Scomber scombrus (Atlantic mackerel): 133994806
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Entry
133994806 CDS
T10651
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133994806
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
U-box type E3
133994806
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133994806
NCBI-ProteinID:
XP_062289961
LinkDB
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Position
2:complement(26643647..26660826)
Genome browser
AA seq
1786 aa
AA seq
DB search
MSCVHYKFSSKLDYNTVTFDGLHITLSELKRQIMGRERLKATDCDLQITNAQTREEYTDD
EAHIPKHSSVIVRRTPLGGVKPAGRTFIVDRSDTAVVGSSRPTDSSPSMSFAQLTKTANL
VDANASEEDKIKAMMTQSNHEYDPIHYSKKAIGPPPAHYTCYRCGKAGHYIRQCPMLIIQ
DKSVEAPKSVRISKGIPQSFMVKAEPGTKGAMLTSTGEYAIPAIDAEAYAQGKKERPPFV
PHDQSSSEDDSDPIPDELLCPICNDLMTDAVVIPCCGNSYCDDCIRTALLDSEEHVCFTC
KQSDVSPDNLIANKFLRQAVNNFKNETGYTKHVRKQVQHTAPPPPRPLLVRPLHSRQQDP
LMANISHPPPTSVPTAAPQVQAAPPAPAAAAATTADPTPPHAAAAAVEEHAASPVPAPVI
DHHSPMHSTSQGEPPPPGETDPEPIVKPEPSGPPDHGPSESGSQGYHLTVIGHPPPLRPP
HPSGHQARPHHSHRGGGGGGGGGGGGGRHWDRSYRSRGEHPSTHLQNAPPPIPAPPVYPT
PSMYPPPPQSYPPPYASGPGLIPPPLSYQPQPVYAPGPPGLNPPWVAPGAQPPLIPLPPS
LGQPPLSKEDFYRQRHHRQDKVTSKLDEFTKDFHKELMKYRNAPKRRRPSYSRSRSYSRS
PFSRSPYTRSRSRSRSRSRSRSRSYSYSPSRSRSRSHGRSYPRSPYSRRNGRSYGRSRSR
SRSRSRSYGYRRSGSPRSPPPFRGGGWEGPEAAGPYRSRSRSRSPGGFRSRSPGGRKPPP
REIAPYELKGPNPAGHERWDRDSYRQWEKEYRDWYNKYYKDYDGQHPPLHHRGRGSRDRE
RDRMSPPNRDYSPQGRGRRGREERGGPPHHPPSSSSSGAKSSTKVLKTKKVKKKKSGDEP
EPSHQSVDRGDATPVRDEPMDEIPSLTKTPPISSKPPVGTATTKAPASKSTAAPVKPPTK
STSKTQSDKTKKDKGQKVKAKVKTEAVKVKSDKVKKKTGEAVVTKKKESSSSSSSVAKPL
KITKAKPEDAPNSTTPKKEKSKSSTARPPRPKTPPLSSQNLPLPHPLHDGPRSSHDMRGR
RDLPQGGGLLPIPHHPLLHLPPSPGDSRRRMGEESRSLLGPPPGKVRRMDGLGGGGDILS
HSHISHQPPLQRLTHPSDRPGLLPIPGSREMGRGDPDRGPIRPLMDLQVKPLSQTQRRIK
LNRELGRKGSTETAPSERSSSGPEKTSSTSDRSSAANVPEGDRASSTAESAGRKERSTSG
ERGVSRERPGSAGERLSGSDRVSDRSSGLDRDRERTSGLDRERDRDRGAGSERERDRERV
SGSSSQKASVTVEREAEGERLGRTERKNSSSRSGGARSVSLDKMTIAEKCAVTKKTDPEE
KPSVSSKKGEGSERAAKSDRSVSKDRTERSVPSGEKPAAPHREAVKDAEVSSVKSKPRIS
RKALTSHSVSSTSSRSTQEMKQDSEKEPKSASSKPTEQPLPSPVNSRGRSPSVSPAPSPA
REEPLIQAPPRSKWEQEDDEEGQENGLSAPKEPSPVPQRSRGREGQTEAPKHVRSESRDA
PREERRGVVREEKKGRVPREEGKGGRAAQANSDKPTKTKIARDEGRGVREEGRAGAREEG
RGGREEGRGAPAKEERAAESRGGAGREESRGPEPRRQRLCSDLGRETDEAAFVPDYSEGE
GSDTERGRSGSGSPSPSIGQASNSNSPSNHSDSANTSTTTADKKKKKHKKHKKHKKHKKH
NSQEKEGAEHKEHKHKHKKKKHKKNKDKDGEEKEDKAEKSEEETPC
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgtgttcactataagttttcttccaaactggactacaacacagtcactttcgat
gggctccatatcaccctcagtgagcttaaaaggcagattatgggccgggagcgcctcaag
gccacagactgcgacctgcagatcaccaatgcgcagactcgagaagaatacacagatgat
gaagcccacatcccgaaacactcttccgtgatcgtccgccgcactccgcttggtggagta
aaacccgctggcaggacgttcattgtagatcgttctgacacagctgtggtgggatcgtct
agacccactgattcttctccttctatgtcattcgcccaactgaccaagactgctaacctt
gttgacgcaaatgcatcagaggaagacaagattaaagccatgatgactcagtcgaaccac
gaatatgacccgatacattactccaaaaaggcgatcggacctccacctgctcactacacc
tgctatcgttgtggaaaagctggtcactatattcggcagtgtcccatgctgattatccag
gataagagtgtggaggctcccaagtcagtaaggattagtaaggggattcctcagagcttc
atggtgaaagcagagcccggcactaagggagccatgttaacgagcaccggagaatacgcc
atacctgctatagatgcggaggcgtacgcacaaggaaagaaggagcgtcctccgtttgtt
cctcatgatcaatcgtcctccgaggatgattcagacccaatcccagatgagctcctttgt
ccgatctgcaacgacctgatgactgacgctgtggtcataccctgctgtggaaacagttac
tgcgatgattgtatcaggaccgccttgctggactcagaggaacacgtctgctttacgtgc
aaacagtcggatgtttcgcctgataatctcatagccaacaagttcctccgacaggctgtg
aacaactttaagaacgagacgggatacaccaaacacgtgaggaagcaggtccaacacaca
gccccacctccgcctcgccccctgttggtcaggcctcttcactccagacagcaagacccg
ctgatggctaatatctctcacccccctcctacaagtgtacccactgcagctcctcaagta
caggcagcgccccccgcaccggctgctgctgctgctaccaccgctgatcctactcctcct
catgctgctgctgctgctgtcgaagaacacgcagcctcaccagttcctgcacccgtcatc
gaccaccattctcctatgcactcaaccagccagggtgaaccgcctccaccaggtgagacc
gacccagagcctattgtgaaaccagaaccatctggtccccctgatcatggaccctctgaa
agtggatcccagggctaccatttaactgtcattggccacccgccacctttaaggccacct
catccatcaggccaccaggcaagaccccaccactctcacagaggaggaggaggaggagga
ggcggtggtggcggtggcggcagacactgggacaggtcctacagaagtagaggagagcat
ccttccactcatctccagaatgctccacctcctattcctgctcctccagtctatccaaca
ccgtccatgtacccaccacctccacagtcctacccccctccgtacgcctctggccccggc
ctcatccctcctcctctcagttatcagccccagcctgtctatgcccctggaccaccggga
ctcaaccctccctgggtcgcccctggtgcgcagccccctctcatccctcttccaccctcc
ctcggtcagccccccctctcaaaagaagatttctaccggcagcggcaccaccgtcaggac
aaagttacatcaaaactggatgaatttactaaagacttccacaaagagcttatgaagtac
agaaatgcaccaaagaggcgaagaccgtcttattccaggtcccgctcatacagccgctct
ccgttcagccgctctccttacactcgctctagatccagatccagatctagatccagatca
agatcacggtcttactcttattcccccagtcgatcccgttcacgctctcacggccggtct
tatccccgttctccttattctcgacgcaacgggcgcagttacggacgctcacgatcgaga
tcccgctctcgttcaaggtcttacgggtatcggcgctccggctcaccgcggtctcctccc
cccttccggggaggaggctgggagggaccagaagcagcaggaccctacaggtctaggtca
cggtctcgctcaccgggtggcttccggagccgcagccccggtggacggaagccacctcct
agagagatagcgccatatgaactgaagggtcccaaccccgcaggccatgagcgctgggat
agagatagctaccgacagtgggagaaggagtacagagactggtacaacaagtactacaaa
gactacgacggccaacatccaccgctgcatcacagaggccgaggcagccgagaccgggag
agagacagaatgtccccgccaaatagagattactcccctcaggggcgagggaggagaggg
agagaagagagaggcgggccacctcaccatcctccatcatcttcctcatcaggagcaaag
tccagcactaaagtcctaaagacaaagaaagtcaagaagaagaagtccggggacgagcct
gagccgtcacaccagtcagtggacagaggggacgccacacccgtcagagacgaaccgatg
gacgagatcccctcgcttacgaaaacacctcctatctcctcaaagcctccagttggcacc
gcaactactaaggctccagcctctaaaagcactgctgcacccgttaaaccgccgaccaag
tccacgtcgaagactcagtctgacaagaccaagaaggacaaaggtcaaaaggtcaaagcc
aaagtaaaaacagaggctgtgaaggtcaagagtgacaaagtgaagaagaagacaggagaa
gcagtggtgaccaaaaagaaagagtcctcctcctcgtcctcctctgttgcaaaaccgtta
aagatcaccaaagccaaaccagaagatgcccccaactcaactacccctaaaaaggaaaag
agtaaaagctccacagcgagaccacctcgacctaaaacccctccactgtcctcccagaac
ctgcctctacctcatcccctccatgacggccctcgatccagccacgacatgcgagggagg
agagatcttcctcagggcggtggtctccttcccatcccccatcacccgctcctccacctc
cctccctccccaggagacagtcggaggaggatgggagaggagagccgttccttactgggg
cctccacccggaaaggtgaggaggatggatggactcgggggtggaggtgatatcctctcg
cactcacacatctcccatcagcctccactccagaggctcacacacccatcggaccggcct
ggccttcttcccataccagggagccgcgagatgggccggggagaccctgatcgaggaccc
atcagacctctcatggaccttcaggtgaagccgctcagtcagactcagaggaggataaag
ttgaacagagagctggggagaaaaggcagcacggagacggctccctcagaaagatcatcc
tcaggccctgagaaaacgagctctacctcagaccgatcgagtgccgccaacgtcccagaa
ggagaccgagctagcagcacagcggaaagcgctggaagaaaagagcgatcgacctctggc
gagagaggagtctccagagagagaccagggagcgctggagagagactgtcgggctcagac
agagtgtcggacagaagctcgggactggaccgagaccgggagagaacttcaggactcgac
agagaaagagaccgagacagaggtgcagggtctgaaagagagagggaccgagagagagtc
tcggggtcaagctcgcagaaggcgtcggttacagttgagagagaagctgaaggagagagg
ttgggcaggacggaaagaaagaactccagcagtagaagtggaggcgcgaggtccgtctct
ctggataaaatgaccatagcagaaaaatgcgccgtcaccaagaagacagaccctgaagag
aaaccaagcgtgtcctctaagaaaggagaggggtcagaaagagctgctaaatctgacagg
agtgtgtccaaggacagaacagagaggagcgtcccctcaggagagaaaccagctgctcct
cacagagaagcagtgaaagatgctgaggtgtcttctgtgaagagcaaacccaggatcagt
cgaaaggctttgacgagccacagtgtgagttccaccagcagtaggtcaactcaagagatg
aaacaagactcagaaaaagagcccaaaagcgcgtcctccaaacccacagagcagcctctg
ccgagccccgtgaacagccgtggccgcagccccagcgtcagcccggctcccagccctgcc
agagaggagccgctcattcaagcacctcctcgctccaaatgggagcaggaagacgatgaa
gaggggcaggaaaatgggcttagtgcacctaaagagccctcacctgtgccacagagaagc
cgaggcagagaggggcagaccgaagcacctaaacatgtccggagcgagagccgggatgct
ccaagggaggagaggagaggagtagtgagggaggagaagaaagggagagtgccaagggag
gagggtaaaggtggcagggcagcccaggcgaattctgacaaaccaaccaaaactaaaatc
gcgagggatgaggggagaggtgtcagagaagaagggagagctggagcaagagaggaagga
agagggggacgagaggagggaagaggagcgcccgcaaaggaggagagagcggcagaaagc
agaggaggagcagggcgagaggagagccgtggcccggagcccaggaggcagcgtctgtgc
tccgacctgggtcgcgagaccgacgaggccgccttcgtcccagactacagcgaaggagaa
ggctcagacacggagcgagggaggagcgggagcggcagccccagcccgtccataggccaa
gcctccaacagcaactcccctagcaaccacagcgactcggcaaacacctccaccaccacg
gcggacaagaagaagaagaaacacaagaaacacaagaaacacaaaaagcacaagaagcac
aacagccaggagaaagagggagccgaacacaaggagcacaagcacaaacacaagaagaag
aaacacaaaaagaacaaggataaagacggagaagaaaaggaagacaaggcggagaaatca
gaggaggagacaccttgctaa
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integrated database retrieval system
