Scomber scombrus (Atlantic mackerel): 133995774
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Entry
133995774 CDS
T10651
Symbol
nedd4l
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like isoform X1
KO
K13305
E3 ubiquitin-protein ligase NEDD4-like [EC:
2.3.2.26
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04120
Ubiquitin mediated proteolysis
ssco04144
Endocytosis
ssco04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133995774 (nedd4l)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133995774 (nedd4l)
09144 Cellular community - eukaryotes
04530 Tight junction
133995774 (nedd4l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133995774 (nedd4l)
04121 Ubiquitin system [BR:
ssco04121
]
133995774 (nedd4l)
Enzymes [BR:
ssco01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
133995774 (nedd4l)
Membrane trafficking [BR:
ssco04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
133995774 (nedd4l)
Ubiquitin system [BR:
ssco04121
]
Ubiquitin ligases (E3)
HECT type E3
133995774 (nedd4l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
MUG113
Motif
Other DBs
NCBI-GeneID:
133995774
NCBI-ProteinID:
XP_062291236
LinkDB
All DBs
Position
15:complement(11762243..11810380)
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AA seq
1013 aa
AA seq
DB search
MATNYEPIYGLSEDENETRVLRVKVIAGIDLAKKDIIGASDPYVKLSLYVADENRELALV
QTKTIKKTLNPKWNEEFYFRVCPQNHRLLFEVFDENRLASTKNGLFHLGQTRDDFLGQVD
VPLSHLPTEDPTMERPYTFKDFLLRPRSHKSRVKGYLRLKMAYLPKQGGPEEEAGEMREE
AEGWDENADSGSQRPQQLLPPLPPGWEEKVDNLGRTYFVNHNNRSTQWKRPSNMDVISET
ESDNQQRQIHQEAHRVFRSRRHISEDLENEHLEPRDIDNSWELITEEDPNDSLAQSLPGP
SSVMTPQHPSTPVTQEFSEDLNLRLSLTPDTNGEVPGPSSALGQMSNRLRSSSMTDGVSD
QTQAPPLTSSQTRRTRAQTVSGGEEPMSPSATAYTLTTPGLPPGWEERKDGKGRTYYVNH
NSRTTTWTRPIVQLTEDGASTSAAAAAAAASGGASALPSASTPSSSSNASSNHLHEPQVR
RPRSLSSPTVTLSTPLEGANNIQVRRAVKDTFSNPQSPQPSPYSSPKSQHKAQQSFLPPG
WEMRIAPNGRPFFIDHNSRNTTWEDPRLKYPVHLRNKNSMEPGELGPLPPGWEERVHSDG
RTFYIDHNTKNTQWEDPRLQSPAITGPAVPYSREFKQKYDYFRKKLKKPADIPNRFEMKL
HRNNIFEESYRRIMSLKRPDVLKARLWIEFESEKGLDYGGVAREWFFLLSKEMFNPYYGL
FEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVFHGKLLDGFFIRPFYKMMLGK
QISLKDMESVDSEYYNSLKWILENDPTELDLRFCIDEDNFGQTYQVDLKPSGSDMVVTNE
NKKEYIDLVIQWRFVNRVQKQMNAFLEGFTELILIDLIKIFDENELELLMCGLGDVDVND
WRQHTVYKNGYCPNHPVIQWFWKVVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGP
QLFTIEQWGTPDKLPRAHTCFNRLDLPTYESFEDLREKLLMAVENAQGFEGVD
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atggctacgaattacgagccaatatatggactttcagaagatgagaatgaaaccagagtg
ttgcgggttaaggtcattgcaggaattgatttggcgaagaaagacatcattggagccagc
gacccttacgtcaagctttccctttatgttgcggatgaaaacagagagctcgccttagtc
caaacaaagactattaaaaagaccctcaatcccaaatggaacgaggaattctacttcaga
gtctgtccgcagaatcacaggctactctttgaggtgtttgatgaaaacagattggcttca
accaagaatgggcttttccatctcggacagaccagagatgatttcctgggacaagttgat
gttcctctcagtcatttgccgacagaggaccctaccatggagcgtccctacacatttaag
gacttcctcttacggcccagaagtcacaaatccagggtgaagggttacctgcgtctgaag
atggcctatctgcccaaacaaggaggacccgaggaggaagctggagagatgagggaggag
gctgagggatgggatgagaatgcagactcagggtctcagcgaccccagcagctgctgcca
ccattgcccccaggttgggaagagaaggtggacaacctgggacgcacctactttgtcaac
cacaacaaccgctctacacaatggaaacggccctccaacatggatgtgatttcagagaca
gagagtgacaatcaacagcggcagatccatcaggaagcacaccgtgttttccgttctaga
cgccacatcagtgaagatctagagaacgagcacctggagcccagggacattgacaactcc
tgggagctcatcacagaagaggatcctaacgacagcttggcccagtcactgcctggcccc
tcctccgtcatgacgccacagcacccaagcacacccgtcacccaggagttctccgaagat
ttgaatctgaggctgtcacttacacccgacactaatggcgaagtgccagggcccagctct
gctctgggccaaatgtcaaacagactccgttcctccagtatgacagatggcgtcagtgat
cagacccaggctcctcctctcacgagttcccagaccagaagaacgagagctcaaacagtc
tcaggtggtgaggagcctatgtctccctcagcgactgcttacaccttgaccacccctggc
ctgccccctggatgggaagagaggaaggacggcaagggaagaacttattacgtcaaccat
aacagccgcaccactacctggactaggccaattgtgcagctgactgaagatggagccagc
acctcagcagcagcagcagcagcagcagcatcaggaggagcctcggccctgccatccgca
tccaccccttcctcctcttccaatgcttccagcaaccacctccatgagccccaagtccga
cgacctcgtagcctcagctcccctactgtcaccctttccacccccttggagggagccaac
aacatccaggtgcggagggctgtgaaggacacgttctccaacccccagtctccccaacct
tccccctacagttcccccaagtcacagcacaaggcacagcagagcttcctgcctccaggc
tgggagatgaggatagctcctaacggacggcctttcttcatcgaccacaacagcagaaac
accacctgggaggatcctaggttgaaatatccagtccatttgaggaataagaactcaatg
gagcctggtgaacttggtcctcttcctcctggctgggaagaaagagttcactcggacgga
cgcaccttttacatcgaccacaatacaaagaacacgcagtgggaagaccctcgtctacag
agtccagctatcacaggacctgcggttccttactccagagagttcaagcagaaatatgac
tacttcaggaagaaattgaagaaaccggctgacatccccaaccgattcgagatgaaacta
cacaggaacaacatcttcgaggagtcttatcgtcgaatcatgtccttgaaaaggccggat
gttctgaaggcgcggctgtggatcgagtttgagtcagagaaaggactggactacggtggc
gtggctagggaatggttcttcctcttatcaaaggaaatgttcaatccttactacggcctg
tttgaatactcagccacagacaactacactctccagataaatcccaactccggcctgtgc
aatgaggatcacctctcctatttcaagttcatcgggcgtgttgcagggatggccgtgttt
catggaaaactactggatggttttttcatccggcccttctacaaaatgatgctgggaaaa
caaatctctcttaaagacatggagtctgtggatagtgaatactacaactctctcaaatgg
attctggagaatgatcccactgagctggacctgaggttttgtattgatgaggacaacttt
ggacagacgtaccaggttgatcttaagcccagtggctcggatatggtggtcaccaacgag
aacaaaaaagaatacatagacctggtcatccagtggaggtttgtcaatcgggtccagaag
cagatgaacgccttcttggagggcttcactgagctcattctcatagatctgatcaagatc
tttgatgaaaacgaactggagctgctgatgtgtggtctgggtgatgtcgatgtcaacgac
tggagacaacacactgtttacaagaacggctactgccccaaccatcctgttattcagtgg
ttctggaaggttgtcctgttgatggatgctgaaaagaggatccgactcctgcagttcgtc
acaggaacgtcacgagtccccatgaacggcttcgctgagctttatggttctaatggtcct
cagctgttcacaatcgagcaatggggaacacctgataagttgccaagagctcacacatgt
ttcaaccgcttggatcttccaacctatgaatcctttgaggacctgagagagaaactcctc
atggccgtggagaacgcacagggcttcgaaggggttgactaa
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