Scomber scombrus (Atlantic mackerel): 133994575
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Entry
133994575 CDS
T10651
Symbol
birc2
Name
(RefSeq) baculoviral IAP repeat-containing protein 2
KO
K16060
baculoviral IAP repeat-containing protein 2/3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04120
Ubiquitin mediated proteolysis
ssco04210
Apoptosis
ssco04217
Necroptosis
ssco04510
Focal adhesion
ssco04621
NOD-like receptor signaling pathway
ssco05132
Salmonella infection
ssco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133994575 (birc2)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
133994575 (birc2)
04217 Necroptosis
133994575 (birc2)
09144 Cellular community - eukaryotes
04510 Focal adhesion
133994575 (birc2)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
133994575 (birc2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133994575 (birc2)
09171 Infectious disease: bacterial
05132 Salmonella infection
133994575 (birc2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssco01002
]
133994575 (birc2)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
133994575 (birc2)
Peptidases and inhibitors [BR:
ssco01002
]
Peptidase inhibitors
Family I32: IAP family
133994575 (birc2)
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133994575 (birc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
UBA_BIRC2-3
CARD
zf-C3HC4_3
Prok-RING_4
zf-RING_2
zf-RING_5
zf-C3HC4_2
DUF2039
CFAP47
Motif
Other DBs
NCBI-GeneID:
133994575
NCBI-ProteinID:
XP_062289878
LinkDB
All DBs
Position
14:13179620..13187001
Genome browser
AA seq
642 aa
AA seq
DB search
METLIHLKNNQFLMGLCRNGPPPDLQYDNSSELYRISTFARFPASGVTERSLARAGWFYT
GVGDRVQCFRCNVTAEGWQAGDCPTEKHRQLSPSCSFIQSLPSTANLLSSSHSAFSPLRI
APAIPLSGPGPAAANPTVSQGEEPGGYLNMGFSAPPPSSPLTSRGVEDMSHQRPTCHNPS
MRREQDRLDSFHNWTLSIITPAELAKAGFYYLGQGDRVACFSCGGQLSNWEPGDRAVSEH
QRHYPNCRFVRGDRADNVSLAGASGAAPGAVTSQMSAGAPALSNVSNPAMQQSDERLLTF
VNWPSRIPVRPDQLAKAGFYYVGRNDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEYL
LQEKGQDFVHQIQARFPRLFEQLLTNGDSSSREFVDPPVVHLGPGEERSEDAVMMNTPVI
KSALEMGFERSLVKQTVQSKILTSGENYRTVQELVSDLLSAEDQKREEEREMLAEAMASD
GFTFVKRHQAALIQRLKSVEPVLEHLREQNVLSAEDYSSLQAQTSAQQQTAKLIELVLTK
GNAAAEVFRNWIQKNDVHLLRDLMAQSNEAASPSQDLSDLPMEEQLRRLQEERTCKVCMD
KEVNIVFIPCGHLVVCKECAPSLRKCPICRGLVKGTVRTFLS
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggaaactcttattcatcttaaaaacaaccaatttttgatggggctgtgccgcaacggg
cctccacctgaccttcagtatgacaactcctcagagctctaccgcatctccacctttgct
cgcttcccagcttcaggagtcacagagcgaagtctggcaagggcagggtggttctacact
ggtgtgggcgaccgtgtgcagtgtttcaggtgtaacgtgaccgcagagggctggcaggct
ggagactgtccgacagagaagcacagacagctttctccctcctgctccttcatccagagc
ctcccatccacagccaatctgctctcctcctcacactctgccttctcccctctccgcatc
gccccagctataccactttctggtccaggcccggctgctgctaacccgacagtaagtcaa
ggtgaagaaccaggcggctatctaaacatgggcttctctgctccaccgccctccagtcca
cttacctcccgaggagtggaagacatgtcccaccagagaccgacatgccacaaccccagc
atgcgcagagagcaggaccgccttgactccttccacaactggacgctctccatcatcacc
cccgcggagctcgccaaggcgggcttctactacctgggccagggtgaccgagtggcttgc
ttcagctgtggaggacagttgagtaactgggagccaggcgacagagctgtgtctgaacac
cagaggcattatccgaactgtcgttttgtccgcggggacagagctgacaacgtgtcgctg
gctggagcttcaggagctgcgcctggagcagtaacctcccaaatgtctgcaggagctcca
gccctcagtaatgtgtccaaccccgccatgcagcagagtgatgagaggctgctcaccttc
gtcaactggccgtctcgtatccctgtcaggcctgaccagctggctaaggctggcttctac
tatgttggtcgcaacgatgatgtcaaatgcttctgctgcgatggaggcctgcgatgctgg
gagtctggagacgatccctgggtggaacacgctaaatggtttcctcggtgtgaatatttg
ctccaggagaagggacaagactttgttcaccagattcaggctcgttttcctcggctgttt
gagcagctgttaacaaacggagacagcagctccagagagtttgtggatccacctgtggtt
cacctcggccccggtgaggagcgttccgaggatgccgtcatgatgaacactcctgtgatt
aaatcggctttagagatgggcttcgagcgcagtttagtcaagcagacggtccagagcaag
atcctgaccagcggtgagaactacaggacagtccaagagctggtttcagacctgctgagt
gcggaggaccagaaaagggaagaggagcgagagatgctggctgaggcgatggcatcagat
ggtttcacctttgtgaagagacaccaggcagcattaatccagcgcctgaagagtgttgaa
ccagtgttggagcatttaagagaacaaaatgttttatctgctgaggactacagcagcctt
caggctcagacatcagcccagcagcagaccgccaagcttatagagctcgtcctcaccaag
ggcaacgctgcagccgaggtcttccgcaactggatccaaaaaaatgatgtccacttgctc
cgagatctcatggctcagtcgaatgaagctgcgtcaccaagccaggatctttcagatctc
cccatggaggagcagctgcggcgcttgcaggaggagcgcacctgtaaagtgtgtatggat
aaagaggttaacatcgtcttcatcccatgtggacacctggtggtgtgcaaggagtgcgcg
ccatcactacgaaagtgcccaatctgcagaggcctggttaaaggcactgtccgaacgttc
ctctcatga
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