KEGG   Scomber scombrus (Atlantic mackerel): 133995151
Entry
133995151         CDS       T10651                                 
Symbol
wdhd1
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
  KO
K11274  chromosome transmission fidelity protein 4
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ssco03036]
    133995151 (wdhd1)
Chromosome and associated proteins [BR:ssco03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Other sister chromatid cohesion factors
    133995151 (wdhd1)
SSDB
Motif
Pfam: WD40_WDHD1_1st Mcl1_mid Ctf4_C WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz HMG_WDHD1 Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st eIF2A HMG_box WDR90_beta-prop_4th Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_EML Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 133995151
NCBI-ProteinID: XP_062290487
LinkDB
Position
1:33213306..33236126
AA seq 1099 aa
MPSERKPMRYGHSEGHTEVCFDDTGKFIVTCGNDGDVRIWEGLDDDEPKFITVGEKAYSL
ALKNGKLVTASSNNTVQIHTFPDGDPDGILTRFTTNATHVTFNSSGSRVAAGSSDFMVKV
VEVSDSSQQKTLRGHEAPVLSVAFDPKDDFLASASCDGSVVVWNIEEQTQVVSWPLLQKA
NDITNAKSLCRLAWQPRTAKFLAVPVDTKVHLYERGSWDHVTTLSDDLLTQPINVVVWSP
CGQFLAASCIGGFMAVWDVNSKLCVERQKHEKGFTVCSLAWHPSGTQIAYTDTEGCLGLL
DGLSTSTSSTSSSSTKVAAKKPEKDYDDLFDDDDDDRLMDDGRSDTNSPLKRAVARDDED
DDDDDLMPATGRVRNRGAILDDENSLDTGSLRLGQGLYGDDDDAGSIIVPAAAPLVPLHP
VYEGPLPTPPQKAFQPGSTPAHLTHRFMMWNSVGIVRGYNDEQDNAIDVEFHDTAVHHAM
HLTNNLSHTIADISQEAVLLACPSTDELTSKLQCLHFSSWDTNKEWMVDLPKNEDARALC
LGQGWAAVATSTMMLRLFSIGGVQKEVFSLPGPVVCMAAHGEQLLIVYHRATGFDGEQAL
AVQLLQFGRRKRQTINGEPLPLSKKSYLSWLGFTAEGTPCYVDSDGVVRMLNRSLGNTWT
PVCNTRETCKSKSDHYWVVGLHENPQQLRCIPCKGSRYPPTLPRPAVAILPFKLPLCQTT
TEKGQMEEQFWRSSLFHNHFGFLSSSGYEIDEDGQTQMQKEQQELLMKMFALSCKLEREF
RCVELAEMMTQNVVTLAIRYASRSRRMALAQRLSEIALEKANQIQEEEEEEEQEVEPQYS
SVRRTPSGYGHSEDTGKRNSSRHHHQQEEEEEEVAEEEEGQQMETEETAETRKRLNPFAK
EAGSPVQPSPTPIAKGGRANPFKVAGAGKPSPAAGQPRVTNILDNMTASRKSAPLSGSAG
KSSKNPVLKPLAPRPKTKTQSTLLQMTSSKTSNNKKSQAKAEPAADQQKQPDVPPPASPD
NTENKRPKTGFQLWLDENRKSIVADQPDLQETDVIKEAMGRFRTLSAEERLTGADENSAK
KKKSLDPSSRLSAFAFNKN
NT seq 3300 nt   +upstreamnt  +downstreamnt
atgccctctgaaaggaagccgatgcgttacggacactcggagggacacaccgaggtctgc
ttcgatgacactggaaagttcatcgtaacctgcggaaatgatggagatgttcggatatgg
gaaggtctggatgatgacgagccaaagttcatcactgttggagaaaaggcttactctctg
gctctcaagaacgggaagcttgtaacggcgagctccaacaacaccgtgcagatccacacg
tttccagatggggatcccgacggcatcctgacccggttcaccaccaacgccacacacgtc
accttcaacagcagcggctcaagagttgctgccggctccagtgacttcatggttaaggtg
gtggaagtgtcggacagcagccagcagaaaacactcagaggtcatgaagcacctgtcctc
agtgtcgcttttgaccctaaagatgacttcctggcgtcggccagctgtgacggctccgtc
gtggtctggaatattgaggagcagactcaggtggtcagttggcctctgctgcagaaggcc
aatgacatcactaacgccaaatctctgtgtcgactggcctggcagcccaggacggcgaag
tttttagcagttcctgtggacactaaggtacacctgtatgagcgagggtcctgggatcat
gtgaccacgctgtccgatgatctgctgacacagccgatcaacgtggtggtctggtctcca
tgtgggcagttcctggcagccagctgcatcgggggttttatggcagtgtgggacgtgaac
agtaaactgtgtgtggaaagacagaaacatgagaagggcttcacggtgtgcagtctggcc
tggcacccgtcaggcactcagatcgcctacacagacacagagggctgcctgggcctgctg
gacggactcagcacctccacatccagcaccagctcctccagcaccaaggtggcggctaaa
aagccagaaaaagactacgacgacctgtttgacgatgatgacgacgacagactcatggac
gacggacggagcgacaccaactccccgcttaagagagctgtcgctagggacgacgaagat
gacgacgatgatgatctcatgcctgcaacagggcgggttaggaacagaggggcgatcctg
gatgatgagaactcgctcgacacgggctccctgaggctcggtcagggtttgtacggagat
gacgatgacgcaggtagcatcatagtaccagcagctgccccacttgtgcccttgcatccc
gtctatgagggacccctgccgacgccgccccagaaggcctttcagccgggctccacccct
gctcacctcactcaccgcttcatgatgtggaactcggtgggaatcgtgcgaggctacaac
gacgagcaggacaacgccatcgacgtggagtttcacgacacagccgtgcaccacgccatg
cacctcaccaacaacctgagtcacaccatcgctgatatttcccaggaggccgtgctgctg
gcctgccccagcacagatgagctcaccagtaagctgcagtgtcttcacttctcatcgtgg
gacaccaacaaggagtggatggtggacctgccgaagaacgaggatgcgagggcgttgtgt
ctgggtcaaggctgggcggccgtcgccaccagcacgatgatgctgagactcttctccatc
ggtggagtccagaaagaagtcttcagtctgccgggacccgtcgtctgcatggctgcacac
ggagagcagctgctcatagtctaccaccgggctacaggcttcgatggagaacaggctctc
gcagtccagctgctgcagtttggtcgaaggaagagacaaaccatcaacggtgaacccctc
ccactctctaaaaaatcctacctgtcctggctcggatttactgctgagggaaccccgtgc
tacgtggattcagacggagtggtgcggatgttgaaccgctccttgggaaacacgtggaca
ccagtgtgcaacaccagagagacctgcaagagcaaatcggaccactactgggtggtggga
ttgcacgagaaccctcagcagctcaggtgtatcccatgtaaaggctccaggtaccccccc
accctgcccagacctgcggtggccatcttgcccttcaagctgccgctgtgtcaaaccacc
acagagaaaggacagatggaggagcagttctggcgttcgtccctcttccacaaccacttc
ggcttcctgtcgtccagcggttacgagatagacgaggacggacagactcagatgcagaag
gagcagcaggagttgctcatgaagatgtttgcattgtcgtgtaagcttgagcgagagttc
cgctgcgtggagctggccgagatgatgacccaaaacgtggtgactctggccattcgatac
gcctccaggtccagacgcatggccctcgcccagcggctcagtgagattgccttggagaaa
gccaaccagatacaggaggaagaggaggaagaggagcaggaagtggagccacagtactcc
agcgtcaggcggactccatctgggtacggccacagtgaagacaccggaaaacgtaacagc
agcagacatcatcatcagcaggaggaagaggaggaagaggttgcagaggaagaggaagga
cagcagatggagacggaggagacggcagaaaccagaaaacgtctgaatccgtttgctaaa
gaagcgggatcgcctgtacagccgtccccgacacccattgctaaaggaggacgtgcaaat
cctttcaaggttgctggtgcagggaaaccttcacctgcagctggtcagcctcgagtgacg
aacatcctggacaacatgacggccagcaggaagtcggctccactcagcggctctgcaggg
aaatcgagcaaaaaccccgtcctcaaacccctggcccccagacccaaaacaaagactcag
tcgactctgcttcagatgacgagctccaagacgtccaataataagaagagtcaggcgaaa
gcagagccggccgcagatcagcagaagcagccggacgtcccgcctccagcatcaccagac
aacacagaaaacaagagaccgaagacgggcttccagctgtggttggatgagaacaggaag
agcatcgttgccgaccagcctgacctgcaggagacggacgtcatcaaggaagccatggga
cgcttcaggacgctgtcggcagaggagagactgactggagcagatgaaaatagcgcaaag
aagaaaaaatctttggatccttcctcgaggctttcagcgttcgcgtttaacaaaaactaa

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