Scomber scombrus (Atlantic mackerel): 133995267
Help
Entry
133995267 CDS
T10651
Symbol
cldn5b
Name
(RefSeq) claudin-5b
KO
K06087
claudin
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03272
Virion - Hepatitis viruses
ssco04382
Cornified envelope formation
ssco04514
Cell adhesion molecule (CAM) interaction
ssco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
133995267 (cldn5b)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
133995267 (cldn5b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
133995267 (cldn5b)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133995267 (cldn5b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssco03037
]
133995267 (cldn5b)
04147 Exosome [BR:
ssco04147
]
133995267 (cldn5b)
Cilium and associated proteins [BR:
ssco03037
]
Other cilia and associated proteins
Stereociliary proteins
133995267 (cldn5b)
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
133995267 (cldn5b)
Exosomal proteins of colorectal cancer cells
133995267 (cldn5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
MFS_MOT1
DUF1129
S1FA
Motif
Other DBs
NCBI-GeneID:
133995267
NCBI-ProteinID:
XP_062290588
LinkDB
All DBs
Position
15:complement(16220853..16222291)
Genome browser
AA seq
215 aa
AA seq
DB search
MLAACLEFLGLALCVTGSLLVMVACGLPMWKVTAFIDSNIVVAQTIWDGLWMSCVVQSTG
QMQCKIHDSVLALTQDLQTARALTIVSAVLGVVALTVTVAGAQCTNCIKEESVKAKVVNA
GGVLYIVSGLFVLVPLCWMANNIIVDFHNPNLPPSKKREIGAAIYIGWAATALLLLGGTL
LCCSFSPGVRGTYPIKYAPTKTITSNGEFDKKHYV
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgcttgctgcgtgtctggagttcctcggcttggcgctgtgcgtcaccggctcgctgctg
gtgatggtggcctgcgggcttcccatgtggaaggtgaccgccttcatcgactccaacatc
gtggtggctcagaccatctgggacggtctgtggatgtcctgcgtggttcagagcacgggc
cagatgcagtgcaagatccacgactcggtgctggcccttacgcaggacctgcagacggct
cgcgccctcaccatcgtctccgccgtgctcggggtcgtcgcgctcactgtgaccgtcgcc
ggggcgcagtgcaccaactgcatcaaggaggagtcggtgaaggctaaggtggtgaacgca
ggaggggtgctgtacatcgtgagcgggctgttcgtgctggtcccgctctgctggatggcc
aacaacatcatcgtggacttccacaacccgaacctgcctccgtccaagaagagagagatc
ggtgcagcaatctacatcggctgggcggccactgcgctgctgctgctcggcgggaccctg
ctgtgctgctccttctctccgggggtgagaggcacctatcccatcaaatacgccccaacc
aagacgatcacatccaacggagagtttgacaagaagcattatgtataa
DBGET
integrated database retrieval system
