Scomber scombrus (Atlantic mackerel): 133995102
Help
Entry
133995102 CDS
T10651
Symbol
arpc1b
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04144
Endocytosis
ssco04517
IgSF CAM signaling
ssco04530
Tight junction
ssco04810
Regulation of actin cytoskeleton
ssco05100
Bacterial invasion of epithelial cells
ssco05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133995102 (arpc1b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133995102 (arpc1b)
09144 Cellular community - eukaryotes
04530 Tight junction
133995102 (arpc1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
133995102 (arpc1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
133995102 (arpc1b)
05100 Bacterial invasion of epithelial cells
133995102 (arpc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133995102 (arpc1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
133995102 (arpc1b)
Membrane trafficking [BR:
ssco04131
]
Others
Actin-binding proteins
Arp2/3 complex
133995102 (arpc1b)
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
133995102 (arpc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
ANAPC4_WD40
WDR55
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_Aladin
Beta-prop_WDR3_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
EIF3I
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
eIF2A
RMC1_N
WDR90_beta-prop_4th
PEP5_VPS11_N
Beta-prop_WDR90_POC16_2nd
Tricorn_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
133995102
NCBI-ProteinID:
XP_062290381
LinkDB
All DBs
Position
2:complement(27357121..27362721)
Genome browser
AA seq
380 aa
AA seq
DB search
MSYHSFLLEPISCHAWNKDRTQIALCPNNHEVHIFKKDGAKWNKIHELKEHNGQVTGIDW
APDSNRIVTCGADRNAYVWTLKEGAWKPTLVILRINRAARCVKWSPRENKFAVGSGSRLI
SICYFEQENDWWVCKHIKKPIRSTILSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVEEKP
GPTSWGSKMPFGEMLFESGGSGAESQASTGAGGWVHSVCFSHSGNRLAWTSHDSSLSVAE
GGKTSTVSSLSSETLPLLCVTFITENSLVAAGHDCYPMLFVYDGAKGSLTFGGKLDVPKQ
AAQKGISARERFQNLDRRASETQSTEKDLNTLHKNSISQISVLEGGRNQCAKFCTTGMDG
GLGVWDVKSLESAMKDLKIV
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtcataccatagcttcctgctggaaccaattagctgccatgcctggaacaaagatcga
acccagatcgcgctctgtcccaacaaccatgaggtccacatcttcaagaaagatggggcc
aagtggaacaagatccatgagctgaaggagcacaatgggcaggtgacaggtattgactgg
gctccagacagtaaccgtatagttacttgcggagcagaccgtaacgcctatgtgtggacc
ctaaaagagggtgcatggaaacccaccctggtcatcctcaggatcaaccgcgcagcacgc
tgtgtgaaatggtcgccacgagagaacaagtttgctgtaggcagcggctctcgcctcatc
tccatctgctactttgagcaggaaaatgactggtgggtgtgcaagcacatcaagaagcct
atccgctccaccatcctcagtctggactggcatcccaacaacgtcctgctggctgctgga
tcctgtgacttcaaatgcagggtgttttcagcctacataaaggaggtggaggagaagccc
ggccccacttcctggggcagcaagatgccgtttggagagatgttgtttgagtccggaggg
tccggagctgagagccaggcttcaacaggagcaggtggctgggtgcacagcgtgtgcttc
tcacactccggcaaccgcctggcctggacttcccatgactcctctctgtctgttgcagag
ggcggcaagaccagcacggtgagcagtctgagctctgagacacttcctctgctgtgtgtc
accttcattactgagaacagcttagtagccgctggccatgactgttacccaatgctgttt
gtgtacgacggtgccaaaggcagcttgacatttggtggcaagctggacgttcctaagcag
gcggcccagaagggcatcagtgccagggaacgtttccagaacttggaccgtcgtgcctca
gagacccagagcaccgagaaggacctgaacactctccacaagaacagcatcagccaaatc
tcggtgctggaggggggacgaaaccagtgcgccaagttctgcaccaccggcatggatgga
ggactgggcgtctgggatgtcaagtctctggagtctgctatgaaggacttgaagatagtc
tga
DBGET
integrated database retrieval system
