Scomber scombrus (Atlantic mackerel): 133995221
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Entry
133995221 CDS
T10651
Symbol
kcmf1
Name
(RefSeq) E3 ubiquitin-protein ligase KCMF1
KO
K22376
E3 ubiquitin-protein ligase KCMF1 [EC:
2.3.2.27
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
133995221 (kcmf1)
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133995221 (kcmf1)
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133995221 (kcmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Di19
ZZ
Di19_C
TFIIA
zf-C2H2
Zn_SUZ12
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
133995221
NCBI-ProteinID:
XP_062290535
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All DBs
Position
15:complement(10843938..10852890)
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AA seq
389 aa
AA seq
DB search
MSRHEGVSCDACLKGNFRGRRFKCLICYDYDLCASCYESGATTTRHTTEHPMQCILTRVD
YDLYYGGDTFSVEQPQSFTCPYCGKMGYTETSLQEHVTSEHAETSTEVICPICAALPGGD
PNHVTDDFTAHLTLEHRAPRDLDESSSVRHVRRMFHPGRGLGGPRARRTNMHFTSGSTGG
LSSSSSQSSTYTPSNREAMDPIAELLSQLSGVRRAAGGQINSSGPSASQLQQLQMQLQLE
RQQAQAARQQVETGRHATRRSNNPGNTGNTIPPPSTATANSATVGESNPSSSSHSSQFLL
ARLNEPKMSEAERQFLEGERADRSLFVQELLLSTLMHEESSSSDEDERRDFADFGAMGCV
DIMPLDVALENLQLRESRSTGKEPPPPPL
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgacatgagggtgtgagctgtgatgcgtgtttaaaagggaactttagaggaaga
cggttcaagtgtttaatttgctacgactacgacctgtgcgcatcgtgctacgagagcgga
gccacaacaacgagacacaccacagagcaccccatgcagtgtatattaaccagggtagac
tatgacttgtattatggaggagacactttttcagtagagcaaccccagtcattcacatgt
ccttattgtgggaaaatgggctacacagagacgtccctacaggagcacgtcacttcggag
catgcagagacttccacagaggtgatctgtccaatatgtgctgccttgccaggcggcgac
cccaaccacgtcacagatgactttacagctcacctcacacttgaacacagagcaccaaga
gatttagatgagtccagcagtgttcggcatgtacgcaggatgttccaccctggacgagga
ctgggcggccctagagcacggcggacaaatatgcactttactagcggctctacaggggga
ctttcatcctcctcatcacaaagctccacttacacccccagtaacagagaagcaatggac
cccattgcagagttgttgtctcagctgtcaggtgtacggcgtgcagcaggggggcaaata
aactcatcagggccttcagcctcccagctccagcagctccagatgcaactgcagttggag
cggcagcaggctcaagcagcacgacagcaagtggagacgggccgccatgccacacgacgc
agcaacaacccaggcaacactggcaacaccatccctccacccagcacagccactgccaac
tctgccaccgtgggtgaaagcaatccctcgtcctcgtcccacagctcccagttcctatta
gcacggttgaatgaacctaagatgtccgaagcagagcggcagtttctagaaggagagcgc
gcagaccgcagcctgttcgtccaggagctgctcctgtctacgctgatgcacgaagagagt
tcttcctccgacgaggacgaacgccgagacttcgccgacttcggagccatgggctgtgtg
gatatcatgcctttagatgtggcgctggagaacctccagctcagagagagccgctctacg
gggaaggagcctccgccgcctcctctttga
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integrated database retrieval system
