Scomber scombrus (Atlantic mackerel): 133995224
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Entry
133995224 CDS
T10651
Symbol
slc27a4
Name
(RefSeq) long-chain fatty acid transport protein 4
KO
K08745
solute carrier family 27 (fatty acid transporter), member 1/4 [EC:6.2.1.-]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03320
PPAR signaling pathway
ssco04382
Cornified envelope formation
Brite
Lipid biosynthesis proteins [BR:
ssco01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
133995224 (slc27a4)
Transporters [BR:
ssco02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
133995224 (slc27a4)
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
133995224
NCBI-ProteinID:
XP_062290539
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Position
15:5873802..5888709
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AA seq
643 aa
AA seq
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MLRLSCCTALLFVLRLLVGLPWYQVLPAILIFYLGSGGWSFLQIFAKTIGRDLHAAYVLL
RVKMNVRRHLKEKNTIPKIFAETVRRHGDKTALIFEGTGEKWTFHELDEYSNRVANLLLQ
RGFKEGDVVALFMENRSQYVGLWLGMAKIGVEAALINFNLRLEALVHCVTISNAKAVVFG
SELTDAVSEVHSSMGKAVQMFCSGDWDSKRVPQGTECLEPLLAASQTHLPSRPQSCFTDR
LFYIYTSGTTGMPKAAIVVHSRYYRMAALVYYGFRMTSDDVLYDCLPLYHSAGNVVGVGQ
CLIHGMTVVIRKKFSASRFWDDCVKYNCTIVQYIGEICRYLLNQPIRDTERQHPVRMALG
NGLRQSIWEEFMNRFNIPQIAEFYGATECNCSLGNFDNKVGACGFNSQILPYIYPIRLVR
VDEETMELIRGPDGVCIPCKPGEPGQLVGRIIQNDPLRRFDGYVNQTATSKKIAQSVFKK
GDTAYLSGDVLVMDECGHMFFKDRTGDTFRWKGENVSTTEVEGTLSRLLDMKDVVVYGVE
VPGAEGKAGMAAIADPSHSTDLEKFVKDMDKALPPYARPVFLRFLPEVNKTGTFKFQKTD
LRRDGFDPTVVSDRLYFLDSSRARYVQVDEENYRSILSGKHKL
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtctatcgtgttgcactgccctgctgtttgtgttgaggctgctggtgggcttg
ccttggtaccaggttctcccggccatcctgatcttctacctgggtagcggaggatggagc
ttcttacagatttttgccaaaacaattggcagagacttacatgcggcgtatgtattattg
cgggtaaagatgaatgtcagacgccacctcaaagagaagaacactattccgaagatcttc
gctgaaacagtccgccgtcatggggacaaaacagcactgatcttcgaagggactggtgag
aagtggaccttccatgagttagacgaatactccaacagagtggctaacctgctgcttcag
cgaggtttcaaggagggtgatgtggtagcccttttcatggagaaccggtcccagtatgtg
ggcctctggctgggcatggccaagattggagtagaggctgctctcatcaacttcaatttg
agactagaggccttggttcactgtgtcaccatctccaatgccaaggctgtggtgttcggg
tcagagctgactgatgcggtgtccgaggtccacagctcaatgggaaaggcagtgcagatg
ttttgctctggagactgggactccaaacgtgtcccacagggaaccgagtgcctagagccc
ctgctggctgcctcccagactcacctgccaagccggccgcaaagctgcttcacagatcgc
ctgttctacatctacacatcaggaaccactgggatgccgaaagctgctattgttgtgcac
agcaggtactaccgcatggcagctttggtgtattatggcttcaggatgacatcagatgac
gtgttgtatgattgccttccactctaccactctgcaggtaatgttgtgggagtgggccag
tgtttaatacacggcatgactgtagtcatcagaaagaagttctctgcctcgcgtttctgg
gacgactgtgtcaaatacaactgcactattgtacagtacataggtgagatctgccggtac
ttgctgaaccagccaattcgagacacggagaggcagcatccggtgcgcatggcactgggc
aacggcctgcgtcagtccatatgggaggagttcatgaaccgcttcaatatcccacagatc
gcagagttctacggagccacagagtgcaactgcagcctgggcaacttcgataacaaggtt
ggagcgtgtggcttcaacagtcagattctaccctacatctaccccatcagactggtgagg
gtggatgaagagaccatggagctcattagaggacctgatggcgtctgcattccctgcaaa
cctggcgagcctggccagctagtcggcaggatcattcagaatgacccccttcggaggttt
gacggctatgtcaaccaaacagcgaccagcaagaagattgctcaaagtgtctttaagaag
ggagacactgcctatctctctggtgacgtgctggtcatggatgaatgtggtcacatgttt
ttcaaggaccgaacaggagacactttccgctggaaaggagagaatgtctcaaccactgag
gtggaggggactctcagcaggctgctagacatgaaagatgtagttgtatacggagtagaa
gtaccaggagcggagggaaaagctggaatggcagctatcgctgatccatctcactccact
gacctggagaagtttgtgaaggacatggacaaggctctccctccgtatgccagacctgtc
ttcctccgtttcctgccagaggttaataagacaggaaccttcaagtttcagaagacggac
ttgcgtcgggacggctttgacccaactgtggtgtcagatagactgtacttcctggattcc
agcagagcacgctacgtgcaggtggacgaggagaattaccgctccatactgtcagggaag
cacaaattgtga
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