Scomber scombrus (Atlantic mackerel): 133995325
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Entry
133995325 CDS
T10651
Symbol
lhx3
Name
(RefSeq) LIM/homeobox protein Lhx3 isoform X1
KO
K09374
LIM homeobox protein 3/4
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133995325 (lhx3)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
133995325 (lhx3)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Furin-like_2
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
133995325
NCBI-ProteinID:
XP_062290656
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Position
15:complement(12753602..12764205)
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AA seq
409 aa
AA seq
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MDGHGERNSLKEAPNNTEMLLALLSHSDELRKEIPVCAGCNQHIVDRFILKVLDRHWHSK
CLKCSDCQAQLADKCFSRGDSVYCKDDFFKRFGTKCAACQQGIPPTQVVRRAQDFVYHLH
CFACIVCKRQLATGDEYYLMEDSRLVCKADYETAKQREADSTAKRPRTTITAKQLETLKN
AYNNSPKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDAGRQRWGQYFRNMKRS
RGSSKSDKDSIQEEGMDSDAEVSFTDEPPMSELSHTNGIYSSLSESSPAMGGRQGGNNHG
SFPLEHGILPSQDQFHDIRSNSPYGLPQSPGPLQALPRHQPLITSLVYPDSGLSIMTQGS
VPGINPAVRVSMGAANGPSSDLSTGSSGGYPDFPASPASWLDEVDHGQF
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggatggacatggtgagcgcaactctctaaaagaggcaccaaataacacggagatgcta
cttgctttgctgtcgcacagtgacgaactacggaaagagatcccagtatgtgcaggctgc
aatcaacacatcgtagaccgctttatcctcaaagtgctggatcgccactggcacagcaag
tgcctgaaatgcagcgactgccaggcacagctggcggacaagtgcttcagcaggggagac
agcgtctactgcaaagacgatttcttcaagagattcgggaccaaatgcgcagcctgtcag
caggggataccgcccacacaggtggtgaggagagcgcaggactttgtctaccacctgcat
tgttttgcctgcatcgtgtgcaagaggcagctggccacaggtgacgagtactacctgatg
gaggacagcaggctggtctgcaaggccgactacgagacagccaaacaaagagaagcagat
tcgaccgcaaaaaggccacgaacaaccatcacggctaaacaactggaaacactgaagaac
gcttacaataactctcccaaacctgcccgccacgttcgggagcagctatcatcagagaca
ggcctggatatgcgggttgtgcaggtttggtttcagaacagacgagctaaggagaaaagg
ctgaagaaagacgccgggcggcagaggtgggggcaatactttcgcaacatgaagaggtcg
cggggaagctccaaatcagacaaggacagtatccaggaagagggaatggacagcgacgcc
gaggtgtcttttacagatgagccaccgatgtcagagctcagccacaccaacggcatttac
agcagcctgagtgagtcctctccagccatgggtggccgccaaggtggcaacaaccacggc
tccttccccctggagcacggcatcctcccctctcaagaccagttccacgacatccgctcc
aacagcccctacggccttccgcagtcgccggggccactgcaggcactacccagacaccag
cctctaatcaccagcctggtctaccctgactcaggcctttctatcatgacccagggcagc
gtacccgggatcaaccctgccgtgagggtctccatgggggcagccaacggcccaagctcg
gacctctccactggaagcagtggaggatacccagacttccctgccagtcctgcctcctgg
ttggacgaagtagaccacgggcagttttga
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