Scomber scombrus (Atlantic mackerel): 133994987
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Entry
133994987 CDS
T10651
Symbol
csgalnact1a
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
ssco01100
Metabolic pathways
Module
ssco_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
133994987 (csgalnact1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ssco01003
]
133994987 (csgalnact1a)
Enzymes [BR:
ssco01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
133994987 (csgalnact1a)
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
133994987 (csgalnact1a)
Glycosyltransferases [BR:
ssco01003
]
Glycan extension
O-Glycan
133994987 (csgalnact1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
ATG14
LXG
PEP-utilisers_N
Motif
Other DBs
NCBI-GeneID:
133994987
NCBI-ProteinID:
XP_062290210
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Position
15:complement(11002632..11023225)
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AA seq
594 aa
AA seq
DB search
MLLEVMLRRGLLAKVSRVGGVLVLLCCSLSLIYVMTCSPPHSDDPPLSHALPRASPNHPS
LGGIGPGVAAGVGGTGGAGAGPAQSGGPPGVQSYQALLQEREEQHRLHISSLKKQIAQLK
EALQERSQQLKGVQESLKRVAGGPAEGQEAGAVAQGGGLGETQGAKSQQADLQEFLRSQL
SKAEVTAGTRLPSEYAVVPFESFTLQRVYQLEMGLTRHPEEKPVRKDKREELGEVLETAL
HSLNSPTSQQDSRGAAEKNQGSKVYTPSDFIEGITRTEKDKGTLYELTFRGESSNEFRRL
ILFRPFGPLMKVKNERIDTASVPINIIVPLSKRTDKFKQFMHNFREVCVRQDGRVHLTVV
YFGKEQMSEVRSTLENTSREVNFKNYTLLQLDEEFSRGRGLDIGARSWKGGNVLLFFCDV
DIYFTADFLNTCRLNTQPGKKVFYPVLFSQYNPTLIYGSPEHIPPVEQQLVIKKDTGFWR
DFGFGMTCQYRSDFINIGGFDIDIKGWGGEDVHLYRKYLHSNLLVVRAPSRGLFHLWHEK
QCADELPPDQYRMCMQSKAMNEASHGQLGMLFFRHEIEAHLRKQKQQNSNPKKT
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgctacttgaagtgatgttgcggcgtggattactagccaaagtctcccgtgttggagga
gtgctggtgctcctctgttgctccttgtcactcatctatgtgatgacctgcagtccccca
cactcagatgaccctccattgagtcacgctctgccccgcgccagtcccaaccacccaagc
ctggggggtatagggccaggggtggcagcaggagtcggcggtacaggaggagcaggagca
ggacctgcccaaagcggcggacctcctggtgtccaatcttaccaggcactcctccaagag
cgtgaggagcaacaccgcctccatatctcctccttgaagaagcagatagctcagctgaaa
gaagctctgcaggagcgaagccaacagctgaaaggagtacaggagagcctgaagagagtc
gctgggggcccagcagagggacaggaagctggggctgtagcccaaggagggggtcttggg
gagactcagggagccaagagccagcaggcggacctccaggagttcctcaggagccagctg
tcgaaagcagaggtgactgctgggaccaggttgcccagcgaatatgcggtggtgcccttt
gagagtttcacactgcagagggtgtaccagctggagatgggactgacgcgtcaccctgag
gagaagcctgtgaggaaagacaagagagaggagttgggggaggtgctggagacggctctg
cacagccttaactcgcccacatcccaacaagacagcaggggtgcggcggaaaagaatcaa
ggtagcaaagtctacacgccgtctgacttcatagaaggtatcactcgtacagagaaggac
aaagggacgctgtatgagctgacgttcagaggggagtcgagtaatgaattcagacgcctg
atcctcttccgtcccttcgggccactgatgaaggtgaaaaacgagaggatcgacacagcc
agtgtcccaattaacatcatcgtcccgctgtccaaacgcacagacaagttcaaacagttc
atgcacaacttcagggaagtctgtgtgcgtcaggacggccgggtccatctgacagtggtg
tattttgggaaagagcagatgagcgaagtccgcagcacactggagaatacatccagggaa
gttaattttaagaactacactttgctgcagctggacgaggagttttctcgaggacgaggt
ctagacatcggtgctcgatcttggaagggaggcaatgtgctccttttcttctgcgacgtg
gacatctacttcaccgctgacttcctcaacacctgccgtctcaacacgcagcctggtaaa
aaggtgttttacccggtgttattcagccaatacaatcccactctgatctatggaagtcct
gagcacatcccacctgtggagcaacagctggtgatcaagaaagacacagggttctggagg
gattttggtttcggtatgacctgccaatacaggtccgactttattaacataggaggtttt
gatattgacatcaaaggctggggcggtgaagacgtccacctctacagaaagtacctccac
agtaacctcctagtggtccgagcgccatcacgcggcttgttccacttgtggcatgagaag
caatgtgccgatgaactccctccagaccagtaccgcatgtgtatgcagtccaaggccatg
aatgaggcctcgcatggccagctggggatgctgttcttccggcacgaaattgaagctcac
ctccgcaagcagaaacagcaaaactcaaaccccaagaagacataa
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