KEGG   Scomber scombrus (Atlantic mackerel): 133994546
Entry
133994546         CDS       T10651                                 
Symbol
larp1
Name
(RefSeq) la-related protein 1 isoform X1
  KO
K18757  la-related protein 1
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ssco03019]
    133994546 (larp1)
Messenger RNA biogenesis [BR:ssco03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     133994546 (larp1)
SSDB
Motif
Pfam: LARP1_HEAT La SGP MRJP
Other DBs
NCBI-GeneID: 133994546
NCBI-ProteinID: XP_062289831
LinkDB
Position
14:complement(22621449..22677938)
AA seq 1113 aa
MATQVEALLPGNPLAKAEEHGEVIRGEPEVEERGRGDGAKPETGVAEQGSSGGGCCPGQG
GTHGDTAEEQTPKEATEGGKEDCDSGDKQNEEGVKGSSRKEFTEAPPPKVNPWTRKMNAV
TVVSVNGQAHHESTGPAKVVRAGNPPKARRGGKVGDFGDTNSWPTPGEIATKDMQIEAVT
RTVSCPPTVRQVRDSWRFTGPKRTTVKKELKEKRESNEESKENLKAKSDDSGEEKNGDDD
SQKNGPKKKGNKQKWVPLMIEVKSEGPRERSASRNNSRQNENPRLPPNARNDLRDWHSQK
YEREWRDDHDEVSSVKSEGAPFRGGFRGRGRGRGRGRGRGRGGRGHYDYHYGYKSYDMKD
GPYGQKFSNSVTYYYDNMSSSDLYSVDQDLLKDYIKRQIEYYFSLDNLERDFFLRRKMDQ
EGFLPVGLVASFHRVQALTTDVNTIMEALKDSKEVEVIDMKIRRKVEPEKWPLPGLTMPN
QTHTDFSQLINCPEFVPRQITEEPRGSPRSSTPVKYQTKTESDISNLKTMPKGLSASLPD
LDSESWIEVKKRPRPSPARPKVSTEKAPSLQQQKEKDDLNRSPVPQSGSSSSPAAPGNKG
GAEQDEPEELDFMFDEEMEQMDGRRNTFTDWSDEETDGEIDDHDVNKILIVTQTPPYLRK
HPGGDRTGHHTSRSKLTNELVKVINDGLFYYEQDLWDDTYEPEYATIKQEVENFKKVHLI
SREEFDCLTPEPPVDPNQEVPPGPPKPHQIPTDALANKLFGVPEPSSIARSLPTTVPDSP
NYRSARTPRTPRTPHRKDATMTPRFYPVVKEGRPVDAKTPRKRKTRHSSNPPMECHVGWV
MDSREHRSRTASVSSNASPSEGTPALGNIGCTPQSLPKFQHPSHELLKENGFTQHVYHKY
RRRCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNRKMYEEFRQLVVEDGKEGYRYGLEC
LFRYYSYGLEKKFRPDIFKDFQEETMKDYEAGQLYGLEKFWAFLKYSKIKTLEIDPKLHD
FLRKFKRLEDFRIDPPMEDGGRRRHSSSGDGRRRHPSLPSSRPHSQASSGPSPALTTQGP
ALTTQGPAAKDDAKPACQRALAVDLAPDAKTLK
NT seq 3342 nt   +upstreamnt  +downstreamnt
atggccactcaggtggaggctctcctgcccggcaacccgcttgccaaagcggaggagcac
ggcgaagtgatccgtggcgagccggaggtggaagagaggggccggggcgacggggccaag
ccagagacgggtgtcgccgaacaggggagcagcggcggcggctgctgccccgggcaggga
ggcacccacggcgacacggctgaggagcagaccccaaaagaggcgacagaggggggcaag
gaggattgtgacagcggcgacaagcaaaacgaggagggtgttaaaggcagcagcagaaag
gagtttactgaagctcccccgcccaaggtgaacccgtggacgaggaaaatgaatgcggtg
accgtggtcagcgtgaatggacaagcacaccacgagtctaccggccccgccaaggtggtg
agagcagggaatccacccaaggccaggcgtggaggaaaggttggagattttggtgacact
aacagctggccaactccaggggagattgcgactaaagacatgcagatcgaggcagtgaca
cggaccgtgtcctgcccgccgactgtcaggcaggtcagagactcatggagattcactggc
cccaagaggacaacagtcaagaaggagttaaaggagaagagagagagcaacgaggaaagc
aaggagaacctgaaggctaagtcagatgactctggagaggagaagaacggcgatgatgac
tcccagaaaaatggaccgaagaaaaaaggaaacaagcagaagtgggttcccctgatgatc
gaggtgaagtccgagggtcccagggagcgctcggcctccaggaacaacagcagacaaaac
gaaaacccccgtctgcctcccaacgccaggaacgacctcagagactggcacagtcaaaag
tatgagcgggagtggcgcgacgaccacgatgaggtgtccagtgtgaagagcgagggggcg
ccgttccgcggagggttcagaggtcgcggacgcggtagaggaagaggccggggacgaggc
agaggcggtagaggccactacgactatcactacggctacaaatcctacgacatgaaagac
ggaccctacggccagaagttcagcaactcagtgacctactactacgacaatatgagcagc
agcgacctttattccgtcgatcaggacctgctgaaggactacatcaagaggcagattgag
tactacttcagcctggacaacctggagcgcgacttcttcctgcggaggaagatggatcag
gagggcttcctgcccgtcggactcgtcgccagcttccacagagtgcaggccctcaccacc
gacgtcaacaccatcatggaagctttgaaggacagtaaggaagtggaagtgatcgacatg
aagatccgtcggaaggtggagccagagaagtggcctctgccgggcctgaccatgcccaac
cagacccacaccgacttctctcaactcataaactgcccagagtttgttccgagacagata
acggaggagcccagaggttctcccaggtcctccacacccgtgaaataccagaccaagact
gagtcagacatctccaaccttaagacgatgcccaagggcctctctgccagcctccccgac
ctggactcggagtcctggattgaggtcaagaagagacccagaccttccccagctagaccc
aaggtcagcacagagaaggccccctcgttgcagcagcagaaggaaaaggacgatttgaat
cgctctccggtgccccagtctggctcctcatcctcgcccgctgccccaggaaataagggg
ggagctgaacaggacgaaccggaggagctcgacttcatgttcgacgaggagatggagcag
atggacggacgtcgcaacaccttcaccgactggtcggacgaggagacggacggtgagata
gacgaccacgatgtcaacaagatcctgatcgtgacgcagacgccgccttacctgaggaag
cacccggggggcgaccgcaccggacaccacacatcgcgttccaagctgaccaacgagttg
gtcaaggtgatcaacgacgggctcttctactatgagcaggacctgtgggacgacacatac
gagcccgagtacgccaccattaagcaagaggtggaaaacttcaagaaggtccacctgata
agccgcgaagagtttgactgcctgactcccgaaccccctgtggaccccaaccaggaagtc
cccccaggacccccaaaacctcatcagatccccacagacgctctggcaaacaaactcttc
ggtgtcccagagccctcctcaatagcacgctcgctcccaactaccgtgcctgactcgccc
aactaccgcagtgcccgtacaccccgcacgcctcgcacccctcataggaaggacgccacc
atgacgccacgcttctacccagtggtgaaggaaggccggcctgttgatgccaagacgccc
aggaagaggaagacccgacacagctccaacccgcccatggagtgtcacgtcggctgggtg
atggactccagagagcatcgctcccgtaccgcctctgtcagctctaacgccagcccatca
gagggcactcccgctctgggtaacattggatgcacgccccagtccctccccaagttccag
catccatcccacgagctgctcaaggagaatggcttcacgcaacacgtttaccacaagtac
cgccggcgctgcctaaatgagcgaaagcggctgggaatcggccaatcgcaggagatgaac
acactgttccgcttctggtcatttttcctgcgagatcacttcaacaggaagatgtatgag
gaattcagacagctggtggtagaggacgggaaagaaggatacaggtacggtttggagtgc
ctgttcaggtactacagctacggtctagagaagaagttcaggccagacatctttaaggac
ttccaggaggagaccatgaaagactacgaagctggccagctgtatggactggagaagttc
tgggccttccttaaatattccaaaatcaagaccttggagatcgaccccaagctgcatgac
tttctgaggaagtttaaacgtctggaagatttcagaattgacccgcctatggaggacgga
ggccgcagaagacactcatccagcggggacggtcgtcgccggcatccctctctgccctcc
agccggccccacagccaggccagctcaggacccagccccgccctcaccacccagggcccc
gccctcaccacccagggccccgcagccaaggatgatgccaaacccgcctgccagagagcc
ctcgccgttgacctcgcaccagatgccaagacactgaagtaa

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