Scomber scombrus (Atlantic mackerel): 133995700
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Entry
133995700 CDS
T10651
Name
(RefSeq) CD276 antigen homolog
KO
K06745
programmed cell death 1 ligand 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133995700
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ssco04090
]
133995700
CD molecules [BR:
ssco04090
]
Proteins
133995700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
NACHT
V-set
I-set
C2-set_3
ig
Ig_2
nSTAND3
NPHP3_N
AAA_22
AAA_30
C2-set_2
AAA
NB-ARC
RuvB_N
AAA_16
RIFIN
PhoH
AAA_11
DEAD
TsaE
Ig_CD22
Mg_chelatase
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
133995700
NCBI-ProteinID:
XP_062291156
LinkDB
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Position
15:complement(5353532..5361765)
Genome browser
AA seq
495 aa
AA seq
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MDWALVFVLQVTFLPFITSQGLFKVEAKPNKYSSELGGDVVMTCRFDPVPLNPLTGLKVY
WYWTTNNLVRKVYVMEYGKNNLSLQDVDFQGRVKLNTEELQNGLAMLQVSRLKMNDSGTY
QCLMETELGTDYKKMTLTVTAPYKAVTRHIQEVADRDELLLTCQSEGYPESPVVWQDGQL
QNIISNTTSVSTPDQLFKVTSQIHIKSLEKNNYTCTFTNDGHNATFHIPDDIPNHPVKND
ALIVILIIGLILLIIVAVLTYQQRKGSGTHNTGNRLVNGRGGFVSAPVCLQIGKENDEDL
RENLGASLKAHYADYSFSTEMGRHWDHPHRLQNNEGQPATLQSLLPEAEEMLFLEGPPGS
GKTALAHILISSWAKGPTDTLTNLLDLSILHLLLYVDCSTAKGDLFQEIISQLSLGEKVS
TEELRTVLTRSNDALLLLDGYREGDQLFDDSLKTFISERRGCRVLVMACPGHCPILRETV
GTRELLKLQTQTVKY
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggactgggcccttgtctttgttttgcaagtcacgtttctcccatttatcacatctcaa
ggcttgttcaaagttgaggctaagccaaacaaatactcatcagagctcggaggagatgtt
gtgatgacgtgcaggtttgaccctgtaccattaaatcctcttactggcctgaaggtttac
tggtactggaccacgaacaacttggttcggaaggtgtatgtgatggaatatgggaagaat
aacttgtcactccaggatgtggacttccagggcagagtgaagcttaatactgaggagctg
cagaatggcttggctatgttacaggtgtccaggctcaaaatgaatgattcgggaacctac
cagtgtttgatggagacagaactagggactgattataaaaagatgacgttgactgttaca
gcaccatataaagccgtgactcgacacattcaggaggttgcagaccgggatgagttgctg
ctgacatgccaatctgagggatatcctgagtcccctgttgtgtggcaggatggacaactg
caaaatatcatttccaacaccacttctgtgtcaacaccagaccagctttttaaagtcacc
agtcagatacacatcaagtcattggagaaaaacaactacacctgtaccttcacaaatgat
ggccacaatgcaacatttcatattccagatgacataccaaaccatcctgtaaaaaatgat
gctctcatcgttatattgatcataggcttgattctgctcattattgttgccgtgctcact
taccaacaacggaaaggatccggcacccacaacactgggaaccgtctggtcaatggtcgt
ggcgggtttgtttctgctcctgtctgcctacaaatagggaaagaaaatgatgaagattta
agggaaaatctgggggcgtctctgaaagcccattacgctgactactcattcagcacagag
atgggacgccactgggatcaccctcacagactacagaacaatgagggccagccagcgact
cttcaatccttactcccagaagctgaagagatgctttttcttgagggacccccaggaagc
gggaagacggccctagcccacatcctgatctcctcttgggctaagggtcccacagatacc
ctcactaacctccttgatctcagcatacttcatcttctcctatatgtggactgtagcact
gcgaagggtgacttgtttcaagaaataatatctcaactgtctctcggggaaaaggtatca
acggaggagctgaggactgtgttaaccaggtccaacgatgctctgctgttgttggatgga
tacagagaaggggaccaattattcgatgattccctgaagacgtttataagtgaaagaaga
ggatgcagggtgttggtcatggcctgccccggacactgccccatactcagggaaacagtt
gggacaagagagctgctgaagctccaaacacaaactgtgaaatactga
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