Scomber scombrus (Atlantic mackerel): 133994586
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Entry
133994586 CDS
T10651
Name
(RefSeq) claudin-4-like isoform X1
KO
K06087
claudin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03272
Virion - Hepatitis viruses
ssco04382
Cornified envelope formation
ssco04514
Cell adhesion molecule (CAM) interaction
ssco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
133994586
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
133994586
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
133994586
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133994586
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssco03037
]
133994586
04147 Exosome [BR:
ssco04147
]
133994586
Cilium and associated proteins [BR:
ssco03037
]
Other cilia and associated proteins
Stereociliary proteins
133994586
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
133994586
Exosomal proteins of colorectal cancer cells
133994586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Motif
Other DBs
NCBI-GeneID:
133994586
NCBI-ProteinID:
XP_062289896
LinkDB
All DBs
Position
14:complement(25826232..25832383)
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AA seq
380 aa
AA seq
DB search
MVSLALELTGISLSVLGWLLSVVSCALPMWRVSAFIGANIVTAQVYWEGLWMSCVFQSTG
QMQCKVYDSMLALPQDLQSARALTVISIILGLLALLISMVGAKCTNCIDAEGPKARVMAA
SGGAFITAALTQLVPVSWSAHTIIIEFYSPIVPEGQKMEIGAAMSMGMEIVGIALGAIGF
IIAIVTCAMPMWKVTAFIGANIITAQTIWEGLWMNCVTQSTGQMQCKVYDSMLALPRELQ
ASRAMMIIAIILGVLGVLISIVGAKCTNCIEDEPSKAKVMIIAGIFFILGGLLVLIPVSW
TASVIIRDFYNPLLTNAQRRELGASLYIGWGAAALLLIGGAMLCSSCPPKEKKYKPPRMA
YSAPRSTSAGGGGYDRKDYV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctcttgcacttgaactgaccggcatcagtctttcagtgctcggctggctgctg
agtgtggtcagctgcgccttgccgatgtggagggtctccgccttcattggcgccaacatc
gtcacagctcaggtgtactgggaaggcctgtggatgagctgcgtcttccagagcacgggg
cagatgcagtgtaaggtctacgactccatgctggccttacctcaggacctgcagtctgcc
agggcgctcaccgtcatctccatcatcctgggattgctggctctcctcatctccatggtg
ggagcgaagtgcaccaactgcatcgatgcagagggacctaaagccagggtgatggctgcc
tccggtggggcattcatcacagcagctctgacccagctggtgcccgtctcttggtccgca
cacaccattataattgagttctacagtcccatcgtcccagaaggccagaagatggagatc
ggggcagccatgtcgatgggtatggagattgtgggcattgccctcggagccattggattt
ataattgcaatcgttacatgtgccatgccgatgtggaaggtgacggccttcatcggagcc
aacatcatcactgctcagaccatctgggagggtttatggatgaactgtgtcacccagagc
acaggccagatgcagtgcaaggtctatgactctatgctggccttgcctcgggagctgcag
gcctccagagcgatgatgatcatcgccatcatccttggggtgctgggggttttgatctcc
attgtcggcgccaagtgcaccaactgcatcgaagacgagccatccaaagccaaagtgatg
atcatcgctggaatcttcttcatccttggtggccttctggtcctcatccctgtctcctgg
accgccagcgtcatcatacgtgatttctacaacccgctcctgaccaacgcacagaggagg
gagctgggggcctcgctctacatcggctggggggccgcagccttgctactgattggtggg
gcgatgctatgcagcagctgcccgccaaaagagaagaagtacaagccgccccggatggcc
tactcagctccgcgcagcaccagtgcgggtggaggagggtatgacaggaaagactatgta
tga
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