Scomber scombrus (Atlantic mackerel): 133995162
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Entry
133995162 CDS
T10651
Symbol
pou5f3
Name
(RefSeq) POU domain, class 5, transcription factor 1
KO
K09367
POU domain transcription factor, class 5
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133995162 (pou5f3)
03021 Transcription machinery [BR:
ssco03021
]
133995162 (pou5f3)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
133995162 (pou5f3)
Transcription machinery [BR:
ssco03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
133995162 (pou5f3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
133995162
NCBI-ProteinID:
XP_062290461
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All DBs
Position
15:6069356..6071989
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AA seq
476 aa
AA seq
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MSERSQSPSSECQSRPYDFSRANHCAQVLSQESLCSAASFQLPHGMLPDPGLLYNKTAYS
GITPASAQNFFPFPPVSSDYRGSDLHAGEFGQPKHWYPFAAPEYTGQVPGVTAATQPINL
SPPIAETREQIKLPEIKTEKDTGDDYSTEIKVQQYPTPPASAAMPPGVFYSAAWNPSFWP
GITHITPPGSNNQNPSTSSASSPSMSPSPPSSGLPGNAFFSGNTTQGATGSQTQNPASST
RSSGSSSGGCSDSEEENLSTEELEQFAKELKHKRITLGFTQADVGLALGNLYGKMFSQTT
ICRFEALQLSFKNMCKLKPLLQRWLNEAETSENPQDMYKIERVFVDTRKRKRRTSLEGAV
RSALESYFVKCPKPNTQEITHISDDLGLERDVVRVWFCNRRQKGKRLALPLDEECDGQYY
EQSPSPLNMAPSPIPSQGYSASSYPVGHPTLYMPSLHRPDVLKQALHPGLVSHLTG
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagagatcgcagagcccttcttcagagtgccaaagtcggccttatgacttcagc
cgggccaatcattgcgcccaggttttgagtcaggagagtttatgcagcgctgcgtcattt
cagcttcctcacggcatgctgccagacccgggcctcctctacaacaaaaccgcttatagt
ggcatcacaccggcatctgcgcagaactttttcccgttcccacccgtctctagtgactac
aggggatccgacctacacgctggagagttcgggcaacccaagcactggtatcccttcgct
gcgcccgagtacaccggccaggtacccggtgtaacagcagccacccagcccattaacctg
agtccccccatcgccgagactcgggagcaaatcaaactgcccgaaataaagaccgagaag
gacacaggggatgattactccacagagataaaggtccagcagtatccaacaccgccggcc
tccgccgccatgccccctggagtcttctactccgccgcctggaacccatccttttggcct
gggatcacccatatcacaccacccggcagcaataatcaaaacccttcaacatcctccgca
tcttccccatctatgtccccctcaccaccaagcagcgggcttccagggaacgcgtttttc
agcgggaacacaactcagggtgccaccgggtctcagacgcagaacccggcctcctccaca
cggagcagcgggtcttccagcggagggtgtagcgactccgaggaggagaacctttccact
gaagagctggagcagtttgccaaggagctgaaacacaaacgcatcactttgggtttcact
caagctgatgttggccttgctctgggtaacctttatggtaaaatgttcagccagacaaca
atttgtcgctttgaagctctccagttgagctttaagaacatgtgcaagctgaagcccctt
ctccagagatggctgaatgaggcagagacgtcggaaaatccccaggatatgtacaagatt
gagcgagtatttgttgataccaggaagaggaagagaaggaccagcctggagggagcagtg
cgctctgctctggagtcctactttgtcaagtgtcccaagcccaacacccaggagattacg
cacatatcagatgacctgggactggagagagatgtggtacgtgtttggttctgcaaccgt
agacagaagggaaagcgcctggccttgcccctggatgaggagtgtgatggccagtattac
gagcagagtccttcaccattgaacatggctccctctcccattcccagtcagggctactct
gcctccagctaccctgtaggtcatcctaccctctacatgccttcgcttcatcggcctgac
gtcctgaagcaagccctgcaccctggactggttagccacctgactggatag
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