Scomber scombrus (Atlantic mackerel): 133995295
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Entry
133995295 CDS
T10651
Symbol
rnf170
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170 isoform X1
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ssco04121
]
133995295 (rnf170)
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133995295 (rnf170)
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133995295 (rnf170)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_4
zf-RING_2
RING_XB3-XBAT31
zf-RING_5
zf-C3HC4_2
TRAF3_RING
zf-Nse
zf-RING_10
DUF4599
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
133995295
NCBI-ProteinID:
XP_062290620
LinkDB
All DBs
Position
15:complement(22576193..22581326)
Genome browser
AA seq
268 aa
AA seq
DB search
MEDNQCGDLDYLIQDEDTLIEGISNQVLFVVVLSIAFLAGLLTLLCRQDEQNIHPENQEH
VRAVRQQLQTEQDENPQPEARQQYYTDMSCPVCLQQAVLPVETNCGHLFCGSCIIAYWRY
GTWLGAINCPICRQMVTLLFPLFHENAGPQRVQDGEAEPVLILRDINDYNRRFSGQPRSY
MDRLRDVPTLLRHAFREMFSVGGLFWMFRIRILLCLVGAITYLASPLDIIPEALFGLLGF
MDDFFVILLLFVYISIMYREVVTQRLNG
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaatcagtgtggggacttggactacctcatccaagatgaggacactctcatt
gagggtatcagcaaccaggtcttatttgttgtggtgctcagtattgccttcctcgcaggc
ctccttactctgctctgccgacaagacgagcagaacattcatcctgagaatcaggagcat
gttcgagctgtcagacaacaactacaaacagagcaggatgaaaatcctcagccggaggcc
aggcagcagtattacacagacatgtcctgccccgtgtgtttacagcaggctgttctgcct
gtggagaccaactgtggacatcttttctgcggttcctgtatcatagcctactggaggtat
ggcacctggctgggtgctattaactgccccatctgcagacaaatggtaacattgctcttc
ccactatttcatgagaatgctgggcctcagagggtccaagatggtgaggcagaacctgtg
cttattttaagagacatcaacgattacaaccgcaggttctcaggccaaccaagatcttat
atggacaggctgcgagatgtgcccaccctactccgtcatgcctttagagagatgttctct
gtaggtggcctcttctggatgttcaggatccgaattctcctctgcctggttggcgcgatc
acatacctggcatcgccacttgatatcatccctgaggcacttttcggtctcctgggattc
atggatgatttctttgtaatccttctcctctttgtgtacatctcaatcatgtacagagag
gtggtcacacagagactaaacggctag
DBGET
integrated database retrieval system
