Scomber scombrus (Atlantic mackerel): 133994881
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Entry
133994881 CDS
T10651
Symbol
ppwd1
Name
(RefSeq) peptidylprolyl isomerase domain and WD repeat-containing protein 1
KO
K12736
peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:
5.2.1.8
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssco03041
]
133994881 (ppwd1)
03110 Chaperones and folding catalysts [BR:
ssco03110
]
133994881 (ppwd1)
Enzymes [BR:
ssco01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
133994881 (ppwd1)
Spliceosome [BR:
ssco03041
]
Complex C
Other components
PPlases
133994881 (ppwd1)
Chaperones and folding catalysts [BR:
ssco03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
133994881 (ppwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
WDR55
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
Beta-prop_EML_2
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_2nd
WD40_Gbeta
PEP5_VPS11_N
Beta-prop_WDR75_1st
Beta-prop_Vps41
VPS11_N
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
133994881
NCBI-ProteinID:
XP_062290080
LinkDB
All DBs
Position
15:complement(23417931..23423225)
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AA seq
627 aa
AA seq
DB search
MAAAENNVELKRKAEDEQPADGSQEEEEEWVGPMPSEATTTKKRKVLEFERVYLDNLPSA
AMYERSYMHRDVITQLVCSKTDFIITASQDGHVKFWKKKEDQGIEFVKHFRCHLSVIESI
AVSAEGALLCSVGDDQAMKVFDVVNFDMINMLKLGFHPGQSEWIYNPGDAISTVACSEKS
TGKIFVYDGRGSNEPFHVFDKMHSSPLSQIRLNPKFRVIVSADKAGMLEYWTGLPSEFKF
PRQVQWEYKTDTDLYEFAKHKTYPTSLTFSSDGKKMATIATDRKVRIFRFLTGKLMRVFD
ESLTMFTELQQMRQQLPDMEFGRRMAVERELEKVDGIRLTNIIFDETGHFVLYGTMLGIK
VINVETNRCVRILGKLENIRVVQLGLFQGIAKAMQVAPTVEMKASDNPALQNQEADPTIF
CTAFKKNRFYMFSKREPEDTKNADSDRDIFNEKPSKEEVMAATQAEGPKRVSDSAIIHTT
MGDIHIKLFPVECPKTVENFCVHSRNGYYNSHIFHRVIKGFMIQTGDPTGTGMGGESIWG
GEFEDEFHATLRHDRPYTLSMANGGPGTNGSQFFMTVVPTPWLDNKHTVFGRCAKGMEVV
QRISNVKVNPKTDKPYEDISIINITIK
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggctgaaaacaatgtggagctgaagcgaaaagctgaagatgagcagcctgca
gatggaagccaagaagaagaggaagaatgggtcggacctatgccaagcgaggctacaacg
accaagaaaaggaaagttttggagtttgaacgtgtttacctggacaacctcccatcagct
gctatgtatgaacggagctacatgcacagagatgttattacacagctagtttgttccaag
acggacttcattatcacggccagtcaggatggacatgtcaagttttggaagaagaaggag
gatcagggaatagagtttgtcaaacactttcgatgtcacctgagtgtgatagaaagcatt
gcagtgagcgctgaaggagcccttctctgttctgttggggacgatcaggccatgaaagta
tttgatgttgtcaactttgacatgatcaacatgctgaagttgggctttcatccaggtcag
agcgagtggatctacaaccccggcgatgccatctccactgtggcctgctcagaaaaatct
acaggcaagatcttcgtttatgacgggcgagggagcaacgagcccttccacgtcttcgac
aagatgcactcctcgccgctgtcccaaatccgccttaatcccaaattcagagtcatcgtc
tcggccgacaaagcgggaatgcttgaatactggaccggcctcccgagtgaattcaagttc
cccagacaggtgcaatgggaatataaaacagacacagacttgtatgaatttgcgaaacac
aaaacttatcccaccagtctgacgttttcatctgacgggaagaaaatggcgaccatcgcc
accgacaggaaagtcaggatcttccgcttcttaacaggaaaactgatgagggtgtttgat
gaatcattaacaatgttcacagagctgcagcagatgaggcagcagctgcccgacatggag
tttgggaggcggatggccgtggagagagaactggagaaggtggacggcatccgtttgact
aacatcatctttgacgagaccggacattttgtcctgtatgggaccatgctgggaatcaaa
gtcatcaatgtggagaccaacagatgtgtgcggatcctcgggaagctggagaacatccgt
gtggtgcagctgggtctcttccaggggatcgcgaaggccatgcaggtggcccccaccgta
gagatgaaagcgtctgacaaccccgccttacagaaccaggaggcggaccccaccatattc
tgcaccgccttcaagaagaaccgcttctacatgttctccaagcgggaaccggaggatacg
aagaacgcagactcggacagagatatctttaacgagaagccttcgaaggaggaggtgatg
gccgccacgcaggctgagggccccaagagagtgtctgacagcgccatcatccacaccact
atgggagacatccacatcaagctcttccctgtagaatgcccaaaaacggtggagaacttc
tgcgttcacagcaggaacggatactacaacagccacatattccacagagtcattaagggt
tttatgattcagaccggagaccctaccggtacgggcatgggaggcgagagcatctgggga
ggagagtttgaggacgagtttcacgccacgctgagacacgatcgtccgtacacgctcagt
atggcgaacggcggccccggcaccaacggctcgcagttctttatgactgttgttcccact
ccttggctcgacaacaagcacactgtatttggaaggtgtgctaaaggcatggaggtggtc
cagaggatctccaacgtcaaagtcaaccccaagaccgacaaaccgtacgaagacatcagc
atcatcaacatcaccataaagtga
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