Scomber scombrus (Atlantic mackerel): 133994926
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Entry
133994926 CDS
T10651
Symbol
rapgef1b
Name
(RefSeq) rap guanine nucleotide exchange factor 1b isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04510
Focal adhesion
ssco04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133994926 (rapgef1b)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
133994926 (rapgef1b)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
133994926
NCBI-ProteinID:
XP_062290151
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Position
15:10061343..10110927
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AA seq
1082 aa
AA seq
DB search
MSGKIESKQDSQRSHLSSFTMKLMDKFHSPKIKRTPSKKGKQLQPEPAAKSTEKPANKKV
SRLEEHEKEVVSALRYFKTIVDKMVVEKKVLEMLPGSASKVLEAILPLVQVEARIQHSSA
LSSCHNRVYQSLANLIRWADQVMLDGIDLEDKENVASVTSVIKAVLDGVKELVKLTIEKQ
EQPSPTTPNKPALPATTSESSAPSEMPLIEREPEVSNKTAPAAVPAEAASDIPDEDVAPP
KPPLPEAKMAELSPPPALPPKKRQSAPSPTRVAVVAPMSRGSSLPCSVHRQQQDYEQEFL
QRRFSGGSQSYGGDSPRLSPCSSMGKLSKSDEQLSSMEQDSGQCSRNTSCETLDNTENYD
PDYDFLHQDLSVGENLPPIPVGGCLSPLPESHSESSSPVPGQHPSHPRFSAPPPQQPPEY
WTPQPNQTNPLQPSRVSAPPALPQKKRRSTQTTPVPEGSRVLYERYPSQYDNLSEEELHP
TPPFPLFTPISPMPQTNGGVFVAQYMASENADVPASPPPLPEKKSRHILQYMQFVEDYSE
PQPSVFYQMPQSESIYEQRNKRFQEVYGFNDSFSSTDSVHEPLLPPALPPKQRQLSESAN
DEGGEGEYVNLYSSSQANGELPLSLRETIAADDVLQDPTPQMPSTNSKEALDKERRQKST
ESAGSDEEDVDELSLIDHKEIMSRITLKQENDDGPDVRAGSGDILLVHATETDRKDLVLY
CEAFLTTYRTFITPEDLIKKLHYRYTRFCHSPDTFKKRVSKNTFFVLVRVVDELCLVELT
EDILKQLMDLVFTLVCNGELSLARVLRKNILDKVEQKKLLRYTNSLKPLAARGVSARPGT
LHDFRSHEIADQLTLLDAELFYKIEIPEVLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRS
LIIQQEKAQDREKLLLKFIKIMKHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLE
EYCTLIDSSSSFRAYRAALAEVEPPCIPYLGLILQDLTFVHLGNPDLIDGKVNFSKRWQQ
FNILDSMRRFQQVHYELKRNEDIVSFFNDFSDHLAEEALWELSLKIKPRNIARRKTDREE
KT
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaaaaatagagagcaagcaagactcgcagcggtcccatctgtcctctttcacc
atgaaactgatggacaagttccattcgcccaagatcaagaggactccatccaagaagggc
aagcaactgcagcccgagccagcagccaagagtaccgagaaacctgctaacaagaaggtg
agtcggctggaggaacatgagaaggaggtggtcagtgccctgcgctacttcaagacaatc
gtggacaaaatggtcgtggagaagaaggtgctggagatgcttccaggctcggccagcaag
gtgctagaggccatcctgcctctggttcaggtagaggctcggatacagcacagttctgcg
ctgtcttcctgccataaccgcgtgtaccagagtctggccaacctcatccgttgggcagac
caggtgatgctggatggcatcgacttggaagacaaggaaaatgtggcgtccgttacgagc
gtcatcaaagcagtgctggatggagtaaaggaactggtgaagctgaccatcgagaaacag
gaacagccgtcacccaccaccccgaacaaaccagcactacctgcgaccacatcggagagc
agcgcgccgtcagagatgcctttgatagagcgggagccggaggtttcaaataagacagct
ccagcagctgttcccgccgaggccgcctccgacataccagatgaggatgtagccccaccc
aaacccccccttcctgaagccaagatggcagagctcagtcctccaccagcccttccccct
aagaagcgccaatcagccccttcgcctacacgggtggcagtggttgcccctatgagccgt
ggctccagcctgccttgcagtgtccacagacagcagcaggactacgaacaggagttccta
cagaggcgtttctctggggggagccagtcatatgggggcgactctccgcgcctgtctcct
tgcagcagcatggggaaactgagcaagtcagacgaacagctttcctccatggagcaggac
agcggtcagtgttctcgtaacaccagctgcgagacgctcgacaacacagagaactacgac
cccgattatgacttcctccaccaggacttgtcagttggggaaaacctgcccccaatacct
gtaggagggtgtctgagccccctgcctgagtctcacagcgagtcctcttccccagtcccc
ggacagcatccctcacacccccgcttcagcgctcctccaccccagcagccgccagagtac
tggaccccgcagcccaatcaaactaatcctttacagccctcccgtgtcagcgcaccacct
gcccttccccaaaagaagcgacgcagcacccagacaacacccgtccccgaagggtcaagg
gtgctgtacgagcgttacccctctcagtacgacaacctgtcagaagaggagctgcacccg
acaccgccgttcccccttttcacgcccatctcacccatgccccagacaaacgggggcgtg
ttcgtcgcccagtacatggccagcgaaaatgcagacgtccccgccagcccaccgccactg
ccagagaagaaaagcagacacatcctccagtacatgcagtttgtggaggactactccgag
ccgcagccctccgtgttctaccagatgccgcagagtgagagcatctacgagcagcgcaac
aagcgcttccaggaggtctacggcttcaacgactccttcagtagcaccgactcagtccac
gagccgctgctgcccccagcattgcccccgaaacaaaggcaactgagcgagagcgcgaat
gacgagggcggggagggggagtacgtcaacttgtactcgtccagccaggccaatggggag
ctgcctctctccctcagagaaacgatcgcagctgacgatgtacttcaggaccccacccct
cagatgccatccactaatagcaaagaggcattggacaaggaaaggaggcagaagtcaacc
gagtcggctgggagtgacgaggaagacgtggatgagctctccctcatcgaccacaaggag
attatgagcaggataacactaaaacaagagaatgacgatggtcctgacgttcgcgccgga
tcaggagacattctgttagtccacgctacagaaacagaccgcaaagatcttgttttgtac
tgtgaagcctttctgactacatataggacttttataacccccgaggacctcattaagaag
ctacactacagatatacccggttctgccacagtccggacaccttcaagaagcgcgtcagc
aagaacactttctttgtgctggttcgtgtggtggacgagctgtgcctggtggagctgaca
gaagacatcttgaaacagctgatggacctggtgttcacgctggtgtgcaatggcgagctc
agcctcgcccgcgtgcttcgcaagaacatcctggacaaggtggagcagaagaaactgctg
cgctacacaaactccctcaagccactcgcggcccgaggggtatctgcaagacctggaact
ctccatgacttccgtagtcatgagatcgctgatcagctcactcttctcgatgctgaactc
ttctataaaattgagattcccgaagtgctgctttgggcaaaggagcagaatgaggagaag
agtccaaacctgactcagttcacagagcactttaacaacatgagctattgggtacgttct
ttgataattcagcaggagaaagcccaagacagagagaagctgcttctcaagttcatcaag
ataatgaagcacttaagaaagttgaataatttcaattcctacctggcaatactgtccgcc
ttggactcagcccccatccggagattggagtggcagaaacagacctcagagggattggag
gaatattgcacgttgatcgacagctcctcgtccttcagagcatacagagctgctctggct
gaagtggagcctccatgcatcccgtacctgggtctcattctccaggatttgacattcgtc
cacctggggaaccctgacctcatagacgggaaggtcaacttctccaaacgctggcagcag
ttcaacattctggacagcatgcggcgcttccagcaagtgcattatgagctgaagcgcaac
gaagacatcgtctcgttcttcaacgacttcagcgaccacctggcggaggaggcgctgtgg
gagctatcgctgaagatcaagcccaggaacatcgccaggcgcaagacggaccgcgaggag
aagacctag
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