Scomber scombrus (Atlantic mackerel): 133995122
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Entry
133995122 CDS
T10651
Symbol
ap3b1a
Name
(RefSeq) AP-3 complex subunit beta-1 isoform X1
KO
K12397
AP-3 complex subunit beta
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
133995122 (ap3b1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133995122 (ap3b1a)
Membrane trafficking [BR:
ssco04131
]
Endosome - Lysosome transport
Others
AP-3 complex
133995122 (ap3b1a)
Endosome - Golgi transport
133995122 (ap3b1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3B1_C
AP3B1_C_2
Cnd1
HEAT_2
INTS1_R4
MOR2-PAG1_C
Motif
Other DBs
NCBI-GeneID:
133995122
NCBI-ProteinID:
XP_062290410
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Position
15:complement(6454837..6519373)
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AA seq
1105 aa
AA seq
DB search
MSTAALYNDQGGAEAAIEAGQESTPTTSGSSGAAFGLFSSDFKKNEDLKEMLESNKESLK
LEAMKRVVGLIAKGKNASELFPAIVKNVANKNIELKKLVYVYLVRYAEEQQDLALLSIST
FQRALKDPNQFIRASALRVLSSIRVPIIVPIMMLAIKEAAADMSPYVRKTSAHAIQKLYS
LDPDQKEQLIEVIEKLLKDKSTLVAGSVVMAFEEVCPDRIDLIHKNYRKLCNLLVDVEEW
GQVVIISMLTRYARTQFTSPWKEGAEFDENNDKTFYDSDSEEKSGQMDDKPYVMDPDHRL
LLRNTKPLLQSRNTAVVMSVAQLYWHLAPKHEVSIVTKSLVRLLRSHREVQYIVLQNIAT
MSIQRKGMFEPYMKSFYVRSTDASHIKTLKLEILTNLANEANISTILREFQTYVKSQDKA
FAASTIQAIGRCATNITEVTDTCLNGLVLLLSNRDETVVAESVVVIKKLLQTQPTQHSEI
IKHMAKLFDNITVPMARASILWLMGEYCERVPKIAPDVLRKMAKTFTAEEDIVKLQIVNL
AAKLYLTNSKQTKLLTQYILNLGKYDQNYDIRDRTRFIRQLIVPNEKNGALNKYARRILL
ASKPAPVLESAFKDRDRFQLGTLSHSLNIKASGYQELSDWPAVAPDQSVRNVEVIEPVKE
WAPLVGKSKKSKSDDKFYSDDEDEKEKEGSDSSGSEDSSSSSSSSGSDESGSDSEEEESS
EESEKSSGDSGKSSGESEKSSSGSDLDQKKKKKKTKKVPLKKSKPTAADSDSDENGNGPV
AQASSSSAESSSDSESDSEDDSDSDSPATQKKSAVKSKPKVQVKPKNEVSLLDLDDFSPA
NTNTPKSSVLSSSLMSDLEGLSLSNVSSAMQVTAPSFGPVKTYELLHHMTGKGLSAKYHF
PRQPCLYQPSMVAVQVILTNSSDHSLEEIHIGDRSPASLNIHCFNTIERLEPEASVTVSM
GIDFSDSTQAANFQLCTKEDQFSVSIQPAVGELLMPSTMTEQDFCKEQGKLLGMNETSAT
VTMATANASSQAISKQVLSVANVGEVSSSQNNFHRFAGRTVSSGALVLVSLELKESSTCL
LTIHTEKSVMASMLLRDLKQALAQA
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacggcagctttgtacaacgaccaaggaggagcagaggcagcgattgaagctggg
caggagagcacaccgaccacctccggcagctccggagcagcttttggactcttcagctcc
gactttaaaaagaatgaagaccttaaagagatgttggagagcaacaaggagtcgcttaaa
ctggaggccatgaaaagagttgttgggctaatcgccaaagggaaaaatgcatccgagctg
tttcccgccattgtgaagaacgtcgcgaataagaacattgagcttaagaagctcgtttat
gtgtacctggtgagatatgcagaggagcagcaggacctggctttactatccatcagcacc
ttccagcgggccctcaaggacccaaaccaattcatccgggccagcgcgctgagggtcctc
tccagtatccgtgtccccataatcgtccccatcatgatgctggccatcaaggaggctgca
gctgacatgtccccgtatgtcaggaagacgtctgcccacgctattcagaagctctacagc
cttgacccagaccagaaggagcaactgatcgaagtgattgagaaactgttgaaagacaaa
agcacactggtggccggcagcgtggtgatggccttcgaggaagtgtgtccggatcgcatt
gacctgatccacaagaactacagaaagctgtgcaacctgctggtggatgtggaggagtgg
gggcaggtggtcatcatctccatgttgacgcgttatgccaggacgcagttcaccagtcct
tggaaagagggcgctgagttcgatgagaacaacgacaagacgttctacgactccgactct
gaggagaaatcaggccagatggacgacaagccttacgtcatggatccagatcacagactg
ctgctcagaaacaccaaacctctactgcagagcaggaacactgctgtggtgatgtccgtc
gctcagctttactggcatctggccccaaaacatgaagtcagcatcgtcaccaagtcactg
gttcgactcctgaggagtcacagagaggtgcagtacattgtgcttcagaatatcgccacc
atgtccattcagaggaaggggatgtttgagccgtacatgaagagtttttatgtgagatct
acagatgcctctcatatcaaaacactgaagttggagatcctgacaaacctcgctaatgaa
gccaacatctccaccatcctgagagaatttcagacctatgtgaagagccaggacaaagcg
tttgcggcatccaccatccaggccatcggcaggtgtgccaccaacatcaccgaggtgacg
gacacctgtctcaacggtctggtgctgctgctttccaacagagacgagaccgtggtggca
gaaagcgtggtagtcatcaagaagttgcttcagacgcagccgacccagcacagcgagatc
attaaacacatggccaagctcttcgacaacatcactgttcccatggcccgagccagcatc
ctgtggctgatgggagagtactgcgagagggtgccaaagattgcacctgatgtactccgg
aagatggcgaagactttcacagcagaggaggacattgtcaagctgcagattgtcaaccta
gcagctaaactctacctgaccaactccaagcagaccaagctgctgacccagtacatcctt
aacctcggcaaatacgatcagaactacgacatcagagaccgcactcgcttcataagacag
ctgatcgtgccaaacgagaagaacggcgccctcaacaagtacgctcggcgcatcctgctg
gcctccaaaccagccccggtgctcgagtctgccttcaaagatagagatcgtttccaactg
ggcaccctctcccacagtctcaatatcaaagccagtggataccaggagctgtcggactgg
ccagctgttgctcctgaccagtctgtgaggaacgtggaagtcattgaaccagtgaaggag
tgggcaccgttggtcgggaagtccaagaaatccaaatctgatgacaagttctactcggac
gatgaagacgagaaagaaaaggaaggatcagacagcagcggcagtgaagacagcagcagc
agcagtagcagcagcggaagtgatgagtcgggcagtgacagcgaggaggaggagagcagt
gaagagtctgagaagagctccggtgattctgggaagagttcgggtgaatccgaaaagagc
tcgagcgggtccgacttagaccaaaagaaaaagaagaaaaagaccaagaaggtgcctctg
aagaaaagcaagccaactgctgctgacagtgactcagatgaaaatgggaacggacctgta
gcccaagccagcagttcatcagccgaaagctcctctgattcagagtcggactcggaggac
gactcggactcagactcccccgcaacacagaagaagagcgctgtcaagtccaaacccaag
gtgcaagtgaagcccaagaatgaagtctctttactggatctagatgacttttctccagca
aacacaaacacgccaaaatcttcggtcctctcttcgagcctgatgtccgacctggaaggc
ctctctctctccaacgtctcctccgccatgcaggtcaccgctccgtctttcggccctgtg
aaaacctatgagctgcttcaccacatgacgggaaaaggtctgtcagcgaagtatcatttc
cccagacagccgtgtctgtaccagcccagcatggtggccgtgcaggttatactgaccaac
agctcagaccacagcctggaagagatccatataggagaccggagcccagcgagcctcaac
atccactgctttaacactatcgagcggttggagccagaggcctcggtgacggtttccatg
ggtattgacttcagcgactcgacacaagcagctaacttccagttgtgcaccaaggaggac
cagttcagtgtgtccatccagcctgctgtgggagagctattaatgcccagcaccatgaca
gagcaggacttctgcaaggagcaaggtaagctcctgggcatgaatgagacctcggcaacc
gtcaccatggcaacagcgaacgcctccagccaggccatcagcaagcaggtcctgtctgtg
gccaacgtaggagaggtttcatccagccaaaacaacttccacaggtttgctggacggacg
gtcagcagcggagctctggtcctggtgtcgctggagctgaaggagtcctccacctgcctg
ctgaccatccacacagagaagagtgtgatggcgtccatgttgctccgagacctcaaacaa
gccctcgcacaggcatag
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integrated database retrieval system
