Scomber scombrus (Atlantic mackerel): 133995587
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Entry
133995587 CDS
T10651
Symbol
sptan1
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04210
Apoptosis
ssco04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
133995587 (sptan1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
133995587 (sptan1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ssco04812
]
133995587 (sptan1)
Cytoskeleton proteins [BR:
ssco04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
133995587 (sptan1)
Intermediate filaments
Intermediate filament-binding proteins
133995587 (sptan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
SH3_9
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
SH3_2
SH3_3
SH3_10
SCO1-SenC
Motif
Other DBs
NCBI-GeneID:
133995587
NCBI-ProteinID:
XP_062291036
LinkDB
All DBs
Position
15:complement(27445704..27480771)
Genome browser
AA seq
2459 aa
AA seq
DB search
MDASGKVLETAEDIQERRLQVLDRYRRFKDLSIMRRQKLEDSYRFQFFRRDADELEKWIQ
EKLQIASDENYKDPSNLQGKLQKHQAFEAEVQANAGAIVKLDDTGNLMITEGHFASEIIR
TRLEELHRLWDLLLQKTKEKGMRLLQAQKLVQYLRECEDALDWISDKEAMATSEELGQDL
EHVELLQKKFEEFQTDLAAHEERVNEVNQIAAKLTQEAHPEGELIVRKQDEVNAAWQRLK
GLAQQRQGKLFGAAEVQRFNRDVDETISWIKEKEQLMASDDFGRDLASVQALLRKHEGLE
RDLAALEDKVNTLGGDAERLQQTHPMNASQIHLKKDELITNWEQIRTLAAERHARLNDSY
RLQRFTADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDAHEDSFRATD
EAGQALLNTGHYASDEVKEKLGILTEEKESLLELWEVRRQQYEQCMDLQLFYRDTEQVDN
WMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKLIQNNHYAK
EDVATRRDALLSRRNALHERAQSRRAALEDSFHLQQFFRDSDELKSWINEKMKTATDEAY
KDPSNLQGKVQKHQAFEAELSANQSRIDALQKSGQELLDGKHYASDEVAGRMEEVSSQWK
KLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGKDLTSVQNLQKKHA
LLEADVAAHQDRIDGITIQARQFQEAGHFDADNIRKKQEALVVRYEGLREPMAARKQKLS
DSLRLQQLFRDVEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQALQAEITGHEPRIK
AVTQKGDAMVEEGHFAGEEVKSKLGELHGRWDTLKAKASQRRQDLEDSLQAQQYFADANE
AESWMREKEPIVGSPDYGKDEDSAEALLKKHEALMSDLSAYGSSIQALKEQAQSCRQQVA
PTDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAYV
KKLDPTQSSSRENLLDEHGSIALRQDQIDNQYGTLLELGEKRKDMLEKSCKKFMLFREAN
ELQQWINEKEGALTNEEMGSDLEQVEVLQKKFDDFQKDLKANESRLRDINKVASELESEG
LMAEEAPMMQAQQQELLGSAPGMDEADSKTASPWKNVRLAVQTTANFNTIKELNNRWRSL
QQLAEERSNMLGSAHEVQRFHRDADETKEWIEEKNQALNTDNYGHDLASVQALQRKHEGF
ERDLAALGDKVNSLGETAERLIQSHPEAVDDIQEKCTELNTAWSSLVGRADQRKDKLGNS
HDLQRFLSDFRDLMSWINGIRGLVSSEELAKDVTGAEALLERHQEHRTEIDARAGTFQAF
EQFGQQLLARGHYASPEIQQKLEALDRERADLEKAWVQRRMMLDQCLELQLFNRDCEQAE
NWMAAREAFLASDDKGDSLDSVEALIKKHEDFDKAINVQEEKIAALQSFADQLIGADHYA
RPEISNRRDEVLDRWRRLKAQMIEKRSKLGESQTLQQFSRDVDEIEAWISEKLQTATDES
YKDPTNIQLSKLLSKHQKHQAFEAELHANADRIRGVIDTGNALIQRGACAGSEDAVRARL
NALDEQWQFLVNKSAEKSQKLKEANKQQNFNTGIKDFDFWLSEVEALLASEDYGKDLASV
NNLLKKHQLLEADISAHEDRLKDLNGQADSLMSSNAFDTTLVKDKRDAVNGRFTKIKSMA
SGRRAKLNESHRLHQFFRDLDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAEL
GAHEPAIQSVLDTGKKLSDDNTIGQEEIQQRLAQFVEHWKELKDLSGARGQRLEESLEYQ
QFVANVEEEEAWINEKLNLVGSEDYGDTLAAVQGLLKKHEAFETDFTVHRDRVNDVCANG
EELIKKNNHHVDNISAKMSALREKVSELERAAAQRKAKLDENSAFLQFNWKADVVESWIG
EKENSLKTDDYGRDLSSVQTLLTKQETFDAGLQAFQQEGITNITALKDQLLAAKHVQSKA
IEARHAALMKRWNQLLSNSGARKKKLLEAQEHFRKVEDLFLTFAKKASAFNSWFENAEED
LTDPVRCNSLEEIRALREAHEAFRSSLSSAQADFNQLDELDQQIKSYQVVSNPYTWFTME
ALEETWRNLQKIIKERELELQKEQRRQEENDKLRQEFAQHANAFHQWLQETRTYLLDGSC
MVEESGTLESQLEATKRKHQEIRAMRSQLKKIEDLGAAMEEALILDNKYTEHSTVGLAQQ
WDQLDQLGMRMQHNLEQQIQARNTTGVTEEALKEFSMMFKHFDKEKSGRLNHQEFKSCLR
SLGYDLPMVEEGEPDPEFESILDTVDPNRDGNVSLQEYMAFMISRETENVKSSEEIESAF
RALSTENKPYVTKEELYQNLTKEQADYCLSHMKPFLDSKGRELPTAFDFVEFTRSLFVN
NT seq
7380 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctcaggcaaagtgctggagacagcagaagacatccaggagcgccggctccag
gtgctggaccgctaccggcgcttcaaggacttgtcgatcatgcgccggcagaagctggag
gactcttaccgctttcagttcttccgccgcgacgccgacgagttagagaagtggatccag
gagaagctgcagatcgcctcagacgagaactacaaggacccctccaacctgcagggtaag
ctgcagaaacatcaggcctttgaagctgaagttcaggccaacgccggggcgatcgtcaaa
ctggacgacacaggaaacctcatgatcaccgagggccacttcgcctccgagatcattcga
acccgtctagaggagctgcaccgcctgtgggacctcctgctgcagaagaccaaggagaag
ggcatgcgtctcctgcaggcccagaaactggtccagtacctgcgcgagtgtgaagatgct
ctcgactggatcagtgataaggaggccatggccacttcagaagagctgggtcaggacctg
gagcacgtggagcttctgcagaagaagttcgaggagttccagacagacctggcggcccac
gaggaacgcgtgaacgaggtgaaccagattgcagccaaactgacacaggaggcccaccct
gagggcgagctgatagttcgcaagcaggacgaggtcaacgccgcctggcagcgtctgaag
ggcctggcccagcagaggcagggcaagctgttcggagctgctgaggtgcagcgcttcaac
agggatgtggatgagactatcagttggatcaaggagaaggagcagctgatggcctcagat
gactttggtcgtgacctggccagtgttcaggctctcctgcgcaaacatgagggtctggag
agagacctggctgctctggaagataaggtcaacacactgggcggggatgcagagcgcctg
cagcaaacacatcccatgaatgcttcccagatccacctgaagaaggatgaactcatcacc
aactgggagcagattcgcactctggctgctgagcgtcacgctcgcctcaacgactcctac
aggctacagcgcttcactgcagacttcagggatttgaccagctgggtgacagaaatgaag
gccctgatcaacgccgatgaactggccaatgacgtggccggagccgaggctctgctagac
cgccaccaggagcataagggagagatcgatgctcatgaggacagctttagagccactgat
gaagccggccaggccctgcttaatacaggacactacgcctctgatgaggtcaaggaaaag
ctgggcatcctaacggaggagaaagagtctctgctggagttgtgggaggtccgcaggcag
cagtacgagcagtgcatggacctgcagctcttttacagggatactgagcaagtcgacaac
tggatgagcaaacaagaggctttcctactgaatgaagaccttggagactctctggacagt
gtagaggcactgctgaagaaacatgaggactttgagaagtcactcagtgcccaggaagag
aagatcactgccctggacgagtttgctaccaaactgatccagaacaatcactacgccaaa
gaagatgtggctacccgcagagatgctctgctcagccgccgcaacgccctgcacgagcgc
gctcagtctcgtcgcgccgccttggaggactctttccatctgcagcagttcttcagggac
tcagatgagctcaagagctggatcaacgagaagatgaagaccgccactgacgaggcttac
aaggacccctccaacctgcagggcaaggtacagaaacaccaagcctttgaagctgagctg
tcagccaaccagagccgcatcgatgccctgcagaagtccggccaggagctgctggatggg
aagcactacgcctctgatgaggtggccggtcgcatggaggaggtcagctcccagtggaag
aaactgctggaggccactgagcttaaaggtatcaagcttcgtgaagccaaccagcagcag
cagttcaacaggaacgtagaggacattgagctgtggctgtatgaggttgagggtcacctg
gcctctgacgactatggaaaagacttgaccagtgtccagaacctgcagaagaaacacgcc
ctgctggaggctgacgtggccgctcaccaggaccgaatcgacggcataacaatccaggct
cgccagttccaagaggccggacactttgacgccgacaacatccgcaagaaacaggaggct
ctggtggtccgttacgaaggtctgcgcgagcccatggctgcacgcaagcagaaactgtcc
gactctctgcggctccagcagctgttcagagatgtggaggacgaggagacttggatccgt
gagaaggagcccatcgctgcctctactaacagaggtaaagacctgattggtgtccagaac
ctcctgaagaagcaccaggccctgcaggctgagatcaccggtcacgagccccgcattaaa
gctgtcacccagaaaggagacgccatggtggaagaaggacacttcgctggtgaggaagtg
aaatctaagctgggtgaactgcatggacgctgggacacactgaaggccaaggcctcccag
aggagacaggacttggaggactctctccaggcccagcagtacttcgccgacgccaacgag
gctgagtcttggatgagggagaaggagcccattgtggggagcccagactacggcaaagac
gaggactctgctgaggccctgctgaagaagcacgaggctctgatgtctgacctgagtgca
tatggcagcagcatccaggccctgaaggaacaggcccagtcctgcaggcaacaagtggca
ccaactgacgatgagactgggaaggagctggtcctggctctgtacgactaccaggagaag
agtccacgtgaagttactatgaagaagggcgacatcctcaccctgctcaacagcaccaac
aaggactggtggaaggtagaggtgaatgatcgacagggcttcgttcctgctgcttacgtg
aagaaactggaccccacccagtcctcttccagggaaaacctgctggatgaacacggcagc
atcgcactgcgccaagaccagatcgacaatcagtacggcactctgttggagctgggagag
aaacgcaaggacatgttagagaagagctgcaagaagttcatgttgttcagggaggccaat
gagctgcagcagtggatcaacgagaaggagggcgccctgactaatgaagagatgggctct
gacctggagcaggtggaggtcctgcagaagaagtttgacgacttccagaaggatctgaag
gccaacgagtctcgcctgagggacatcaacaaagtggcatctgagctggagtctgaaggc
ctcatggctgaggaggctcccatgatgcaggctcagcaacaagagctgcttggttctgct
cctggcatggatgaagctgattctaagaccgcatctccatggaagaatgtacgcttggct
gttcaaacaacggctaactttaatactatcaaggagctgaacaatcgctggaggtccctg
cagcagctggctgaagaaaggagtaacatgctgggcagtgcccacgaggtgcagagattc
cacagggatgctgatgaaactaaagaatggattgaggagaagaaccaggccctcaacact
gacaactatggtcacgacctggccagtgtccaggctctgcagcgtaaacacgaaggcttt
gagagagacctggcagccctgggtgacaaggtgaactctctcggagagacagcagagcgt
ctgatccagtcccaccctgaagcagtggacgacatccaggagaaatgcactgagctgaac
acggcctggagcagcctggtgggacgtgccgaccagcgcaaagacaagctgggcaactct
catgacctgcagcgcttcctgtctgacttcagagatctgatgtcctggattaatggcatt
cgaggactggtgtcttcagaggagctggctaaagatgtgactggagcagaggcccttcta
gaaagacaccaggaacaccgcactgagatcgacgctcgtgctggaaccttccaggccttc
gaacagttcggtcagcagctgctggctcgaggccattacgccagtcctgagatccagcag
aaactggaggctctggaccgcgagcgtgccgacctggagaaggcctgggtgcagcgccgc
atgatgctggaccagtgccttgagctccagctcttcaacagggactgtgaacaggccgag
aactggatggcggctcgtgaagctttcctcgccagcgacgacaagggagactccctggac
agcgtggaggccctcatcaagaaacacgaagactttgacaaagccattaacgtacaggag
gagaagatcgcagctctgcagtcctttgccgatcagctgattggagctgatcattacgcc
agacctgagatctccaatcgccgcgatgaagtgcttgacaggtggcgtcggctgaaggca
caaatgattgaaaagcgttctaagctgggtgaatctcagaccctgcagcagttcagccgg
gacgtggacgagatagaggcgtggatcagtgagaagctgcagaccgcaaccgacgagtcc
tacaaggacccgaccaacatccagctgtccaagctgctgagtaaacaccagaagcatcag
gcgtttgaagccgagctgcacgccaacgcagaccgaatccgcggggtcatcgacaccggt
aacgccctgatccagagaggagcctgtgctggcagcgaggacgcagtcagggctcgtctc
aacgctctggatgaacagtggcagttcctcgtcaacaaatcagcagaaaagagccagaaa
ctgaaagaagccaacaagcagcagaacttcaacacaggcatcaaggacttcgacttctgg
ctttctgaggtggaagctcttctcgcctctgaggattacggtaaagatctggcatcagtc
aacaacctgctgaagaaacaccagctgctggaggctgatatttctgcccatgaggatcgt
ctgaaggatctgaatggccaggccgacagcctgatgtccagtaacgccttcgacaccaca
ctggtgaaggacaagcgcgacgccgtcaatggccgcttcaccaagatcaagagcatggca
tccggccgccgcgccaaactcaacgagtcccaccgcctgcatcagttcttcagggacctg
gatgatgaagagtcttggatcaaagaaaagaagttgcttgttagttcggaggactacgga
cgtgatttgacaggagtacagaatctgaggaagaaacacaagaggctggaggccgagctg
ggagcccacgagccggccattcagtcggtgctggacactgggaagaagctgtctgatgac
aacaccatcggtcaggaggagatccagcagaggcttgcccagtttgtggaacactggaag
gaactcaaagacttatctggagcaaggggacagagactggaggagtcgctggagtaccag
cagtttgtggcgaatgtggaagaggaagaagcttggattaatgagaagttgaatctggtg
gggagcgaggactacggagacacgctggctgcggtgcagggcttgctgaaaaagcatgaa
gcatttgagacagacttcaccgtgcacagagacagagtcaacgacgtgtgcgctaacgga
gaggagctcatcaagaagaacaaccatcacgtggacaacatcagtgccaagatgtcggct
ctgagagaaaaagtgtctgagctggagagggcagcagctcagaggaaagccaagctggat
gaaaactcagctttcctgcagttcaactggaaggctgacgtggtggagtcctggatcggt
gagaaagagaacagcctgaagactgatgactacggcagagacctgtcctccgtgcagacc
ctgctcaccaagcaggagacatttgatgctggtctccaggccttccagcaggagggcatc
accaacatcacagctctcaaagaccagctgctggccgccaagcacgtccaatcaaaagcc
atcgaagctcgccatgctgccttgatgaagcgctggaaccagctgctgtctaactcaggc
gctcgcaagaagaagcttctggaggctcaagagcacttcagaaaggttgaggacttgttc
ctgacattcgccaagaaagcgtcggccttcaacagctggtttgagaacgcagaggaggat
ctgacagaccccgtgaggtgcaactctctggaggagatccgggcgctgcgcgaagcccac
gaggccttccgctcctcgctgagctcggcccaggcagacttcaaccagctggacgagctg
gaccagcagatcaagagctaccaggtggtgtccaacccctacacctggttcaccatggag
gccctggaggagacctggaggaacctgcagaagatcatcaaggagcgagagctggagcta
cagaaggagcagaggaggcaggaggagaacgacaagctgcgtcaggagtttgcgcaacac
gccaacgctttccaccaatggctgcaggagaccaggacatatctgctggacgggtcgtgt
atggtagaagagtcgggaacactggagtctcagctggaggccactaagcgtaagcaccag
gagatccgggccatgcgcagccagctgaagaagattgaagacttgggagcagctatggaa
gaagcactgatcttagataataaatacacagagcacagcacagtggggctggctcaacag
tgggaccaactggatcagctgggaatgaggatgcaacacaacttggagcaacagatacag
gccaggaacaccactggagtgacagaagaggctctgaaggagttcagtatgatgttcaag
cacttcgacaaggagaagtcaggtcgtctcaaccaccaggagttcaagtcatgtctgcgc
tcgctgggctacgacctgcccatggtggaagaaggagaaccagatcctgagtttgagtcc
atactcgacactgtggatcccaacagggatggaaacgtgtcgttgcaggaatacatggcg
ttcatgatcagccgcgagacagagaacgtcaagtccagtgaggagatagagagcgccttc
agagctctcagcaccgagaacaaaccctacgtcactaaagaagaactctatcagaacttg
accaaggaacaggcagactactgcctgtcacacatgaagcccttcctcgacagcaagggc
cgcgaactgccgacagctttcgactttgttgaattcacccgctcgcttttcgtcaactga
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integrated database retrieval system
