Scomber scombrus (Atlantic mackerel): 133995087
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Entry
133995087 CDS
T10651
Symbol
ric1
Name
(RefSeq) guanine nucleotide exchange factor subunit RIC1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133995087 (ric1)
Membrane trafficking [BR:
ssco04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
133995087 (ric1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RIC1_2nd
RIC1
ANAPC4_WD40
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
133995087
NCBI-ProteinID:
XP_062290356
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All DBs
Position
15:3050699..3091385
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AA seq
1449 aa
AA seq
DB search
MYFLTGWPRRLLCPLRSEEEPFYIQPSSQRFYFAVLSETQLSIWFSRPSVLIVSYIESAK
AAAQFGFYQKAEWKPDDSMIAVATAKGYILLFDVLGGGDDKYLYEPVYPKGSPRVKVTPG
YKEEQCAPALSLEMKKPVDLEAPITSLQSLQEDLLVCTADGYLHVLHWDGLGSNGRKAIC
LTTIPFSLDLQSARGGPSLDLEGVHIRCMEYCVTLDGFAVVLSDGRLGFITPLSNIITAD
QLQGVWAADVTDGTCVAVNNKYRLMAFGCASGSVLVYMIDTTTGSMQLSHKLELTPKHYP
DTYNKTGPVKLICWSPDYSVAMVTWECGGLSLWSVFGAHLICTLGEDFAYRSDGTKKDPI
KISSMSWGAEGYHLWVIPNKQERRKQQEEQQEEKEGEEVEMVPPPQSSQQPGILQFHFIK
SALTVNPCTSNQEQVLLHGEDRLYLTCGDPTQVHNTSDTHPHTHMHPHDSSPLHNPPNPE
SSLSQGLSTLLGHKHWHVVQIHSTYLESNWPIRFAAINTEGQCMAVAGRRGLAHYSLFTR
KWKLFGNITQEQNMTVTGGLAWWKDFVVVACYNFIDQQEQLRLYQRSSNLDNAFASVTKL
QSDTLLLNVFRDMVILFRADCSICLYSIERRNDSPNPSASVELLQEVSMSRYIPHPALVV
SVTLTSVRTETGITLKAPQQACMAESIMLNLAGQLIMLHRDRSGPQVREKETPANNKKQL
PFCPPVVLAQCVENVWTTCRSNRKKRHLLEALWLSCGEAGMKVWLPLFPRDHRKPHSFLS
RRIMLPFHINIYPLAVLFEDALVLGATNETVLYDGLQGSSEPLEALFPFCTVERTSQIYL
HHILRQLLVRNLGEQALMLAQSCASLPYFPHVMELMVHVVLEEEATSREPIPDPLLPTVA
KFITEFPLFLQTIVHCARKTEYALWNYLFAAVGNPKDLFEGCLMARDLDTAASYLIILQN
MEVPAVSRQHATLLFNTALEEGKWDLCRHMIRFLKAIGSGEMDTPPPTPTTQEPSSSGGF
EFFRNRSISLSQSADSITTGKFNLQKTFSMPTGPSAKGRDVECAENMYIDLMLWRHARHL
LEQVRLRDLGCFSAQLGFELIGWLCRERNRVARVDDFVLALKRLHKDFLWPFPVIPVGSL
SSPLKNGRCRTVLSTRLLKSQSADSLLNSDMDTAPPQAAPSNHTWLDGIGERTKDMDTAS
SAHSNQHSPQTHDAFLSLLTNKVEEYSIGSATDLTETSSVVDGDWTMVDENSSTLSLSQA
ELEHISMELANKGPHKSQVQLRYLLHVFMEAGCLEWCVVIGLILRDANVIKQVISFLDSP
EVPTETVQSVRNGLLAVDTWASTDCLGYKPFLNLIQPHLQQLMDSAAEQVQPEAFQPVSQ
ISKLGGSEGLGGAALPRPEDSRGAAAPLGLALPSIEPAGGFPRPPSEDCPPEQTEEQGDE
EGNYDCTLS
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgtattttcttaccggctggccccggaggcttctttgtccgctgaggagtgaagaggag
cccttctacatccagcccagctcgcagaggttttacttcgccgtgctctcggagacacag
ctcagcatctggtttagtcggcccagtgttttgatagtcagctatatcgagtctgcaaag
gcggccgcccagtttggcttctaccagaaggcagaatggaaaccagacgactccatgata
gctgtggcgactgccaaaggctacatcctcctgtttgatgtgctgggtggaggggatgac
aagtacctatatgagcctgtctacccaaaaggaagtcctcgtgtgaaggtgaccccgggc
tataaggaggagcaatgtgcccctgctctgtctctagagatgaagaagcctgtagatctg
gaggcccccatcaccagtctccagtccctccaggaggacttactggtgtgcaccgcagac
ggctacctccatgtgctgcactgggacgggctgggcagcaacggacgcaaggccatctgc
ctcactaccatccccttctcactagacctacagtctgctcgaggtggtccctctctggac
ctggagggagtgcatatccgttgtatggagtattgtgtaaccctggacggcttcgctgtg
gtactgagcgacggacgcttgggctttatcacaccactcagcaacatcatcacagcagat
cagctgcagggcgtctgggcagcagatgtgactgatggcacctgcgtggccgtcaacaac
aaatacagactgatggctttcggctgtgccagtggctcagtgctggtctacatgatagac
accacaacaggatccatgcagctctcccacaaactggagctcaccccaaaacactaccca
gacacctacaacaagacaggcccagtcaagctcatctgctggtcacctgactacagcgtt
gccatggttacatgggagtgtggaggcctgtcgctgtggagtgtctttggagctcaccta
atctgcactctgggagaggattttgcgtatcgttctgatggtaccaagaaggatcccatt
aaaatcagctctatgagctggggagcagagggctaccatctgtgggtgatccctaacaaa
caggagaggaggaagcagcaggaggagcagcaagaggagaaggagggggaggaggtagag
atggtgccacctcctcagtcctcccagcagcccggcatactgcaattccacttcatcaag
agtgctctcacagtgaacccctgcacgagtaaccaggagcaggtgttacttcacggtgaa
gaccgcctttatttgacctgtggcgaccccacacaggtccacaacacctctgacacacac
ccacacacacacatgcacccacacgacagcagcccactgcacaacccccccaaccccgaa
tcctctctctctcagggactcagcactttacttggacacaagcactggcacgtggtccag
attcacagcacatacctagagagcaactggcctataaggtttgcagccataaacacagaa
ggccagtgcatggctgtcgcagggaggcggggcttggcacactactctttattcacgagg
aaatggaaactgtttggaaatatcactcaggagcagaacatgacagtaacaggcggtctg
gcttggtggaaagactttgtggtggtggcctgttacaattttatagaccagcaagaacag
ttgaggctctatcaacgatcatccaacctggacaacgcctttgcctcggtcacgaagctg
caatcagacactctgctgctcaacgtcttcagagacatggtcatcttgttcagagctgac
tgctccatctgtctctatagtatagagaggcggaacgacagtccaaacccgtcggccagc
gtggagttgctgcaggaagtgtcgatgtctcgctacatcccacaccctgccctagtggtg
tctgtcacactcacgtctgtgcggacagagactggcatcacattgaaagccccgcagcag
gcctgcatggcagagagcatcatgttgaatctggctggccagttgatcatgctacacagg
gaccgttcggggccgcaggtacgagagaaagagacgcccgccaacaataagaaacagcta
ccattctgtcctccggtagtgctggcccagtgcgtggagaatgtgtggaccacatgtcgc
tccaacaggaagaaacgccacctgctggaggccctgtggttgtcatgtggtgaggcgggc
atgaaagtctggctgccgctgttcccccgagaccaccgcaagcctcactccttcctctcc
aggcgcatcatgctgcccttccacatcaacatctacccgctggccgtgctgttcgaggat
gccctggtactgggggcgaccaatgagaccgtgctgtatgacgggctgcagggttcctcg
gagccactggaggcgctgttccccttctgcaccgtagagagaacctcccagatctacctc
caccacattctgaggcagctgctggttcgcaacctgggtgaacaggctttgatgctggct
cagtcgtgtgcctcccttccctatttcccccacgtcatggagctgatggtgcacgtggtg
ctggaagaagaggcaacatcgagagagcccatccctgaccctctgctgcccaccgtggcc
aagttcatcaccgagttccccctctttctccagaccatcgtccactgtgcccggaagacg
gagtacgccttgtggaactacctgttcgctgctgtggggaaccccaaggatctgttcgag
gggtgtctcatggctcgagatctggacacagcagcctcctatctgattatactgcagaac
atggaggttccagcagtgagcagacagcacgccactctgctcttcaacacggcgcttgag
gagggcaagtgggacctctgccgacacatgatccgattcctcaaagccatcggctctgga
gagatggataccccgcccccaactcccaccacacaggaacccagctcaagtgggggtttt
gagttcttcagaaatcgcagcatcagcttgtctcagtcggctgactccatcactacgggc
aagttcaacctgcagaagaccttcagtatgcccactggaccttctgctaaaggtcgggat
gtggagtgtgcagagaacatgtatattgatctgatgctctggcgccacgcccgccacctc
ctggagcaggtacgccttcgtgacctggggtgtttctcagcacagctgggcttcgagctc
atcggctggttgtgtcgtgaacgaaaccgcgtggcccgcgttgatgatttcgttttggcg
ttaaagagactccacaaagattttctctggccattccctgttatccccgtgggaagcctc
agctcaccgctgaagaacggacggtgtcgcacagttctgagtacacggctgttgaagtcg
cagtcagctgacagcttgctgaacagtgacatggacacagcgccccctcaggctgctccc
agcaaccacacctggctggacgggatcggggagaggaccaaagacatggatacagcctcg
tctgctcactccaaccaacactcaccacagacacatgacgctttcctgtcactgctcacc
aacaaagtggaggagtacagtattggctcagctacagacttaacagagaccagctcagtg
gtggatggtgattggacgatggtcgatgagaactcctcgactctgagtctcagccaggcc
gagctggagcacatctccatggagcttgccaacaaaggcccgcacaagtcgcaggtgcag
ctcaggtatctcctccacgtgttcatggaggcgggttgtctggagtggtgtgttgtgatt
ggtttgatactgcgggacgccaatgtcatcaagcaggtcatcagcttcctggacagcccc
gaggttcccacagaaactgttcagagtgtccgaaacggcttgttggctgtcgacacgtgg
gcctctactgactgcctgggatacaaaccatttctcaacctgatccagccgcacctacag
cagctgatggattcagcggctgagcaggtgcagcccgaggccttccagcccgtcagccag
atctccaaactcggcggctctgaggggctgggaggcgccgctttaccacgtcctgaggac
agcaggggagcagcggctccactgggcctggccctgccctccattgaacctgctggaggt
tttccgagacccccctctgaggactgtcctcctgagcagacagaggagcagggagacgag
gagggaaactatgactgcaccttgtcctga
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