Scomber scombrus (Atlantic mackerel): 133995281
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Entry
133995281 CDS
T10651
Symbol
wdr41
Name
(RefSeq) WD repeat-containing protein 41
KO
K23610
WD repeat-containing protein 41
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
133995281 (wdr41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133995281 (wdr41)
Membrane trafficking [BR:
ssco04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
133995281 (wdr41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_TEP1_2nd
WD40_Prp19
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_DCAF12
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
133995281
NCBI-ProteinID:
XP_062290603
LinkDB
All DBs
Position
15:complement(6351221..6361723)
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AA seq
448 aa
AA seq
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MLRWILGGREAQGSVEKSSVLCIGEEQPKNWFTELQVLKGHFDIVRFLVQIDDFRCASAG
DDGLVLVWNVETGERLQELRGHSQQITAITTFTCSNGLMSHTSLITASSDRSLSLWDPDT
GNRVQTISDLQSSVKCLLVLERLCVWVSGGEELCVWNKDFQLQCHKQNHSDTGITALIEL
PKNCIAAAMDKEIVIYRLTVSTDSSMSVAEIRCLSDHQDQIRALINVNDGLFASGSHMGE
LILWDAIDWNILAYEHILWEESQAQAEIRMGAPKPSEMSIQHLTTNGKLILAAVGSGLYV
YSVLTKTVVAYRKVAHDSNILHTMLLSDSELMSCSEDGSVRMWEIQDLPLPAEPATPGFF
GMWSFGRSSKQAGPPLKKIIDVPNIRTLELTGDLIGHSGAVQMFVSFNENGLVTCSTDHL
LILWKNGERQSHLRSLVLFQKLEENGGL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggtggatccttggtggacgggaggctcaaggctcagtggagaaaagctctgtg
ttgtgcattggagaggaacagcccaaaaactggttcactgagctgcaggtgctgaaagga
cattttgacattgttcgatttctggtgcagattgatgacttcagatgtgcctcagcgggg
gatgatggccttgtgttggtgtggaacgttgagactggcgagaggctgcaggagctgagg
ggccattcccagcaaataacagccataacaaccttcacttgtagtaatggactcatgtcg
cacacttcgctcatcaccgcctcctcagaccgaagtctaagtttgtgggatcctgataca
ggaaacagggttcagactatttcagatcttcagtcgtctgtaaagtgtttgctggtgctg
gagcggctgtgtgtgtgggtctccggtggggaggaactgtgcgtgtggaacaaagatttt
cagctgcagtgtcacaagcagaaccacagcgacaccggaattactgccttgatagagctg
cccaagaactgtatagcagcagcgatggataaagagatcgtgatctacaggctgacggtc
tccactgattcctctatgtcagtggctgagatccgctgtctgtccgaccaccaggatcag
attcgagctcttatcaacgtcaatgacgggctcttcgccagcggttcccacatgggcgag
ttgattctgtgggatgcgatcgattggaacatcctggcctatgagcacatcctgtgggag
gagtctcaggcccaagctgaaatacgaatgggcgctcccaaacccagcgagatgtccatt
cagcatctgaccaccaacggaaagctcatcctggcagctgtgggcagcggtctgtacgtg
tacagtgtcctgacgaagacagtggtggcgtacaggaaggtcgcccatgactccaacatc
ttacacaccatgctgttatctgacagtgagctgatgtcctgctctgaggacggcagcgtg
aggatgtgggagatacaagacctgcctttacctgctgaaccagccactccagggttcttt
gggatgtggagttttggtcgctcaagtaaacaggctggacctccgttaaagaagatcata
gacgtcccaaacatccggacgctggagctgacgggcgacttgatcggtcactcaggagca
gtccagatgtttgtcagcttcaacgagaacgggctggtgacgtgttcgacggatcacctg
ctgatcctgtggaagaacggagagaggcagtctcacctgcgcagcctggtgcttttccaa
aaactggaagagaacggaggactttga
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