KEGG   Scomber scombrus (Atlantic mackerel): 133994548
Entry
133994548         CDS       T10651                                 
Name
(RefSeq) lissencephaly-1 homolog B
  KO
K16794  platelet-activating factor acetylhydrolase IB subunit alpha
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco00565  Ether lipid metabolism
ssco01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09100 Metabolism
  09103 Lipid metabolism
   00565 Ether lipid metabolism
    133994548
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ssco03036]
    133994548
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssco04147]
    133994548
Chromosome and associated proteins [BR:ssco03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    133994548
Exosome [BR:ssco04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   133994548
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st Beta-prop_EML_2 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st ANAPC4_WD40 NBCH_WD40 Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_EML Beta-prop_Nup120_160 WDR90_beta-prop_4th LisH LisH_PAC1 WD40_RFWD3 Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_DCAF12 eIF2A Beta-prop_WDR35_TULP_N Nucleoporin_N Beta-prop_NUP159_NUP214 Pox_A_type_inc Beta-prop_WDR11_2nd ARMC9_LisH LisH_WDR26 DUF2570 SutA-RBD LisH_2
Other DBs
NCBI-GeneID: 133994548
NCBI-ProteinID: XP_062289834
LinkDB
Position
14:25654405..25670276
AA seq 410 aa
MVLSQRQRDELNRAIADYLRSNGYEEAYSTFKKEAEIDMNEEVDKKYAGLLEKKWTSVIR
LQKKVMELESKLNEAKEEMTHGGPVGQKRDPKEWIPRPPERYALSGHRAPVTRVIFHPVF
SVMVTASEDATIKVWDYEAGDFERTLKGHTDSVQDISFDQTGKLLASCSADMSIKLWDFQ
GFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEVATGYCVKTFAGHREWVRMV
RPNQDGSLIASCSNDQTVRVWVVSSKECKAELREHEHVVECIAWAPDSAHPTILEATGSE
SKKSGKPGPFLLSGSRDKTIKMWDVSIGICLMTLVGHDNWVRGILVHPGGRFIVSCADDK
TLRIWDYKNKRCMKTLCAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggtgctgtctcagagacaaagagatgaactaaaccgggctatagctgactatctccgt
tccaatggatacgaggaggcctattccaccttcaagaaagaggcagagatagatatgaat
gaagaggtagataaaaagtatgctgggcttttggaaaagaaatggacctcagtcatcaga
ttacagaagaaggtgatggagttggagtcaaagttgaatgaagcgaaggaggagatgaca
catggaggacctgtgggtcagaagagagaccccaaagaatggatcccccggcccccagag
agatatgccctgagcgggcaccgtgctccagtcacacgcgtcatattccaccccgtcttc
tctgtcatggtcacagcctccgaggatgctaccattaaggtgtgggactatgaggcaggg
gactttgaacgaaccctaaagggccacacagactctgtgcaggacatctcctttgaccag
acggggaagcttctggcttcatgttcagctgacatgagcatcaaactttgggactttcag
gggtttgagtgcatccgaacaatgcatggccacgatcacaatgtgtcatctgtagccatc
atgccaaatggtgaccacatagtgtctgcctccagagacaagaccatcaagatgtgggag
gtggccactgggtactgtgtgaaaacctttgcaggccacagggagtgggtaaggatggtg
cgtcccaaccaggacggctcgttgatcgctagttgctccaatgaccagacagtgcgtgtc
tgggtggtctcttcaaaggagtgcaaagctgagttgcgggagcatgaacatgtggtagaa
tgtatcgcctgggcccctgacagtgcccaccccaccatcctggaggccacaggctcagag
agcaagaagagtggaaagcctggccccttccttctgtctggatccagagataaaacaatt
aagatgtgggacgtcagcattggcatctgccttatgactctggtgggacacgacaactgg
gtgcgtggtatattggtgcatcctggaggaagattcatagtgagctgtgctgatgataaa
actcttaggatctgggactacaagaacaagcgctgcatgaagaccctgtgtgcccatgaa
cactttgttacctctcttgatttccacaagactgctccctatgtggtgacaggcagtgtc
gatcagacagtcaaagtctgggagtgccgctga

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