcagtctg
aacactcagatgttcttgctgtccaagaggagcttgtggctctctgatggctccatgggt
tttggtcaggaaagtgacatagccttttctgagggtgataccatctacggtcgtgtcatg
gtggacccagtgcagaacttgggagactctttcttctgtagcatagagaaggtgttcctc
tgcacaggtgctgatggatatgtaccgaagtacaacccgaccaagtttgaatttggctgc
ctggctgactctccgtcattgctctatagattcaaaattcttgacaaagctcagccagag
actcaggcgcgtgtgtttggtgatgtcaattttaatgctgtgctggcagtggatgatcca
tcagccatgtccctcgtcagacagccagggtctgacggctttagagtggactctacagcc
atgttccaggttgctgctggtcgtgagtggtacatacacaccatttacacagttcgttcc
aaagagaatgccaacagaggtattggaaagcggagcctggagtaccactccttagtttcc
acaagcaatgatcttgctttgaccccaacaagcggcaaaggtcatcgctccaggaggtca
gttggcgttgaagtcccagagatcactgaggatatcaacgcagacaacaaccgaggcacc
aatatcatgcacatcactttggaccgcaccaagcgacgggcaggggggtcgaatgagctt
ctctccgatgggctggaacctagtgagctgaattcagaggaggaagaagagggcctggtg
actgtggtgggggcgctggtagggttgctgttgactgtcctcatcattgtcacccttgtg
cttgtgctgagatccagacagaaggatggtaaggaaggatggagagagggcgtgcaggag
gtggtgaaagggtctattagtacagaacccatgttggtggtcaggatgcaagactgccac
aacagctcagaggtctga
DBGET
integrated database retrieval system
