Scomber scombrus (Atlantic mackerel): 133995513
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Entry
133995513 CDS
T10651
Symbol
itga1
Name
(RefSeq) integrin alpha-1
KO
K06480
integrin alpha 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04510
Focal adhesion
ssco04512
ECM-receptor interaction
ssco04810
Regulation of actin cytoskeleton
ssco04820
Cytoskeleton in muscle cells
Brite
Exosome [BR:
ssco04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133995513 (itga1)
Cell adhesion molecules [BR:
ssco04515
]
Integrins
Integrin alpha subunits
133995513 (itga1)
CD molecules [BR:
ssco04090
]
Proteins
133995513 (itga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133995513
NCBI-ProteinID:
XP_062290917
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Position
15:complement(10857351..10906293)
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AA seq
1190 aa
AA seq
DB search
MLETSQHFSLITATVAGLLVCVLSFNVDQKNGLSFSGPLEDMFGYTVQQFENSEGKWVLI
GSPLSGQPAKRTGDVYKCPVGRGNNECIKLELPENTTVPNLREVKENMTMGTTLVTNPNG
GFLACGPQYGYMCGQQQFISGVCANVSSSFQILNSMAPAVQECAKALDIVIVLDGSNSIY
PWTSIIDFLLRFIAKFDVGPKLTQVGIVSYGLDVTHRVNLSQFDNTANLLKFVEELPQQT
GFKTMTFLGIDTARKEAFIPERGARPGVKKVMVVVTDGESHDSHNLDQVISDCQNDGIER
FGIAVLGDYNRQNKSEEEVKKFIKEIESISSSPLRDHFFNVSDEVALLTIVDALGSKIYA
LEATSGNSTSSFEMEMSQAGFSAHASKDGVLLGAVGAYDWNGTVVMQSAGENETVIPERN
AFFDSKTEAGYERLAGYLGYDVESASSPNGVLYITGAPRYNHTGRVVIYRLDKKNKIVVS
QILLGEQIGSYFGSVLQTVDVDNDSYTDLLLVGAPMYMGSERNEQGQVYVYKLNQGGQFQ
HQFTLKPINQSCCTAHSENCTNKNEPCGARFGTAIAAVTDLNLDGFNDVAIGAPFENDHR
GAVYIYHGDKKSLKEKYVQRIPAGGDGEKVKFFGQSIHGVMDLNGDGITDVTIGGLGGAS
LFWSRDVAELHVNMTFDPAKINLQQSQHQCERGGRISVCVTTEICFMYRIKSDQQYSNAN
AEIQYNLTLDGLRAKARASFLSSDDKSDRKITRRVNVTDRAKEPSCVKEIFMMSSRLDFR
DPLMVSLKFGLVNEDKGPVLDESLPSSINKTIPLMECGSDERCIADLSLKAESSVKKMVI
KANKEKIDVNIRVKNSKDNAYNTKVIVSFTPNINYVTVEPKKYVTLNHTRVEFAVGYPFL
ASNVEEIFKVKFEVNPTHIQEDIQINVTATSDSEELPSTLHDNTVQIAIPVTYEAGLIFT
VRPVDKHIEIQDREQYPSVFNDTTMIGEEISISYTVEKTGDIVTPPLDLRVTYPRISPFQ
NNLLYLTHVTTSPQVKCDATHLINPHNINPDIIKPKPKKETLGVFILSCEKLDCASFTCS
IPEDKINQVNVTFRVWEPTFIEAEFSSLYMLVNATLGTKDTKLFVLSKSDSSRTVKIQVS
KATLGGIPIWIIIVSILIGLLILALVIFVLWKMGFFKRKSRDYSKEEVMD
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgctcgagacaagtcaacatttcagtctgataacagcgacagttgctgggctgctggtg
tgcgtattgtccttcaatgtggaccagaagaatggattgtcattcagcggcccgctggag
gacatgttcggctacactgtccagcagtttgagaacagcgaaggaaagtgggttctgatt
ggatcaccgctttcgggtcagcctgctaaacggacaggagatgtctacaagtgtcctgtg
gggagggggaacaacgaatgtatcaaactggagctgccagaaaacacaacagttcccaac
ttacgtgaagtcaaggagaacatgaccatgggaaccacacttgtgaccaatcccaatgga
ggatttctggcgtgtggtcctcagtacggctacatgtgcgggcagcagcagttcatctca
ggcgtctgtgcaaacgtgagctcttccttccaaatcctcaactccatggcaccggccgtg
caagagtgtgcgaaggcgctggacatcgtgatagttctggatggatcgaacagtatttac
ccctggaccagcattatcgatttcctgctccgcttcattgcaaaatttgatgttggccct
aaactcacacaggtgggcatagtgtcctatggattagacgtgactcaccgtgtcaacctg
agccagtttgacaacactgctaatctgctgaaatttgtcgaagaacttcctcagcagacc
ggcttcaagaccatgactttcctgggcattgatactgccaggaaggaggcctttattcca
gagcgtggtgcacgacctggggtgaagaaagtcatggtggttgtgactgatggagagtct
catgactcccacaacctagaccaggtcatcagtgactgccagaatgatggcattgagaga
tttggtattgctgtgttgggagactacaaccgtcagaacaaaagcgaagaagaagtgaag
aagttcatcaaagagattgagtccatctccagttcgcccttacgagatcacttcttcaac
gtctctgatgaggtggcgttgttgaccattgtggatgccctaggaagcaagatttatgcc
ttggaagctacatctggcaattccacctcctcatttgagatggaaatgtcccaagctggg
tttagtgcacatgcttctaaagatggcgtgttactgggagcagtgggagcttatgactgg
aatgggacagtggtaatgcaatctgctggtgaaaatgaaacagtcatcccagagagaaac
gccttcttcgactcaaaaactgaggctgggtatgaacgactggctgggtacctcggttat
gatgttgagtcagcatcatcgcccaatggagtgctgtacatcacaggtgcgccgcggtac
aaccacacaggccgcgttgttatctatcgtctagacaaaaagaacaagattgttgtctcg
cagatactgctaggagaacagattggttcttacttcggcagcgtcctgcagactgtcgac
gtggacaacgattcctacacggatctcctcttggttggagctccaatgtacatgggctca
gaaagaaatgagcagggacaagtctacgtttacaaacttaaccagggcggccagtttcag
caccagttcactttaaagcctatcaatcagtcctgctgtactgcccactcagagaactgc
actaataaaaatgaaccatgtggtgcccggtttggtacagccattgctgcagtaacggat
ctgaacctggacggctttaacgatgtggcaatcggtgcaccgtttgagaacgaccacaga
ggggccgtttacatctatcatggagataagaagtcactgaaagagaaatatgtgcagcgc
atcccagcaggtggggacggtgaaaaggtgaaattctttggtcagtccatacatggagtc
atggatctaaatggagatggaatcactgatgttactataggaggtctaggcggggcttca
ctgttctggtccagagatgttgcagagctccacgtcaacatgacttttgaccctgctaaa
ataaacttgcagcagtctcagcaccagtgtgaacgtggtggacgcatatctgtgtgtgtg
acgactgagatttgtttcatgtaccgcatcaaatctgaccagcagtattcaaacgctaat
gcagagatacaatataatttgactctggatggtctgcgcgcaaaagccagggcttcattc
ctcagctcggacgataaaagtgatcgtaagattaccaggcgcgtcaacgtcacagacaga
gcgaaagaaccctcctgtgtgaaggagatcttcatgatgtcgtcccggttggacttcaga
gaccctctcatggtgtctttgaagtttggattagtaaatgaagacaaaggtccagtcctg
gacgaaagccttcccagttccatcaataagactattcccttaatggagtgtgggagtgat
gagaggtgcattgcggacctctctctcaaagccgagtctagtgtaaaaaaaatggtgatc
aaagcaaacaaagagaagattgatgtgaacatcagagttaaaaacagcaaagacaatgca
tacaacaccaaagtcattgtcagcttcacgccaaacatcaactatgttacagtagagccg
aagaagtacgtgactctgaaccacaccagggtggagtttgctgttggatatcccttcctg
gcaagcaatgtagaggaaatcttcaaagtgaaatttgaagtgaatcccacacatattcag
gaggatattcagatcaatgtgactgcaacaagtgacagtgaggagctaccgtctaccttg
catgacaacactgtgcagatcgccattcctgtgacgtatgaagctggactcatattcaca
gtgcgccctgtggataaacacattgaaatacaggaccgtgagcagtatcccagcgtattc
aatgacaccacgatgattggagaggagatcagcatcagctacacggtggagaaaacaggt
gatatagtgactcctccccttgaccttagggtgacctaccctcgtatctctccttttcag
aacaacttactgtacctgacacatgtcaccaccagcccacaggtgaaatgtgatgctacg
catttgatcaaccctcataatattaacccggacattataaaacccaaaccaaagaaagaa
acactcggcgtcttcatactgagctgtgaaaaactcgattgtgcatcatttacatgctcc
atacccgaggataagatcaatcaggtcaacgttacattcagagtgtgggaacctacattc
attgaggcagagttttccagtctgtacatgttggtaaatgccactctgggaaccaaagac
acaaaactttttgtactgagcaaaagtgacagcagcagaactgtaaagatccaggtatca
aaggcaaccttaggaggaatccctatatggatcatcatcgtcagcatcctgataggtctg
ctgatcttagcacttgtcatcttcgttctctggaagatgggcttcttcaagagaaaatcc
agggactactcaaaggaggaagtaatggactga
DBGET
integrated database retrieval system
