Scomber scombrus (Atlantic mackerel): 133995628
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Entry
133995628 CDS
T10651
Symbol
tmc6b
Name
(RefSeq) transmembrane channel-like protein 6b
KO
K21988
transmembrane channel-like protein
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssco02000
]
133995628 (tmc6b)
03037 Cilium and associated proteins [BR:
ssco03037
]
133995628 (tmc6b)
Transporters [BR:
ssco02000
]
Other transporters
Pores ion channels [TC:
1
]
133995628 (tmc6b)
Cilium and associated proteins [BR:
ssco03037
]
Other cilia and associated proteins
Stereociliary proteins
133995628 (tmc6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
133995628
NCBI-ProteinID:
XP_062291089
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All DBs
Position
2:10099000..10111587
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AA seq
836 aa
AA seq
DB search
MARSVNFDLSHPLMEIGLESPVDEEGVHDSFNQLIAEQSQTGESEAFELQQLQRELDEEG
RDNVAYLSSPGHEFRGGRQQRGVEWEDDERQIDPLIGEQWSSATLRVLSSMPSRTIGRNR
GAIISQYYNRTMQLRRRRQSRPSIRHLDRSARPSIRDYAMEGDSVDAEGNKRERLVNNLQ
NLSVNDRIRMLRAMPLSVAEKRGLRRSALNKERRTSSGSGIPCCSQLKFYIIIAVRQSWY
SWLSFLHSLQLWQVALKRVSGRFGTGVLSYFLFLKTLLFFNLFLFLVTGVFMVLPQAVHP
PVPVVNRSFSGLELLTGAGYFSDTVMYYGHYSNVTLHKSCRDDDGGKDVFVSNETSLEVK
ASCKSKHLSYNMPLAYFFTIGSAFFITCIILVYSMSKSFGRSFRIDKSQSILALKVFCCW
DYRVFKKTSVKLMSENICIQLKELLAEVSHKQDKVTMCQKLWRLTVHGLAWAICIGSITA
CVSGIYFFSEHMHKNLQQRTRNNSKDPLLKEASLLALPVVVSLINLLLPGLFNLAAWMEE
YESPSVRTYVAISRNLLLKVSVLAVLCYHWLGRVAAEPESIGLTCWESFVGQELYRFLLM
DLIFTLLDTLFGEFLWRLFSERVLKRRRKPVFDIPRNVLELIYGQTLAWVGVLFTPPLPA
VQLLKLLLLFYVKKSSVMMNCQAPRKPYRVSQMTTIFITLLCFPSFLGASVSVTYTMWSI
TPSKTCGPFRELKTMFQAGKRWVEQLEKDNPNLSMLAKAHSYLVENPFFLFVGAGIFLIV
IYFHSQVVDGQRKIINLLQEQIENEGEDKKFVITRLQSIHEQKRTPNRLTSQDSGC
NT seq
2511 nt
NT seq
+upstream
nt +downstream
nt
atggctcgaagcgttaactttgacctcagtcacccgctcatggagattggactggagagc
ccagtagatgaggagggcgttcacgactcgttcaaccagctgatagcagaacagtctcag
accggagaatctgaagcattcgagttgcagcagctgcagagagaactggacgaggagggt
cgagataatgtggcctacctttccagccccggccatgagtttaggggaggtaggcagcag
cgaggggtggagtgggaggacgatgaaagacagatagatcccctcataggtgaacaatgg
tcatcggccacattgagggtcctgtcctccatgcccagccgcaccatcggccgcaacagg
ggagctatcatctctcagtactacaacagaaccatgcagcttcggagacgcaggcagagc
agaccctccattagacacctggatcgctccgccaggccaagcatacgagattacgccatg
gagggggacagcgtagatgcagaggggaacaaaagagaacgtctggtgaacaacttgcag
aatctctcagtgaacgacagaatcaggatgctccgagcgatgcctctcagtgtggcagag
aagagaggactcaggaggtcagcattaaacaaggagagacgcacatcgtcaggcagtggg
atcccctgttgcagccaactcaagttttacatcatcatcgctgtgagacagagctggtac
agctggctgtccttcctgcactccctccagctgtggcaagtggcactgaaaagagtgagc
ggccgcttcggcactggtgtcctctcgtacttcctgttcctcaagaccttactcttcttc
aacctcttcctgttcctggtgacgggggtgttcatggtccttcctcaggcagtgcaccct
ccagtgcctgtagtgaatcgctccttctctggactggagctcctcactggagcgggctat
ttctcagacacagtgatgtactatgggcactactctaacgtcacactgcataagagctgc
agggacgatgatggagggaaggatgtctttgtgtccaatgaaactagtctggaagtcaaa
gcttcttgcaagtcgaagcatctttcatacaacatgccacttgcatacttcttcaccatc
ggatcggccttcttcatcacttgtatcattcttgtgtacagcatgtcaaagtcgtttggt
cgaagcttccgaatcgacaaatctcagagcatcctggccttgaaggtcttctgttgctgg
gactacagggtcttcaaaaaaacctctgtcaagctcatgtctgagaatatctgtatccag
ctcaaggagctgctagcagaagtgagtcataaacaggacaaggttactatgtgtcagaag
ctgtggagactgacagtccacggcctggcctgggctatctgcatagggagcatcaccgcc
tgtgtgtccggcatttacttcttctctgagcacatgcataagaacctccagcaacgtact
cgtaacaactcaaaggaccccttgttgaaagaggccagcctgctggctctccctgtggtg
gtgtccctcatcaacctgctgctgcccggcctgttcaacctggcagcctggatggaggag
tacgagtcgccttctgtacgcacatacgtcgccatcagcagaaatttgctgttgaaagtg
agcgtgctcgcagtcctctgctaccactggctgggtcgagtggctgctgaaccagaaagt
attggcctcacgtgctgggagagttttgttggccaggagctttatcgcttcttactgatg
gacttaatcttcactctactggacaccttgtttggagaatttctttggaggttgttttct
gagagggtgctgaagagaagaaggaaaccggtgtttgatatcccaaggaacgtcctggaa
ctcatctatggacaaacactggcctgggtgggagttctcttcactcctcctctgcctgca
gttcagcttctcaaactcctgctgctcttttatgtaaagaagagcagcgtgatgatgaac
tgtcaggctcccaggaagccatacagagtcagccagatgacgaccatcttcatcactctc
ctctgtttcccctccttcctcggtgcttctgtgtctgttacatacaccatgtggagcatc
acgccatcaaaaacatgcggtccattccgtgaacttaaaaccatgtttcaggcaggaaag
cgctgggtggaacaactggaaaaagataatcccaacctgtccatgctggccaaggcgcac
tcttatctagtggaaaacccttttttcctgtttgtgggagcgggcatctttctgatagtc
atctacttccacagtcaggtggtggatggtcagaggaagatcatcaacttactgcaggag
cagatagaaaacgagggagaggataaaaagtttgtgataactcgtctgcagtccatacac
gagcagaaacgaacccccaatcgactcacaagtcaggactctggctgttga
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