Scomber scombrus (Atlantic mackerel): 133994934
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Entry
133994934 CDS
T10651
Symbol
igsf9a
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein igsf9a
KO
K22655
immunoglobulin superfamily member 9
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ssco04515
]
133994934 (igsf9a)
Cell adhesion molecules [BR:
ssco04515
]
Immunoglobulin superfamily
Other
133994934 (igsf9a)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
V-set
fn3
Ig_4
FN3_DSCAM-DSCAML_C
C2-set_2
Ig_VEGFR-1-like_5th
Ig_5
Fn3_VIN3
Pur_ac_phosph_N
Motif
Other DBs
NCBI-GeneID:
133994934
NCBI-ProteinID:
XP_062290163
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All DBs
Position
15:18294807..18352071
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AA seq
1635 aa
AA seq
DB search
MGSSRSYSQTCTVVGVLCLFFTIEGASSEVRGKVGGVVELECIFPQSDPVGVSSASLHVV
EWVRQGLDIAVLIKFGSHTPRVHPQYEGRVSLVRITTLRLEGLQLDDQGLYECRILYLLD
EPTDERRNGTWTLLSVTAPPTFTHSPPPVVEGLVGSHLSLACVANGNPIPTITWLKDGSV
IERKKYQEGALSLRAVSMQSAGQYTCHASNSEGNVTRVTKVEIKGPPVIIIPPKSTSLNM
SQKALLRCQAVANPPNMTYVWQRGGENVYHIESLKSRVKIMVDGTLLISRLIPQDSGNYT
CMPTNGLLTPPTASATLTVMHPAQALQMPQKTYLPTGMDGMVRCPVAAQPPLLRVDWTKD
GEPLDLSLYPGWTLTPDGSLFMATVNDDAVGTYVCTPYNSYGSMGPSGPTKVILQDPPSF
SITPEKQYTQEVGRTLLIPCQGNQDPTIKVTWSKVDLVRRMSYSIEPNGSLLLQPLIKDH
QGVWECNIVNRVASVKARTQVFVLGTSPYAATSLSVSPGVKQANISWEAGFDGGSAQTFS
VWVKKISGSDNDGRQEWFSVPVPASSGNRLQVTDLSPATDYQFSILSHNKMGTGPFSEIA
TIRTLDPLPRRSKPKPPASLSANQGSAGVVLQWSLPEAQHPPITGFVLQSRTEQGEWFNL
DEDISANSSGIVVPGLHKDCVYELRLLSRRGELLSEPSPSVNVSTVGMEIYPATSRLLEF
VPEPLLAGVLGGVGFMCLALALLLGSACVISHKRDQRRRKKKDVNHPSLLSLKSPSAIYK
SSPSRKTPGTGSPDSVLKKSLLPGSILYPTTSSATSPSSQTYGSSSADNHHRQKQLQSSY
SRGSISRTTSSPLSPSIELIARGPDGRFLLPAFDHDTLSIHSKKSLRYDHSASVRRSVSL
RSDKSDRKGLPFVLSVDLPLHKQANSSSQICATVQHLPDYDPYILDQKANYGGFPDLRSL
CSNSSFTTIPPQDRNLSPTFPMLPHIRSSLGQPSTTASTLVLQMEHERERGNLSHCLKLA
QEREEMEKELQKYTLQRNSMREMRMEQPDSENREDEGYERVWNYKSSTLPHRYPQGNKDI
FGLSQSLYTSPSVHWEGRPLVSPPTQIPPRTSFNVSTPSSLSCFQSGNHHPTLPFTKQTP
LRSEEAGSVSKDRLTLPHLYSKHQRYERVEAAPEGYDNSPQSTVLEMQTNDSCSEPRRQN
NLSHGSLSTLSFHSNKFTEGSNSALSAVPDSSKAEVAFPEPTDEDMCVEMSVDEPDIEVC
VMRPTKPMLHHRIASHVQHGRPLTRRDRYEDMRRSTSFDCRSPASVDDIVRVRASLQSPE
QELWRAVSRGSKPWDAKQRSQSLDLRRRKEKGFLAPDAWIDSLSQENCSISSPCHPDSVF
WEPQSCPTRKILNSPASSSTQTGSLSPHAVDPLASRSSPQTPIANPDVPRHYEPRSETPV
LLNAAKWPGAYQEAVKEAGGYVEAMKEASRCFLPNNGGLHDNEDVLEVEAGGYEGELESG
SGYNSYASSGRGSMEPANRRLSFCHLSPTLTISPETVEEYEGSTEDKYRHQIEPCQRRKP
SVDENYEWDAADYCSQPGDHDGLLPSLDLQKPALFCSLPSMQCSTEALKNCTQLSLLPGH
QSSCSAEPEPDTVLF
NT seq
4908 nt
NT seq
+upstream
nt +downstream
nt
atggggtcatcaagatcatattcgcagacttgcactgtggtgggagttctttgcctattt
tttaccatcgaaggtgcgagttcggaagtgcgtggaaaggtcggaggtgtggtggagttg
gagtgtatttttcctcagtcagacccagtaggtgtgtcctctgcgtccctgcatgtagta
gaatgggttcgacaaggactggacatcgccgtcctgatcaaatttggatcccacacacct
cgcgtccatccacagtatgaggggcgggtgtctctggtacgaatcaccactctgaggctg
gagggcctgcagctggatgaccagggcttgtatgaatgtcgtatcctctacttactggat
gaacccacagatgagcgccgaaacggcacctggaccctgctttctgtaactgctccaccc
acctttacccattcgccacctcccgtggtggagggtcttgttggaagtcacctctctctg
gcctgcgttgctaatggcaaccctattccgaccattacctggttaaaggacggcagcgtg
attgaaagaaaaaaatatcaggaaggagccttatctttgcgagcagtgagcatgcagtcg
gcaggacagtacacctgccacgcctccaactcggagggaaacgtgactcgcgtgacaaaa
gtggagatcaaaggtccgcctgtcatcatcattcctcccaaaagcacctctctcaacatg
tcccagaaagcccttctccggtgccaggcagtggctaacccccccaacatgacctacgtg
tggcagagaggtggagaaaacgtctatcacatagagtctttgaagtcgcgagtgaagatc
atggtagatggtactctactcatctccaggctcatcccacaggattctgggaactacacc
tgcatgccaaccaatggcctgttgaccccaccgaccgcctctgctaccctcacagtgatg
cacccagcccaggctcttcagatgccccagaaaacttatcttcccacaggcatggatggc
atggttaggtgtccagtcgcagctcagcctcctctgctccgtgtggattggacgaaggat
ggagaaccacttgacctgtccttgtatccaggatggaccttgacaccagatggctctttg
ttcatggccacagtcaatgacgacgcagtaggcacgtacgtgtgtactccatacaacagc
tacgggagcatgggtccatctgggccaacaaaagtaattctgcaggaccccccatcattc
agcatcactccagagaagcagtacacacaggaggttggtaggaccctactcatcccatgt
caaggaaaccaagacccaacaattaaagtgacctggagcaaggtcgacctggttcgtcgc
atgtcctactccatcgaacccaacggatctcttctgctgcagcctctcatcaaggaccac
cagggggtgtgggagtgcaacattgttaaccgcgtagcctcggtgaaagcgcgcacgcaa
gtcttcgtgctgggaaccagtccctatgcagctacctctctgtccgtctctccaggggtg
aagcaggccaacatatcctgggaggcaggctttgatggaggatcagcacagacattttca
gtttgggtgaagaagatttcagggagtgataatgatgggaggcaggagtggttctctgtg
cccgtgcccgcttcctctggcaacaggctgcaggtgacagacctgtctcctgccactgat
taccagtttagcatcttgtctcacaataaaatggggacgggacccttcagtgaaatcgct
actatacggactttggatcctctgccaagaagaagtaaaccgaagccccctgcatcactg
tctgctaatcagggctcggcaggtgttgttcttcagtggtcccttcctgaagctcagcac
cccccaatcacaggctttgttctccaatctcgcaccgagcaaggggagtggtttaatttg
gatgaggacataagtgctaacagtagcgggatagtcgttccgggtctccacaaggactgt
gtgtatgagctgcggctgctatctcgtcgcggggagttgctgagcgagcccagtccatca
gtcaatgtctcaaccgtggggatggagatataccccgccacgtcccgactcctggagttc
gtcccggagccattacttgccggtgtgctgggcggggtcggcttcatgtgcttggcactg
gctttgctgctggggtccgcctgtgtcatcagccacaagagggaccagcggcgcagaaag
aagaaggatgtaaaccacccctcactcctgagcctcaaatccccctctgccatctataaa
tcctccccatcaagaaagactccaggcaccggcagtccagacagtgtgttgaagaaaagc
ctactaccaggcagcatcctctatcccaccacttcctctgccacctccccctcctcgcaa
acatacggttcctccagcgctgataatcatcatcggcagaaacaattacagtccagctac
agtagagggagcatttctaggacaacatcttctccactctctccttcgattgagttgatc
gctagaggtccagatgggcggtttttactcccagcatttgaccatgacacactgagcatt
cacagcaagaaaagtttaagatatgaccattccgctagcgtccgaaggtccgtgtcgctt
cgctcggacaagtcggacaggaaagggctgccgtttgttctctctgttgatctcccactt
cacaaacaagctaattcctcaagccaaatctgtgctacagtccagcacctccctgattat
gatccttatatattggaccagaaggcaaactatggtggctttcctgacctccgcagcctg
tgttcaaacagtagttttaccaccattcctcctcaagacagaaacctatctcccactttt
ccaatgctcccacatattcggtccagccttggtcagccttctacgaccgccagcactcta
gtgctccaaatggagcacgagcgggagagagggaacctgagtcactgtctgaaactggct
caggagagggaggagatggagaaggagctccagaagtacacactgcaaagaaactccatg
cgagaaatgaggatggagcagccagactcagagaacagagaggatgaaggttatgagcgt
gtctggaactataagagcagcaccttgccacatagatacccccaaggcaacaaggacatc
tttggcttgtctcagagcctttacacttcaccttctgtccactgggaaggccgtcctctt
gtctctcctcccacacagatcccacccaggaccagtttcaatgtatctacaccttcaagt
ctttcttgttttcagtcaggcaaccatcaccccactctgcccttcaccaaacagaccccc
ctccgatctgaggaggcaggcagtgtttccaaagacagattaactctcccacatctttac
tcaaagcaccagagatatgaaagggtagaggcagcaccagagggctatgataattcacca
caatccacagttttagaaatgcaaacgaatgattcatgctctgagccacggagacagaac
aatcttagtcatggcagcctttcaacgttgtctttccatagcaataaatttactgaagga
tctaattcagctctcagtgctgtgccagactcttcaaaagcggaggttgcattccccgag
cccactgatgaagacatgtgtgttgagatgagtgtagatgagccagatattgaggtatgt
gttatgcggcctacaaagccaatgctgcaccacagaattgcctctcatgtgcaacacggg
cgcccgctgacccgcagagaccggtatgaggatatgaggaggagcacaagctttgactgc
cgtagtcctgcctctgtggacgatatcgtcagggtccgagcttctttgcaaagtccagaa
caagaactctggagagccgtgagccgaggctctaaaccctgggatgcaaagcagcgaagt
cagagtctagacttaagaagacggaaagagaaaggtttcctggctcctgatgcatggata
gactctctcagccaagagaactgctctatttcatccccctgtcacccagactctgtgttc
tgggaaccccagagctgtcccaccaggaagatcttgaattctcctgcaagttcttctacc
caaactggctccctatcacctcatgctgtggatcctttagcttcaaggagcagtccacag
acgcctatagcaaatcctgatgtgcctcgccactacgagccaagaagtgagacacccgtc
ttactcaatgctgccaaatggccaggcgcctaccaggaggccgtgaaagaggcaggcggt
tacgtggaggccatgaaagaagcttccaggtgctttctgcccaacaacggtgggctgcac
gataatgaagacgtgctggaagtggaggcaggaggctacgagggagagctggagtctggg
agcggttacaacagctatgccagcagcggccgagggagcatggagcctgctaacagacgc
ctgtccttctgtcacctttccccaaccctcaccatctcacctgagactgtagaggagtac
gaggggagcacagaggacaagtatcgccaccaaatagaaccctgccaaaggagaaagccc
tcagtggatgagaattatgagtgggatgctgctgattactgctcacagcctggagaccat
gatggcctgcttccttcattggatctacagaaacctgctctgttctgtagccttcccagc
atgcagtgctccactgaggcactgaaaaattgcactcagctctctttgctcccggggcat
caaagcagctgctctgctgagccagaaccagacaccgtgctgttctga
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