KEGG   Scomber scombrus (Atlantic mackerel): 133995437
Entry
133995437         CDS       T10651                                 
Symbol
pus1
Name
(RefSeq) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Brite
Enzymes [BR:ssco01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     133995437 (pus1)
Transfer RNA biogenesis [BR:ssco03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    133995437 (pus1)
 Prokaryotic type
    133995437 (pus1)
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-GeneID: 133995437
NCBI-ProteinID: XP_062290811
LinkDB
Position
15:complement(22940909..22943402)
AA seq 421 aa
MFKIRPLLSALVNHRVTSERNGGLYKLFCMMSEGSKDEQTAKLLKRANEENESSAEKEHT
TKRIKTEGEHAEDERKYPKKKVVLLLAYCGKGYYGMQRNPGTSQFRTIEDELVTALVKSG
CIPENHGDDMKKMSFQRCARTDKGVSAAGQAVSLKVRLIEDIVEKINEHLPQQVRVLGLK
RVTQGFNSKNNCDARTYSYMLPTVAFSPKDYDTGNISAFRLEPETLQKVNRVFSLYKGTH
NFHNFTSQKAPTDPSARRYITEMSCGEPFIRSNTEFAVITVRGQSFMLHQIRKMIGLVIA
VTKGYVTEEVIERSWGQEKVDVPKAPGLGLVLEKVHFDRYNKRFGGDGLHEVLDWDKEEE
KIKAFKEAQIYPTIVETECQEGSMVSWMSTLPIHDFQATATRTQDDKDQKQDNADVGNDS
D
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgtttaaaatccgaccactgttgagtgccttagtaaaccacagagtgacatcagagaga
aacggtggactttataagttattttgcatgatgagtgaagggtccaaagatgagcagaca
gccaagctgctgaaaagagccaatgaggaaaatgaaagctctgctgagaaggaacacacc
acgaaaagaataaaaacagaaggggaacacgctgaggatgaaaggaaatatcccaagaag
aaagtagtcctccttttggcatactgtggaaagggatactatggcatgcagagaaatcct
ggcacctctcagtttaggaccattgaggatgaactggtcactgcacttgttaaatcgggt
tgcattcctgaaaaccatggagatgacatgaagaagatgtctttccaaagatgtgccaga
acagacaagggtgtgtctgcagctggtcaagcggtgtctctaaaggtgcgcttgattgaa
gacatcgttgaaaaaatcaacgagcatctgccacagcaggtcagggtgctaggtctgaaa
cgagtgacccaaggtttcaattctaagaacaactgtgacgctcgtacatactcctacatg
cttccaaccgtggccttttccccgaaagactatgatacagggaatatatcagcctttcgc
ctggagccagagacccttcaaaaggtcaaccgtgtgttctctctctacaaaggcactcat
aacttccacaacttcacctctcagaaggctccgactgaccccagtgcccgccgctacatc
acagagatgtcctgtggagagccttttatccgcagcaatactgagtttgcggtgatcact
gtgcgaggtcagagcttcatgctgcaccagatccgcaagatgattggtctggtgattgcg
gtgaccaagggctacgtgacggaggaagtgatcgagcgcagctggggacaagaaaaggtg
gatgtgcccaaagctccgggacttgggttggtcctggaaaaggttcactttgacaggtat
aacaaacgatttggaggggacgggctacatgaggtcctggattgggacaaagaagaggag
aagatcaaggcctttaaggaggctcaaatttaccccaccattgttgagaccgagtgtcag
gagggctctatggtcagctggatgtccacactcccaatccatgactttcaagcaacagct
actagaacacaagatgataaggaccagaaacaggacaatgcagatgtaggaaatgactct
gattag

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