Scomber scombrus (Atlantic mackerel): 133995062
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Entry
133995062 CDS
T10651
Symbol
pax8
Name
(RefSeq) paired box protein Pax-8
KO
K09293
paired box protein 8
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133995062 (pax8)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
133995062 (pax8)
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Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
HTH_Tnp_IS1
DUF6115
Motif
Other DBs
NCBI-GeneID:
133995062
NCBI-ProteinID:
XP_062290331
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Position
15:complement(2509990..2518945)
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AA seq
464 aa
AA seq
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MSHNTGRGHGGLNQLGGMFVNGRPLPEVIRQRIVDMAHQGVRPCDISRQLRVSHGCVSKI
LGRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGVCDSDT
VPSVSSINRIIRTKVQQPFNLPLDGKGLSPGQTLIPSSAVTPPESPQSDSLGSTYSISGL
LGIPQPSTEGKRSHDDSDQESCRHSVDSQGSGGIPRKQMRVDHFSAASQHLDCGFDRHHY
PPDSFGSASGSKTEQTLYPLSLINGSLDEAKTSLSTSSSAIGRNLTAHQSYAMVTEPLQS
LPLCLKQEMSPEVTSTSPSPNVAAASNLAFVELQALQKPMHVSNSCSSSSNHFPNAFNSF
SHHAPVYGQFSSQSIISGRDMVSSTLPGYPPHIPSPAQSGYTTSAITGMVAAGADYSGQT
YSHSPYTTYSEAWRFTNSSILGSPYYYSSASRTAPPSAAGYDHL
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtcccataacaccgggagaggtcatgggggtcttaaccaactaggcggaatgtttgtt
aatggccgtccacttccggaggtgatccggcaacgcatcgtggacatggcccaccagggc
gttcggccttgtgacatctcccggcagctccgagtgagtcacggctgcgtcagcaagata
ctgggacgttactacgagacgggcagcatcaagcccggcgtgatcggtggctccaagccc
aaggtggccaccccgaaggttgtggacaagatcgcagagtacaagaggcagaatcccacc
atgttcgcctgggagatccgagaccggctgctggcggagggagtgtgtgacagcgacacg
gtgcccagcgtgagctccattaacagaataattcgaacaaaagtccagcagccgttcaat
ctgcctctggatggaaaaggcctgagtccaggacaaaccttaatccccagttctgcagtc
acccctccagagtctccacagtcggactctttgggctccacctactccatcagcggcttg
ttgggtatcccccaacccagcaccgagggcaagaggagccacgatgacagtgaccaggag
agttgtcggcacagcgtggactctcagggcagcggaggcatcccgaggaaacagatgaga
gtggatcacttctccgcagcctcgcaacacctggactgcgggtttgatcgtcaccactac
ccaccggactctttcggctccgcctctggtagcaagacagagcagactttgtacccactg
tccctcatcaatggcagcttagacgaggccaagaccagcctctcaacatccagctccgcc
attggacggaatctgacggcacaccagagttacgccatggtgaccgagcccctacagtcc
ctgccgctctgtctaaaacaggaaatgtccccagaagtgacgagcacgagcccctcccca
aatgtggcggcagcatccaacttggcgtttgtcgagctgcaggcgctgcagaaacccatg
catgtcagcaacagctgcagcagcagctccaaccatttccccaatgccttcaactcattc
tcccatcatgcaccagtgtacgggcagttcagcagtcagtctatcatctcagggcgtgac
atggtgagctccaccctgccgggttacccacctcacatcccctcccctgcccagtcagga
tacaccacctctgccatcactggcatggtagcagcaggtgcagactactcgggtcagacc
tacagccactcgccatataccacctacagtgaagcctggaggttcaccaactccagcata
ctgggttcaccctattattacagctcagcctcccgcaccgctccaccctctgctgcaggc
tacgaccacctctag
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