Scomber scombrus (Atlantic mackerel): 133995799
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Entry
133995799 CDS
T10651
Symbol
si:dkey-34e4.1
Name
(RefSeq) carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein
KO
K16513
carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133995799 (si:dkey-34e4.1)
Membrane trafficking [BR:
ssco04131
]
Endocytosis
Clathrin-mediated endocytosis
LDLR adaptor proteins
133995799 (si:dkey-34e4.1)
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Gene cluster
GFIT
Motif
Pfam:
PID
DUF4628
Motif
Other DBs
NCBI-GeneID:
133995799
NCBI-ProteinID:
XP_062291274
LinkDB
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Position
15:9571817..9628650
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AA seq
670 aa
AA seq
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MPARNRYNLVDDVGDSRVPLHNEEAYQHGISFQAKYVGCLDVPRPNSRMEIVAAMRRIRY
EFKAKNIKKKKVSIVVSVDGVKVILRKKQKRKEWTWDESKLLVMHDPIYRIFYVSHDSQD
LKIFSYIARDGSNNSFRCNVFKSKKKTQAMRIVRTIGQAFEVCHKLSLQHAEQDADGQAD
GESDNSTEEPSSNARKLTGAEREEEEGKQEGRHGGEEPSAGGTSLCEKAVSEILQSLAEL
NVVKPGQTIIDFDRRSLFTVISQGITPSSPCSPSVTPLASQHYLQLLQQQLQQQQQHTQV
AVAQVQLLKDQMAAESAARMEAQARVHQLLLQNRDLLQHLALLVQQLKELEDRCPKSLQP
GQPQPEPQANGHNGQQSPCSSVSTSVKALSLNLKSHYSQNPDQLITSTPAWPLQTSPLSP
SQVDCAESYLNLLNLENSTKPAASVNGDLDPFITANGVADNKESSCNEVVPFTSRNSASL
DEKCNQTIPKLDPPPPSMNRKRASRTLSPGSDFTSVPMPGEVITNDGAPSRSSSLSFPDI
TPSSLSSSDFHSLSNGESSSCSASEDSGVRSETKSLLSPLRDDDDLFGDRGTFLTASSGC
DSPLEETTEAVLSPTESYPTEPQILSSHSDTNEHQLPFSSPLNDTCLHISFSEEELLENS
QEDPNVPQRS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctaggaacaggtacaacctggtggatgatgtgggggactcgagggtgccgctc
cacaatgaggaggcttaccagcacgggatttctttccaagccaagtatgttggatgtctg
gacgtgcccaggcccaacagccggatggaaatcgtggcagccatgaggaggatcaggtat
gaattcaaggccaagaacatcaagaaaaagaaggtcagcattgttgtgtctgtggatggc
gtcaaggtgattctgaggaagaaacagaagagaaaagaatggacgtgggatgagagcaag
ctgctggtcatgcatgatcccatttacaggattttctacgtgtctcatgactcccaggac
ttaaagatcttcagctacatcgcaagagatgggagcaacaattccttcaggtgtaatgtc
ttcaaatccaagaagaagacgcaggccatgcgtatagtgcggacaataggtcaggccttt
gaggtgtgtcataagctcagcctgcagcatgcagagcaggatgcagacggacaggctgat
ggagagagtgacaattccacagaggagcccagcagtaatgctcgtaaactgacaggagca
gagcgagaggaggaggaaggcaaacaagaaggaagacatggaggagaagagccgtcagcc
ggaggcacctcactgtgtgaaaaggcagtcagtgaaattctccagagtctggctgaactg
aacgtggttaaacctggacagaccatcatagactttgatcgaaggtccctcttcactgtg
atatcccaaggcattactcccagcagcccttgctctccgtctgttactccgctggcatcg
cagcactacctgcagcttcttcagcagcaactgcagcagcaacagcagcacacgcaggtg
gccgtcgcacaggtgcagctgctgaaagatcagatggcagcagagtcggctgctcgtatg
gaggctcaggcccgtgtccatcagctgctgctgcagaacagggacttactgcagcacctg
gccctactcgtgcagcagctgaaagagctggaggaccgatgcccaaaatcattacaacca
gggcagccacaaccggagcctcaagctaatggacacaacggccaacagtctccttgcagt
tcagtttctacatcagtgaaggctctgtctctgaatctgaagagtcactacagccagaac
ccagaccagctcatcacctccacgcctgcatggccgctccaaacttcacccctctccccc
agccaggtggactgtgctgagtcctacctgaacctgctcaacctggaaaacagcaccaaa
ccggctgcctcggtcaacggagacctggaccccttcatcacggccaacggggtagctgat
aacaaggagagctcctgcaatgaggttgtcccgttcacgtcgagaaactccgccagcctg
gatgaaaagtgtaatcagacaattcccaaactcgaccctcctccaccctccatgaaccgc
aagcgggccagcaggaccttgtctccagggtcagacttcacatcagtgcccatgcctgga
gaggtcatcactaatgatggggcccccagccgcagcagcagcctctcgttcccagatatc
acccccagctcgctgtcgtccagtgatttccactccctcagcaacggcgagagcagctcc
tgttcggccagcgaggactcgggcgtccgctccgagaccaagtccctgctgtcgcccttg
cgtgatgacgatgacctgttcggggaccgcgggacatttctaacagcttccagtggctgt
gacagtcccctggaggagacaaccgaagcggttctctctcccactgagtcatatcccacc
gagccccaaatcctctcctcacattcagacacgaatgagcaccaactgcccttctcatct
cctttgaatgatacctgccttcacatcagcttttctgaggaagagctgctggagaacagc
caggaagaccctaatgtcccacagcgaagttag
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