Scomber scombrus (Atlantic mackerel): 133995729
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Entry
133995729 CDS
T10651
Name
(RefSeq) lipoxygenase homology domain-containing protein 1
KO
K24822
lipoxygenase homology domain-containing protein 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ssco03037
]
133995729
04990 Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
133995729
Cilium and associated proteins [BR:
ssco03037
]
Other cilia and associated proteins
Stereociliary proteins
133995729
Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
Other domain-containing proteins
Others
133995729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLAT
ATS3
DUF7755
Annexin
DUF3987
Motif
Other DBs
NCBI-GeneID:
133995729
NCBI-ProteinID:
XP_062291185
LinkDB
All DBs
Position
15:10524873..10554512
Genome browser
AA seq
2331 aa
AA seq
DB search
MPSKQKNSTASEETEEVDDEVEETEPKVKERSNKVTCEDATKGEKGRKKNKSVKSSENQE
EKSGKLKEEVTEGTKEEKKKKKKKSSTENPEGGEEMSSKDKKSKDGKKKKKHDEDKKKKG
KKSKAKQVDYAVIYQNELFNYHTDSSDGYEDEYYKKKVYEVVTVTGDVKGAGTDANIFVT
LFGEFGVTPKVGLASKSRTAFEKNKTDVFRIKTHNVGPVKKLRIEHDNTGMNASWFLDRV
VVTDMHRPHLRFYFACNNWLSREEGDNLFVRDLLASKDPMDVPKLNKYLVSVFTADMKGS
GTDADVFLNIFGENGDTGEKRLDSDKDNFERGSEDKFTIEAPNLGRLKKITIGHNNRGSS
AGWFLDKVVIDDMGNKEVYEFLVNNWFAMDEAEGKIQRDVLVGSLQPMAIVYNVQVMTGN
VRGAGTNSKIHMVMHGSKGIKNSGKVFLEGGTFERGLIDIFNVEICELISPLSRVTIGHD
NGAVGAGWYCEKVVIYCAFTGIEQTFQCGRWLDEDEGDGLIERELFEMVSLRQKKQKKYP
WSVWVWTSDVKGSGTDAQVFLQIYGEKGKSDEIKLESKSDSFEQAQLDKFVIEMPDIGRL
LKLRIWHEKRNPFSGWHLARVTLLKTLTKEKYSFECGRWLDINEDDNEIIRELPATGALI
DEPLLLIKYRVTICTGNVRGSGTDASVFVNLFGDLGDTGERLMIMSKTNVNKFEKGNHDE
FLIESVSLGQVRRVRVGHDGSGGGCGWFVDKVLVREEGQPESLAIEFPCYRWLDRNEDDG
QIVRELVPAGDGLRLFNVSYHVAIKTGSVNGASSDSKVFVKLYGEKCDTNKMILAVSDND
LRNYFETGRTDIFTIETFDVGQISRFLIGHTNEGLRAGWFLDSVKISVPVHGKEYMFPSH
RWLCKDEADGKVEVEIYPSEVLDIEQLINYEVTVVTGDVRTAGTNANVFCQMYGEEGKTE
VLPLKNRSNNFERGTTEIFKIEALDIGKIYKIRICHDGKGVGDGWFLDKVDIKRLTVAMV
QIEVKKEDTKKDKKKDKKKKKKEDEVEIVEELQEVVKTFSFPCNRWLARDEEDGEIVVEL
LTEDDEDLEVNSYEVHVFTGTMWGAGTDANVYINIYGEIGDTGERRLRKSNHLNKFEKGQ
EDIFNITAVDLGALKKLRIRHDHSQASAGWFLERVEIIDNKDDTTYFFPCKRWLAIDEDD
KQLARELVPVDEAFMKKGDDDDEDSDAALGLEQKAMSTTYTVKIKTGDKKYAGTDANVFM
ILYGTKDDTGIINLKASKTNKNKFERGLIDEFTVEAVDIGPLKKLRIGHNNSGGGSGWFV
DWVEIDAPSLGQKLRFPCGRWLDKGEDDGAIARDLFPNPLQTELYTPFVPYEIKIFTSDV
FGAGTDADVFIVLYGRDAVCSHQKSLCVNKRERRMYFKRGAEDMFIVELKDVGDVIEKIR
IGHDNRGVNPGWHLDRVEIRRLLRKGKGSETVIFPCECWLAKSEDDRETVRELVPSDIIT
EKLSRDGSLKVTEIEVEDALETHTYTVSVMTGDVYGAGTDANVFLTIYGDMGDTGERKLS
KSETNRNKFERGSVDEFTIEAVDLGQVFKIKIRHDNSMISADWYLDQVEVVDVDTEEVFI
FLCERWLSRKREDGRIERFFYVKDYEGVRESLNSKKNSALMVKSVDSNMNKKNKKKKEEE
MELPIIPYHITICTGLERDAGTTSRAYVIIIGANHTQTERLWLDLLDGRKGFEAGSLENF
ETYGSDLGEIKKVELGHDGATSESCWLVDELSVAVPTKGVTYVFACKCWLAKDRGDGLTA
RVFNVLDAEAISISQKIIYEVTVVTGDVQNAGTDTQIFMSVFGANGSTEEMLLQKNEDRF
ERGQEDTFTMEIDDIAPLRKMRLRIDGSGSRPDWFFNQVIMRNLTTEEVSVFTYEDWLSR
MRGPKRTMICEMAAVVDEETMVELTTYIIQVKTSDVTGAGTDANVWVIIFGENGDTGTLA
LKECNKSNKFERKQTDTFHFSDILSMGELSKVRVWHDNTGPAPGWHLEYIDVKDEIMDKT
FRFPCDRWLAKNDDDGQIMRELACANNDYLDLNEKTKYEICITTGDTETKENGWIVLEGR
KGRSKEFVMENSSKKRRFLRGNVDRFEFSSKNLGDIAGICLGHTPKDGKKVKGEFHWHVV
EVAVTERELGNKYIFSCNALIPLSSKRDEFLTFECAKTIESFASKARSLVPVKYEIIVIT
GDEKGAGTDANVFITIYGSNGDSGRRQLRQKFRNLFEREQTDRFLVEMLDMGELQKVRVE
HDNTGLSPGWLLDRVEVTNTANGVTTIFLCRKWLDTKLADGQIVRVIYPKY
NT seq
6996 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcaaaacagaaaaactccacagcttcagaagaaaccgaagaggttgatgacgaa
gtggaggaaacagagccaaaagtaaaggagaggagcaacaaagtgacctgtgaggacgcc
acaaaaggagagaaaggtcggaagaaaaacaagagtgtgaagagctcagagaatcaggag
gaaaaatcagggaaactcaaagaggaagtgactgagggaacaaaggaggaaaagaagaaa
aagaagaagaaatcctccacagagaatccagaggggggcgaggagatgagctccaaagac
aagaagtctaaagacggcaagaagaagaagaagcatgatgaagataaaaagaaaaagggg
aaaaaatccaaagctaaacaggtggactatgctgtgatctaccagaacgagctgtttaac
taccacacagactcatcagatggatatgaggatgagtactacaaaaagaaagtgtatgag
gtggtcactgtcactggtgatgtaaaaggagccgggactgatgctaatatttttgttact
ctttttggagaatttggcgtcacgcccaaggttggcctggcaagcaaaagcagaactgca
tttgagaagaataagaccgatgttttccgtataaaaacacacaacgtggggcctgtgaag
aagctgaggattgagcacgacaacacggggatgaacgccagctggttcttggacagggtg
gtggtgaccgacatgcaccggccccatctgcgcttctattttgcctgcaacaactggctg
agtcgggaggagggtgacaacttgtttgtcagggacctgctggccagcaaggaccccatg
gacgtcccaaaattgaataaatacttagtgagtgtcttcactgctgacatgaagggaagt
ggaactgatgctgacgtcttcctgaatatctttggagagaatggcgacacaggagagaaa
cgactggacagtgacaaagacaactttgaacgcggctcagaggacaagtttacgatagag
gctccaaacttgggaaggctgaagaaaatcaccatcggccacaacaacagaggttcatca
gctggatggtttctagataaggtggtgattgatgacatgggaaataaggaggtgtacgag
ttcttagtcaataactggtttgctatggatgaagctgaaggcaaaatacagagagatgtg
ttggttggatcattgcaaccaatggctattgtatacaacgtacaagtgatgactggaaat
gtgaggggtgcgggcaccaactcaaagatccacatggttatgcatggctccaagggcata
aaaaacagtggcaaagtcttcctggagggcggtactttcgagcgtggtctcatcgacatt
ttcaatgtggagatttgtgaactgataagcccactcagcagggtcaccatcggacatgat
aatggggctgttggtgccggatggtactgtgaaaaggtggtgatatactgtgcgtttacg
ggcattgagcagacatttcagtgtgggaggtggctggatgaagatgagggggatggactg
attgagagggagctgttcgagatggtctctctcaggcagaagaaacagaagaagtaccca
tggtccgtgtgggtttggacctcagatgtgaaggggtcagggacagatgcccaggtgttt
ctgcagatttatggagagaaaggcaaatctgatgagatcaaactggaaagcaagtcagac
agttttgaacaggcccagcttgataaatttgtgattgaaatgccagacataggaagactg
ctgaaactgcgcatctggcacgagaagaggaatccattttctggctggcatttagcaagg
gtcaccttgctgaagaccctgacaaaggagaaatactcttttgaatgtggccgttggctg
gacatcaacgaagatgacaatgagataatcagagagctgccagctactggagcgctcatt
gatgagccactgctgttgataaagtatcgtgtcaccatctgcaccggcaacgtcaggggc
agtggcaccgatgccagcgtcttcgtaaatcttttcggcgacctgggcgacacaggggag
cgactcatgatcatgagcaaaaccaatgtcaacaaatttgaaaagggcaaccatgatgag
tttctcatcgagtccgtgtccttgggccaggtgcgcagagtgcgtgtaggtcatgatggc
agcggtggaggttgtggttggtttgttgataaggtgttggtcagagaggagggccaacca
gagagtttggccattgagttcccctgttataggtggttggaccgtaatgaggacgatggg
cagattgtccgcgagttagttccagctggagatggcctgcgtcttttcaatgtcagctac
cacgtagcaatcaagacgggcagtgtgaatggggccagctccgactccaaggtgtttgtc
aagctgtacggagagaagtgtgacaccaacaagatgattctggcggtcagtgacaatgat
ctcaggaactactttgagacaggacgcactgacatttttaccattgaaacctttgacgtt
ggacagatcagccgtttcctgattggtcacaccaacgagggcctgcgggctggatggttt
ctggacagtgtgaagatttctgtgccagttcatgggaaggagtacatgttcccgagccac
cgctggctctgcaaggacgaggctgatggcaaagtggaggtggagatctatccgagcgag
gtcctggatattgaacaattgatcaactatgaagtaacagtggtaacaggggatgtgcgt
acagctggcaccaatgccaatgtcttctgtcaaatgtatggagaggaaggaaaaactgaa
gttcttcctctaaagaatcgctccaacaactttgaacgcggcaccactgagatcttcaag
attgaggctctggatattggtaagatctacaagatacgcatctgccatgacggtaagggt
gttggggacggttggttcctggataaagtggacatcaagcggctgacggtggctatggtg
cagattgaggtgaagaaggaggacaccaagaaagacaagaagaaggacaaaaaaaagaag
aagaaagaggacgaggtagagatagttgaggagctgcaggaagtggtgaagacattctct
ttcccctgcaaccgctggttggccagggatgaggaggacggggagattgtggttgagctg
ctgactgaggacgatgaagatctcgaggtgaactcgtatgaggtccatgtgttcactggg
actatgtggggagcggggacagatgccaatgtttacatcaacatttatggagagataggc
gacacaggggagagacggctcaggaagtcaaaccacctgaacaaatttgagaaaggccag
gaggacattttcaacatcacggccgtcgacctgggggccctgaagaaactgaggatccga
catgaccacagtcaggccagtgccggttggtttttggaaagagtggagatcatagacaac
aaagatgacactacatactttttcccttgcaagcgctggctggctattgatgaggatgac
aaacagcttgccagggagctggttcctgtggatgaggcctttatgaagaagggcgatgat
gatgatgaggactctgacgctgcactcggtctggaacagaaagccatgtcaacaacatac
acagtgaagataaaaactggtgacaaaaagtacgcaggaactgacgcaaatgtttttatg
atcctgtacggcaccaaggatgacacagggataattaacctgaaggcttctaagactaat
aagaacaagtttgagcggggattgattgacgagttcaccgtggaagcagtggacattgga
ccactgaagaagctgcgtattggacacaacaacagtggaggaggatcaggctggttcgtt
gactgggtggagattgatgctccttctctggggcagaaactgcgcttcccctgcggccgc
tggttggataaaggggaggatgacggggccattgccagggaccttttccctaatccccta
cagacagagctttacacaccatttgttccttatgagattaaaatcttcacgagtgacgtg
tttggagcaggcacagatgcagatgtcttcatcgtcctgtacgggcgggatgcggtgtgc
agccatcagaagtctctgtgtgtcaacaagagggagaggaggatgtactttaaacgagga
gctgaggacatgtttattgttgagctaaaagacgtgggggatgtaattgagaagatccgt
atcggccatgacaaccgtggggtcaacccaggctggcatttggacagagtggagatcaga
cgtctgctcaggaagggaaagggttcagagactgtgatcttcccgtgtgagtgctggctc
gccaagtcggaggatgacagagaaacagtgagagagctggtgccctctgacatcatcact
gagaaactttcacgagatggaagcctgaaagtcactgaaatcgaggtggaagacgccctg
gagactcacacatacacggtgtcagtaatgacaggagatgtgtacggagccggcaccgac
gccaatgtcttcctcacgatctacggagacatgggggacactggagagaggaaacttagc
aagtcggagacaaaccgcaacaagtttgaacgaggatctgtggatgagttcactatagag
gcagtcgacctcgggcaggtttttaagattaaaatccgccatgataacagtatgataagt
gcagactggtacttggaccaagtggaggtggttgatgtggatacagaagaggtcttcatc
ttcttatgtgaacgatggctttccaggaagagagaggacggacgcattgagagattcttc
tatgtcaaggattatgagggagtgagagaaagcttaaacagtaaaaagaactcagccctg
atggtgaagagtgttgacagcaacatgaacaaaaagaacaagaagaagaaggaggaagaa
atggagctcccgatcataccataccacattaccatctgtactggactggagcgagatgcg
ggcactaccagcagggcttatgtgatcattatcggggccaatcacacccagacagagagg
ttatggctggacctgctggatgggaggaagggctttgaggctggctctctggagaacttt
gagacctacggttcagatttgggggagatcaaaaaggtcgagctcggccatgatggggcc
acttctgagagctgctggctggttgatgagctgtctgttgctgtgccaaccaaaggggtc
acatacgtctttgcctgcaaatgctggctggccaaagatcgtggagatgggttaactgct
agagtcttcaacgtgctggatgcagaggccatttccatctcccagaagattatctatgag
gtgacggtggtaacgggagatgttcagaacgcaggaacagacactcagattttcatgtct
gtgtttggggccaacggcagcacagaggagatgctcctgcagaagaatgaggacaggttt
gagcgtggtcaggaggacactttcaccatggagatcgatgacattgccccactgaggaag
atgaggcttcgcattgatggctctggcagtcgacctgactggtttttcaatcaggtgatc
atgcgtaaccttaccacagaggaggtgtccgtgttcacctacgaggactggttgtccagg
atgcgtggacccaaaagaaccatgatctgcgagatggctgctgtggtagacgaggaaaca
atggtggagctcaccacctacatcatccaggtcaagaccagtgatgttactggggcaggc
actgatgccaatgtgtgggtcatcattttcggagagaacggagacacggggacgctggcg
ttgaaagagtgcaacaagtccaacaagtttgagcgcaagcagaccgacacatttcacttc
tcagacatcctcagcatgggcgagctctccaaagtgcgagtttggcacgacaacacaggt
cctgctcctggatggcacttagaatacattgatgtgaaggatgagatcatggacaaaaca
tttcggttcccctgtgaccgctggcttgcaaaaaatgacgatgatggacagataatgaga
gaactggcctgcgctaacaatgactacttagacttgaatgagaagacaaagtatgaaatt
tgtatcacaactggagacactgagaccaaagaaaatggctggattgtacttgaggggagg
aagggccgatcaaaagaatttgtaatggagaactcctctaagaagaggaggttcttgcgg
ggaaatgtggacaggtttgagttttcatccaagaacctgggtgacatcgcaggtatctgc
ctgggccacacacccaaggacggaaagaaagtgaagggggagtttcactggcatgtagtg
gaggttgccgtcactgaaagagagctgggaaacaagtacatcttcagctgcaatgccctc
atccctctctcttcaaaaagggatgaattcttgacctttgagtgcgcaaagaccatcgag
agcttcgccagtaaagctagaagcctggtgcctgtcaagtacgagatcatcgtcatcacc
ggcgacgagaagggagcaggtacagatgccaacgttttcatcactatctatggctccaat
ggagattcaggccgccgacagttgcggcagaagttccgcaacctttttgaacgtgagcag
acggatcgtttcctggtggaaatgctggacatgggagagctgcagaaagttcgggtggag
cacgacaacacgggtcttagtcctggctggctactggatcgtgtggaagtcaccaacaca
gctaatggtgtcacaaccatcttcctgtgcaggaagtggctggacactaaattggctgat
gggcagatcgtcagagtcatttatccaaaatactaa
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integrated database retrieval system
