Scomber scombrus (Atlantic mackerel): 133995043
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Entry
133995043 CDS
T10651
Symbol
ythdc1
Name
(RefSeq) YTH domain-containing protein 1 isoform X1
KO
K20100
YTH domain-containing protein 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssco03041
]
133995043 (ythdc1)
Spliceosome [BR:
ssco03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
133995043 (ythdc1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
133995043
NCBI-ProteinID:
XP_062290304
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Position
15:complement(76476..90187)
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AA seq
690 aa
AA seq
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MAADRREDKDGELNVLEDILTEAPDQDDELYNPETERHVSDKKGTKRKSERSDSQDLKRL
RPSSGHAPSRSSSTNKRGAGAPLPSSSSKKVVSSPRGRPAATGYRQEYYDERKGRRVSRE
ATRSRGGEEARRRESQRGLEGLSQKLRRDERRTSPSPQQEDNQSEEETAAEYGSEQGSGS
SSPAASHVEEEDDQEEEEEEEEEEGMEEEEEEEEEGEKEDEEEEEEEEEYERRGGEGNDY
DTRSEAGDSRSASSVSFSDDGESARSGSASEASGSEKKREKLSSSVRAVRKGMETSPCVV
SDPTSKLRYILRDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVMLVF
SVRESGKFQGFARLASESHHGGSPIHWVLPAGMNAKMLGGVFKIDWLCRRELPFTKTAHL
SNPWNEHKPVKIGRDGQEIQPDIGAQLCALFPLDESVDVHQVARRIRHKRRTPSEPRPRG
RPPQREPGRRRPEEYDLHGRKRPRADCPPDFNQRAGFIQDLRNQPVDRRFSSVRRDVFLN
GSYNDYMRDYHHSVGPPAPWQTLAAYPGVEQPPPHHPPYYHHSHPPPPPHQAYHHHHHPP
LPPHEAPPPRFRDKQRAAPPHRAFASSPHDYDMRVDDFLRRTQAVVSSRRERERQRERER
GGPRRERERERARDRDRERERDKERGRYRR
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgaccggcgcgaggacaaagacggagaactgaatgttctggaagatattttg
actgaagctccggatcaagacgacgagctttacaacccggagactgaacgacacgttagc
gacaagaaaggaacgaagaggaagagtgagcgctccgacagccaggatctgaagaggctt
cggccgtcctctggccacgccccctccaggtcctcgtccaccaataagagaggtgcaggt
gccccgctgccctcctcctcctctaagaaggtggtgtctagcccccgcgggcgccccgct
gccaccggctaccgacaagaatactatgacgagcgaaaggggcggcgagtgtcccgagag
gcgaccaggagccgcggaggagaagaagcacggcggcgagagtcccagcgaggcctggag
ggtctaagccagaagctgcggcgtgatgagcggcggactagcccctccccccaacaggag
gacaaccaatcagaagaggagacagcagcagagtatggctcagagcagggctcaggaagc
tcctctcctgccgcctctcatgtagaggaggaagatgatcaggaggaagaggaggaagaa
gaagaagaggagggcatggaggaggaggaagaggaggaggaggagggagagaaggaggat
gaggaggaagaggaagaagaggaggagtatgaacgtcgtggcggcgaggggaacgactac
gatactcgcagtgaggccggcgactcgcgttctgcttcctccgtcagtttctctgatgat
ggcgaatcagctcgctccggctccgcctctgaggcttcaggttcagagaagaaacgggag
aagctgtcgtcgtcggtccgagcggttcgcaaagggatggagacctctccctgtgttgtt
tcagatccaaccagtaagctgcgctacatcctgcgagacgctcgcttcttcctcatcaag
agcaacaaccacgagaatgtctccctcgctaaagctaagggcgtgtggtcgacgctgccg
gtgaatgagaagaagctgaacgcagctttccgctcagctcggagcgtcatgctcgtcttc
tctgtgagggagagcggcaaattccaaggttttgctcgtttggcatcagagtctcatcac
ggcggctctccgatccactgggttcttccagctggcatgaacgccaagatgctgggagga
gtctttaagatcgactggctctgcaggcgagagcttcccttcacgaagacggctcacctg
tcgaatccctggaacgaacacaagcctgtgaagatcggacgagacggacaggagatccag
ccggatattggcgctcagctctgtgccctgttcccattggacgagagcgtagatgtccac
caggtggcccgccgcattcgtcacaagcgtcggacgccgtcggagccgcggcctcgaggc
cgaccgccacagcgtgaaccgggaaggcgtcgacctgaagagtacgacctccacggcagg
aagcggccgcgcgcagactgtccgcccgacttcaaccagcgagcagggttcatccaggac
cttcgtaaccagccggtggacagacgattttccagcgtgagacgagacgtattcctcaac
ggatcttataacgactacatgagagactatcatcacagcgtcggccctccggctccttgg
cagactctggcggcataccctggcgtggagcagccccccccccaccaccccccctattac
catcacagccacccgcccccccctcctcaccaggcctaccaccatcaccaccaccccccc
ctaccgccacacgaggctccgccccctcgttttagagacaaacagagagcagcgccgccg
caccgcgccttcgcctccagcccgcacgactacgacatgcgtgtggatgacttcctgcga
cggacacaggcggtggtgagcagccgtcgggagcgtgagcggcagcgtgagcgcgagcgt
ggcggaccgcgccgtgagagagagcgagagcgagcgagggaccgagaccgagaaagagag
agggacaaagagaggggacggtaccgccggtga
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