Scomber scombrus (Atlantic mackerel): 133995792
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Entry
133995792 CDS
T10651
Symbol
lrrc8aa
Name
(RefSeq) leucine rich repeat containing 8 VRAC subunit Aa
KO
K22038
volume-regulated anion channel
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssco04040
]
133995792 (lrrc8aa)
Ion channels [BR:
ssco04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
133995792 (lrrc8aa)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_5
LRR_1
LRR_At5g56370
LRR_LRWD1
Sp-CxC
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
133995792
NCBI-ProteinID:
XP_062291267
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Position
15:10117097..10139523
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AA seq
796 aa
AA seq
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MIPITELRYFADTQPAYRILKPWWDVFTDYISIVMLMIAVFGGTLQVTQDKMICLPCKWV
INRSCETMPVPNVTVPFAPEPKGIQYDLDRHQYNYVDAVCYENKLHWFAKYFPYLVLLHT
LIFLACSNFWFKFPRTSSKLEHFVSILLKCFDSPWTTRALSETVVEESDSKPLGKMNGSM
DKKASCVSEDVEASVPMLQRTKSRIEQGIVDRSETGVLDKKEGEQAKALFEKVKKFRIHV
EEGDIVYRLYIRQTIIKVIKFILIISYTGYYVSYIRFSVVCAVEIQNLTGYSTFYCAHPL
ATLFKILACFYISLVVVYGLICMYTLCWMLSRSLKRYSFESIREESSYSDIPDLKNDFAF
MLHMIDQYDPLYSKRFAVFLSEVSENKLRQLNLNNEWTLEKLRQRITKNSQDKLELHLFM
LSGIPDTVFDLLELEVLKLELIPDVTIPPIIAQLSNLREMWLYHTPAKIEAPALAFLREN
LKSLHIKFTDIKEIPLWIYSLKNLSELHLTGNLSAENNRFIVIDGLRELKRLKVLRLKSN
LTKLPQVVTDVGVHLQKLSINNEGTKLMVLNSLKKMVNLTELELVRCDLERIPHSIFSLH
NLQEIDLKDNNLKTIEEIISFQHLHRLVCLKLWYNQIAYIPIQIGTLTNMERLYLNRNKI
EKIPSQLFFCRKLRFLDLSHNNLTNIHADIGFLQNLQYFAVTANRIETLPPELFQCKKLR
TLNLGNNCLQTLPSRFGELTGLTQLELRGNRLECLPVELGECRLLKRSSLVVEEDLFNTL
PTEVKEQLWRADKEQA
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgattcctatcacagagctccggtactttgctgacacccagccagcgtaccgtatcctg
aagccatggtgggacgtattcaccgactacatctcgatcgtcatgctgatgatcgcagtg
tttggcggcacactgcaggtcacgcaggacaagatgatctgcctgccttgtaagtgggtg
atcaacaggtcgtgcgagaccatgcccgtcccgaacgtgactgtcccctttgcaccggaa
cccaaaggcattcagtatgacctcgaccgtcatcagtataattatgtcgacgctgtttgc
tacgaaaacaaactacactggtttgccaaatatttcccctatctggtgctactccacact
cttatctttctggcctgcagcaacttctggttcaagttcccacgcacaagctccaaactg
gaacactttgtctccatcctcctcaaatgttttgattccccatggacaacaagggctctg
tccgagaccgtggtcgaggagagcgactccaaacctttggggaaaatgaacggttcaatg
gacaagaaggcctcttgtgtgagcgaggatgttgaggcgagtgtgcccatgctccaaaga
acaaagtccagaattgaacaaggaattgtagatcgctctgaaactggggttttagataaa
aaggaaggggagcaggccaaggctctttttgagaaggtgaagaagttcaggattcatgtg
gaggagggtgatatagtgtaccgtctctacatccgtcagaccatcatcaaagtaatcaag
tttatactgatcattagctatacagggtactatgtaagctacatcaggttcagtgtagtg
tgtgcggtggagattcagaatctgacaggatacagcacgttctattgcgctcacccgtta
gcaactcttttcaagattctggcctgtttctacatcagcttggtggtggtttatggtctt
atctgcatgtacactctttgttggatgctcagccgctcactcaaacgatactcctttgag
tcaatccgcgaggagagcagctacagcgacatccctgatttaaagaacgactttgccttc
atgctgcacatgatagatcagtatgaccctctctactccaagcgctttgctgtgtttctg
tcagaggtgagcgagaacaagctgaggcagctgaatctcaacaacgagtggacgttggag
aagctgaggcagcgcatcaccaagaactcgcaggataagctggagctgcatctgttcatg
ctcagcggaatcccagacacagtgtttgatctgctagagctggaagtgctcaagctggag
cttattcctgatgtcacaatccctccgatcatcgctcagctttcaaacctgagggaaatg
tggctctaccacacaccagctaaaattgaggctccagctctggctttcctgagggagaac
ctgaagtcgctccacattaagttcacagacataaaagagatcccactgtggatctacagc
ctgaagaacctcagtgagctccacctcactgggaacctgagtgcggagaacaatcgcttc
atcgtcatcgacgggctccgagagctcaaaaggctcaaagtgctgcgtctgaaaagcaac
ctgaccaagctgccgcaggtggtgacagacgtgggcgtgcacctccagaagctttctatc
aataacgagggcactaaactgatggtgctcaacagcctgaagaagatggtcaatctgacg
gagctcgagcttgttcgctgcgatctcgaacgcatcccacactccatctttagtttgcac
aacctgcaggagatcgacctgaaggacaacaacctgaagacgatcgaggagatcatcagc
ttccagcacctgcaccggcttgtgtgcctgaagctgtggtacaaccagatcgcttacatc
cccattcagatcggcacgcttaccaacatggagcggctatatctgaacaggaacaagatc
gagaaaatccccagccagcttttcttctgtcgcaaactgcgcttcttagacctgagtcac
aacaatctgaccaacatccacgctgacataggcttcctccagaacctgcagtatttcgct
gtgacggcaaacaggattgagactttgcccccagagctgttccagtgtaagaagctgcgc
actctgaatctgggtaacaactgcctgcagacgctaccatcgcgcttcggggagctcacc
gggctgacccagctggagctgagagggaaccgtctggagtgtctcccggtggagctgggc
gagtgtcggctgttgaagaggagcagcctggtggtggaggaggacctgttcaacacgctg
ccaacagaagtgaaagagcagctttggagggccgataaggagcaagcttga
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