Scomber scombrus (Atlantic mackerel): 133995672
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Entry
133995672 CDS
T10651
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
Pattern recognition receptors [BR:
ssco04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
133995672
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133995672
NCBI-ProteinID:
XP_062291130
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Position
15:complement(1501281..1506058)
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AA seq
1046 aa
AA seq
DB search
MKSDWSMASPLHFKSERDLQQSLEVPSDQSTQQHPTPMDSIFTLLEENIFTFVKNELKNM
QKVLCPDNPECLDSHEDHEEVLDGEEEERRSSRDAFLKITLHFLKTMKQEELAERLQSRT
RVAEGRHKLKSNLKKKFQCLFEGIAKAGNPTLVNQIYTPLYITEGGTAEVNDEHEIRQIE
TASRKPDRPETTIRQEDIFKASPGRDEPIRTVMTKGVAGIGKTVLTQKFTLDWAEEKANQ
DIHFTFPFTFRELNVLKEKKYSLVELVHHFFTETKEAGICRFEEFQVVFIFDGLDECRLP
LDFHNNEILTDVTESTSVDVLLTNLIRGKLLPSARLWITTRPAAANQIPPECVGMVTEIR
GFTDPQKEEYFSRRLIDEKQASTIISHIKTSRSLHIMCHIPVFCWITATVLEDVLKSREG
EQLPKTLTEMYIHFLVVQSKVKNIKYHGGAETDPHWSPESRKMIESLGKLAFEQLQKGNL
IFYESDLTECGIDIRAASVYSGVFTQVFKEERGLYQDKVFCFVHLSVQEFLAALHVHLTF
INSGVNLLTGKQTKSQKSKTLRNKSELFYQRAVDEALQSPNGHLDLFLRFLLGLSLQTNQ
TLLRGLLTQTGSSSQTNQETVDHIKKKISENVSAERSINLFHCLNELNDRSLEEEIQQYL
RSGSLSTDKLSPAQWSALVFILLSSGKDLDVFDLKKYSASEEALLRLLPVVKASNKALLS
LCKLSERSCAALSSVLSSQSSSLRDLDLSNNNLQDSGMKLLSNGLKSPHCTLETLRLSGC
LITEEGCASLASALSSNPSHLRELDLSCNHPGDSGEKLLSAGLEDPHWRLDTLSLQPGGV
QWLKPGLKKYSCELTLDPNTANRELKLSDNNRKVKHVEEVQSYPDHPERFDCRPQLLCRD
GVTGHCYWEVEWRGKVHVSVSYRGISRKGDSDDCRFGGNDQSWSLFCSDDGYSVWHNNRI
TSIPSSSSSSSSVSHRVAVYVDYPAGSLTLYRVSSDTLIHLHTFNTTFTEPLYAGFGFWS
DWFGSSVSLCSLQEGESAPENLYHVI
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtgactggtccatggcttcccctctacattttaagagtgaaagagatctgcag
cagagcttagaggttcccagtgatcagtctacccagcagcatccaacccccatggactcc
atattcacgctgctggaggagaacatcttcacttttgtgaagaacgagctgaagaacatg
cagaaggttctatgtccagataacccagaatgcttagacagtcatgaggatcatgaggaa
gttttggatggtgaggaggaagagaggaggagcagcagagatgcgtttctgaagatcaca
ctgcacttcctgaagacaatgaagcaggaggagctggctgagcgtctgcagagcagaact
cgtgttgcagagggtcgacataaactgaagtccaacctgaagaagaagttccagtgtctg
tttgaggggatcgctaaagcaggaaacccaacccttgtgaatcagatctacacaccgctc
tacatcacagagggagggactgcagaggtcaatgatgaacatgagatcagacagattgaa
acagcatccaggaaaccagacagaccagaaacaacaatcagacaagaagacatctttaaa
gcctcacctggaagagatgaaccaatcagaacagtgatgacaaagggagtggctggcatt
gggaaaacagtcttaacacagaagttcactctggactgggctgaagaaaaagccaaccag
gacatacacttcacatttccattcactttcagagagttgaatgtgctgaaagagaaaaag
tacagcttggtggaacttgttcatcacttctttactgaaaccaaagaagcaggaatctgc
aggtttgaagagttccaggttgtgttcatctttgacggtctggatgagtgtcgacttcct
ctggacttccacaacaatgagatcctgactgatgttacagagtccacatcagtggatgtg
ctgctgacaaacctcatcagggggaaactgcttccctctgctcgcctctggataaccaca
cgacctgcagcagccaatcagatccctcctgagtgtgtcggcatggtgacagagatcaga
ggattcactgacccacagaaggaggagtacttcagcaggagattgatagatgagaagcag
gccagcaccatcatctcccacatcaagacatcacgaagcctccacattatgtgccacatc
ccagtcttctgctggatcactgctacagttctggaggatgtgttgaaaagcagagaggga
gaacagctgcccaagaccttgactgagatgtacatccacttcctggtggttcagtccaaa
gtgaagaatatcaagtatcatggaggagctgagacagatccacactggagtccagagagc
aggaagatgattgagtctctgggaaaactggcttttgagcagctgcagaaaggcaacctt
atcttctatgaatcagacctgacagagtgtggcatcgatatcagagcagcttcagtgtac
tcaggagtgttcacacaggtctttaaagaggagagaggactgtaccaggacaaggtgttc
tgcttcgtccatttgagtgttcaggagtttctggctgctcttcatgtccatctgacgttc
atcaactctggagtcaatctgctgacaggaaaacagacaaaatcccagaaatctaaaaca
ttaagaaacaaatctgaactcttctaccagagagctgtagatgaggccttgcagagtcca
aatggacacctggacttgttcctccgtttcctcctgggtctttcactgcagaccaatcag
actctcctacgaggtctgctgacacagacaggaagtagctcacaaaccaatcaggaaaca
gttgaccacatcaagaagaagatcagtgagaatgtgtctgcagagagaagcatcaatctg
ttccactgtctgaatgaactgaatgatcgttctctagaggaggagatccaacagtacctg
agatcaggaagtctctccacagataaactgtctcctgctcagtggtcagctctggtcttc
atcttactgtcatcaggaaaagatctggacgtgtttgacctgaagaaatactctgcttca
gaggaggctcttctgaggctgctgccagtggtcaaagcctccaacaaagctctgctgagt
ttgtgtaagctctcagagagaagctgtgcagctctgtcctcagttctcagctcacagtcc
tccagtctgagagatctggacctgagtaacaacaacctgcaggattcaggaatgaagctt
ctgtctaatggactgaagagtccacactgtacactggaaactctcaggttgtcaggatgt
ctgatcacagaggaaggctgtgcttctctggcctcagctctgagctccaacccgtcccat
ctgagagagctggacctgagctgcaatcatccaggagactcaggagagaagcttctgtct
gctggactggaggatccacactggagactggacactctcagcctgcagcctggtggagtc
caatggttgaaaccaggtctgaagaagtattcctgtgaactcacactggatccaaacaca
gcgaacagagagctcaaactgtctgacaacaacaggaaggtgaaacatgtggaggaggtt
cagtcctaccctgatcatccagagagattcgactgccggcctcagctgctgtgtagagat
ggtgtcactggtcactgttactgggaggtcgagtggagaggaaaggttcatgtatcagtg
agttacagaggaatcagcaggaaaggagacagtgatgactgcagatttggagggaatgat
cagtcctggagtctgttctgctctgatgatggttactctgtctggcacaataacagaata
acatccatcccctcctcctcctcctcctcctcctctgtctctcacagagtagcagtgtat
gtggactatcctgctggctctctgaccctctacagagtctcctctgacacactgatccac
ctccacaccttcaacaccacgttcactgaacctctgtatgctgggtttgggttctggtct
gactggtttggctcctcagtgtctctgtgttctctgcaggagggagagtctgcccctgag
aatctgtatcatgttatttag
DBGET
integrated database retrieval system
