KEGG   Scomber scombrus (Atlantic mackerel): 133995126
Entry
133995126         CDS       T10651                                 
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-like
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco03082  ATP-dependent chromatin remodeling
ssco03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    133995126
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    133995126
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ssco01009]
    133995126
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ssco03021]
    133995126
   03036 Chromosome and associated proteins [BR:ssco03036]
    133995126
Protein phosphatases and associated proteins [BR:ssco01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     133995126
Transcription machinery [BR:ssco03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     133995126
    SWI/SNF complex
     133995126
Chromosome and associated proteins [BR:ssco03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    133995126
   PBAF complex
    133995126
   SWI/SNF complex
    133995126
SSDB
Motif
Pfam: SNF5 INI1_DNA-bd DUF1679
Other DBs
NCBI-GeneID: 133995126
NCBI-ProteinID: XP_062290416
LinkDB
Position
15:complement(27588606..27596551)
AA seq 368 aa
MQLALSKTFGQKPVKFQLEQDGDFYMVGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERK
KIVASSHATSVTLLKASECEEIFEGNDEKYKAVSISTEPPAYLREQKAKRSSQWVPTLPN
SSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENAAQVEALVPIRLDMEIDG
QKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLAFVPAIASAIRQQIESYPTDSILEEQ
ADQRVIIKLNIHVGNISLVDQFEWDMSERENSPESFALKLCSELGLGGEFVTTIAYSIRG
QLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNTRRMRR
LANTAPSW
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgcaattggctcttagtaaaacgtttggccagaagccagttaaatttcagttagaacaa
gatggggacttctacatggttgggtccgaggttggaaactatctgcgtatgttcagaggc
tctttgtataaaagatacccatctttatggaggaggctggcctcagtggaggagaggaag
aaaattgtagcgtcgtcacatgccaccagtgtcactctgctcaaagcatcagagtgtgaa
gagatcttcgagggtaacgatgagaaatacaaggcggtgtccatcagcacagagccccct
gcttacctccgggagcagaaagcaaagaggagcagtcagtgggtccccacgctgcccaac
agctcccaccatctagacgctgtgccgtgctccaccaccatcaaccgcaaccgcatggga
cgagacaagaaaaggaccttcccactgtgctttgatgaccatgaccctgcagtgatccat
gagaacgcagcccaggtagaggctctggttcccattcgtctagacatggagatagatgga
cagaagctgcgagatgccttcacatggaacatgaatgagaaactgatgactccagagatg
tttgcagagattctgtgtgatgacctggacctgaaccctctggccttcgtccccgccatc
gcctctgccatccgacagcagattgagtcctaccccactgacagcatactagaggagcag
gcagaccagagagtcatcatcaagctgaacatccacgtggggaacatctctctggtggat
cagtttgagtgggacatgtcagagagggagaactccccagagtcttttgctctgaagctc
tgctctgagctgggtctgggcggagagttcgtcaccaccattgcctacagcatccgaggt
cagctcagctggcaccagaggacctacgccttcagtgagaacccgctgcccacagtagag
atcgccatccgcaacacaggcgatgcagaccagtggtgccccctgctggagaccctcaca
gatgctgagatggagaagaagatccgagaccaagacaggaacacaaggcgtatgagacga
ctggccaacactgccccctcctggtag

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