Scomber scombrus (Atlantic mackerel): 133994568
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Entry
133994568 CDS
T10651
Symbol
rnft1
Name
(RefSeq) E3 ubiquitin-protein ligase RNFT1 isoform X1
KO
K22379
E3 ubiquitin-protein ligase RNFT1 [EC:
2.3.2.27
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
133994568 (rnft1)
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133994568 (rnft1)
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133994568 (rnft1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-rbx1
zf-RING_5
zf-ANAPC11
zf-RING_6
zf-C3HC4_4
RING_XB3-XBAT31
Prok-RING_4
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
133994568
NCBI-ProteinID:
XP_062289865
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All DBs
Position
14:5997418..6001404
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AA seq
429 aa
AA seq
DB search
MKLRVQNDRSDCRRALKLRESPTVMQPNSSERGAHAGNGLSLTLQPELLTRTPAPGTVAA
AAAASPESNEVRVPMNSGSGESSGGTSSRRSRVNSHGHSHSHSHGHNRAQHHSNSEPELD
PPDSDMDSGEPSTSMSELRCLFRWLQKSLPFLIILCAKLIIQHALGLAVGVGLFTTFLYV
NKNIQTQVFLQDRHSKLQCAWLLFFLISSTLLLYYTFLTETLYHCLVFLSPTIEPLGFWE
VLWAVGITNFVIKFLFMGIKCLILLLPSSLVTYRAQGRLLMQTEELGQVHQSIAPVSLWF
RYLVTYQEADGTPGLTLGVLLALLYLILKLLALYGQWTSLLKTVRIFLNGEHTGTAATRS
QCSEAGDVCPICQGEYREPRALLCQHIFCDECIALWFNREKSCPLCRTVITEKVYKWRDG
ATSPHLQIY
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaaactccgggtgcagaatgacaggagtgattgcagaagagcactgaaactgagggag
tctcctactgtaatgcagccgaattcaagtgagcggggtgctcatgcaggaaatggttta
tccctgactctgcaaccggagcttctcaccaggacaccggcccctggtactgttgctgct
gcagctgctgccagccctgagagcaatgaggtgcgggtacccatgaacagtgggtctggg
gagtccagtggaggtacgtcatccaggaggtccagagtcaactcccacggccactcccat
tcacattcacatggacacaatcgagcgcagcaccactccaattcagagcctgagcttgac
ccgcctgactctgatatggactcaggagaacccagtacctccatgtctgagctccgctgt
ctctttcgctggctgcaaaagagtcttcctttcctcatcatactgtgtgctaaactgatc
atccaacatgctcttggactagcagttggggtcggcctcttcacaacttttttatatgtg
aataaaaacattcaaactcaagtctttcttcaggatcgacactcaaagctgcagtgtgcg
tggctgctgttcttcctgatctcttccaccctcctgctttactacacctttctcactgag
acactttaccactgcctcgtcttcctcagcccgactattgagccgctgggattctgggag
gttttatgggcagtcggcatcaccaacttcgtaataaagttcctatttatggggataaag
tgccttattctgctgctgccctcttcactggtgacctacagagctcaggggcggttgctg
atgcagactgaggagcttggtcaggtccaccagagcattgctcctgtttcactgtggttc
cgctacctggtcacctaccaggaggctgacggcacccctggactcacactgggggttttg
ctggctttgctctacctcatactgaagcttttagcattgtacggacagtggacgtcttta
ctgaaaactgtgaggatatttctaaatggcgagcatacaggcacagcagccactaggagt
cagtgcagcgaggctggagacgtctgccccatctgtcagggagagtacagggagcctcgg
gctctgctctgtcagcacatattctgtgacgaatgcatcgctctgtggtttaaccgggag
aagagttgccctctctgccgcactgtgatcacagagaaggtctacaaatggagggatgga
gccacatctccacacctgcagatttattga
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