Scomber scombrus (Atlantic mackerel): 133994873
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Entry
133994873 CDS
T10651
Symbol
hnrpkl
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein K, like isoform X1
KO
K12886
heterogeneous nuclear ribonucleoprotein K
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133994873 (hnrpkl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssco03041
]
133994873 (hnrpkl)
Spliceosome [BR:
ssco03041
]
Common components
Common spliceosomal components
hnRNP proteins
133994873 (hnrpkl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
ROKNT
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
KH_Vigilin
MOEP19
DJ-1_PfpI
Glyco_tran_WecG
Motif
Other DBs
NCBI-GeneID:
133994873
NCBI-ProteinID:
XP_062290063
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Position
15:complement(10806918..10821513)
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AA seq
431 aa
AA seq
DB search
MEVNIEQQDEDITFSNTDTNGKRPAEDMDEEQAFKRSRNADEMVELRVLLQSKNAGAVIG
KGGKNIKALRTDYNASVSVPDSSGPERILSVNASIDTIGEILLKIIPTLEEYQHYSGIDF
DCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLVGGKPERVI
ECIKVILELVSEAPIKGRAQPYDPNFYDETYDYGGFTMLFEERGRRPIGGFPIRVRGGFE
RMPPVRGNRPMPPSRRDYDDMSPRRGPPPPLSRGGRGGSRARNLPLPLPPPPRGGGDRFS
HGSYHGSMDDRPSDRRGRGGDRYDSMSGGGYDNNSSWEHFQSGGRGSYSDIGGPIITTQV
TIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQ
NSVKQYSGRFF
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaatattgaacagcaggacgaagacatcacattcagcaatactgacacgaat
ggtaaacggccagctgaggacatggacgaggaacaggcattcaaacggtctcgcaacgca
gacgagatggtggagctgcgtgttctgcttcagagcaaaaatgctggcgctgtcattgga
aagggtggcaagaacataaaagccctacgcacagattacaatgccagtgtatcagtccca
gacagcagtggcccagagcggatcctgagtgtgaatgccagcattgacactattggagag
attctgctgaaaatcatacctactctagaggagtaccagcattacagtgggattgacttt
gactgtgagcttcgcctactgatccatcagagcttagcagggggcatcatcggggtgaaa
ggtgccaagataaaggagctgagagagaacacccagaccaccatcaagttgtttcaggag
tgctgtccgcactccactgacagagttgtcttggtgggaggaaagccagaacgtgtcatt
gaatgtataaaagttatcctggagctggtgtcagaggcaccaatcaaaggtcgtgcccag
ccttatgaccctaatttctatgatgaaacatacgactatggtggtttcaccatgttgttt
gaggaaagaggcagacgacccatcggtggcttccccattcgtgtgcgtgggggctttgag
cgtatgccacctgttcgaggcaacagacccatgcctccctccagaagggactatgacgac
atgagcccccgtcggggtcctccgccaccgctgagcagaggtggacgagggggcagcaga
gctcgtaacctgcctcttccgctaccaccaccaccaagaggaggaggagacagattctca
catggcagctatcatggcagcatggacgacagaccaagtgacagaagaggccgaggagga
gaccgctatgacagcatgagtggaggtggatatgacaacaattcttcctgggagcacttt
cagtccggtggcagaggctcatacagtgatatcggaggcccgatcatcacaacgcaagtc
accatcccaaaagatctggctggctccatcatcggtaagggcggccaaaggatcaagcaa
atccgccacgagtctggggcatccatcaagattgatgaaccactagagggctctgaggac
cgtatcattaccatcacaggaacacaggaccagatccagaatgcccagtacctgctgcag
aacagcgtgaagcagtactctggtcgattcttctag
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