Scomber scombrus (Atlantic mackerel): 133995170
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Entry
133995170 CDS
T10651
Symbol
ddx56
Name
(RefSeq) probable ATP-dependent RNA helicase DDX56
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Enzymes [BR:
ssco01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
133995170 (ddx56)
Ribosome biogenesis [BR:
ssco03009
]
Eukaryotic type
Pre-60S particles
Helicases
133995170 (ddx56)
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NCBI-GeneID:
133995170
NCBI-ProteinID:
XP_062290468
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Position
15:15586089..15599866
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AA seq
566 aa
AA seq
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MAADRLMFHEMGLDDRLLKAVADLGWSQPTLIQEKAIPLALEGKDLLARARTGSGKTAAY
AVPVIQRILNSKQTVREQDVRALILVPTKELGQQVQTMIRQLTAYCLRDVRVADISSKAD
LSAQRPILMEKPDVVVGTPSRVLAHLNAQNLILHSSLETLVVDEADLLFSFGFEADLKNL
LCHLPKIYQSFLMSATLTEDVQALKELLLHNPVILKLQGSQLPDSNQLQQYSIKCEEEDK
FLLIYTLLKLRLVQGKTLVFVGAVDRCYRLKLFLEQFSIPACVLNSELPVHSRCHIITQF
NQGFYDYIIATDEQSLADPTAAPPTPTTAGKGKKKKKTGEKGGKGKDKEYGVSRGVDFQN
VANVINFDFPTTFESYIHRVGRTARADNPGTALSFISHTELDLLSEVEEALTGENAVSAL
KPYEFKMEEIEGFRYRCRDAMRSVTKQSVREARLKEIKQELLNSEKLKTYFEDNPRDLQL
LRHDKDLHPAVVKPHLKNVPEYLIPETLKGTVNPLLSRRRKKRKDKLKSEGGVVKPSFKK
NIQGKNPLKSFRYTGGRNRKGKTGQL
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggacaggctgatgttccatgagatgggattagatgaccgtctgttaaaggcg
gtggcagatctgggttggtcccagccgactctgatccaggagaaggcgatcccgttggct
ctggaggggaaagacctgctggctcgagctcggaccggatccggaaagacggcagcgtac
gccgttcctgttatacagagaatcctgaactccaaacagactgttcgggagcaggatgtg
agagctctgatcctggttccaaccaaagagttgggtcagcaggtccagaccatgatccga
cagctgacagcttactgcttgagagatgtccgagtggccgacatctccagcaaagctgac
ctgtcggctcagaggccgatcttaatggagaagcctgacgtggtcgttgggacgccgtct
cgtgtgcttgctcacctcaacgcccagaacctgatcctgcattcgtccctggagacgcta
gtggtggacgaggccgacctgctgttctcttttggcttcgaggcagatctgaagaacctg
ttgtgccatttgcctaaaatctaccagtcgttcttgatgtcggctactctcaccgaggac
gttcaggccttaaaggagctgctgctgcacaaccctgtgatcctgaagctgcagggctcc
cagctgcccgacagcaaccagctgcagcagtacagcatcaaatgtgaagaggaggacaag
tttctgctcatctacacgctgctgaagctgcggctggttcaggggaagacgctcgtgttc
gtgggagccgtggacagatgttacagactgaaactgttcctggagcagttcagtatccct
gcatgtgtgctcaactctgagctgcctgttcactccaggtgtcacatcatcacacagttc
aatcagggcttttacgactacatcatcgccacagacgagcagagtttggccgacccgacc
gccgctcctccgactccgacgaccgcgggaaaagggaagaagaaaaagaagacgggcgag
aaaggaggaaaggggaaggataaagagtacggcgtctccagaggtgtggacttccaaaac
gttgccaacgtcatcaactttgatttccccacaactttcgagtcttacattcatcgagtt
ggacggacggcgagagcagacaaccccggcactgctctgtcctttatctctcacactgag
ctcgatctgctgtcggaggtggaggaggcgctcacaggagaaaatgctgtttctgctctg
aaaccttacgagtttaagatggaggagattgaaggtttcaggtacaggtgcagggatgcg
atgcgttcagttaccaaacagtcggtgagggaggccagactgaaggaaatcaaacaggag
ctgctaaactcagagaaactcaagacatattttgaggataaccccagagatctgcagctg
ctcagacacgacaaagatctccatcctgccgtcgtcaaacctcacctgaagaacgttccc
gagtacctcattcctgagacactgaaggggacggtgaatcctctgttaagcaggaggagg
aaaaagaggaaagacaagctgaaatcagaaggaggagttgttaagccgagtttcaagaag
aacattcaggggaagaacccactgaagagtttccgttacaccggaggaagaaacagaaaa
ggcaaaaccggccagttgtag
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