Scomber scombrus (Atlantic mackerel): 133995832
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Entry
133995832 CDS
T10651
Symbol
srsf4
Name
(RefSeq) serine/arginine-rich splicing factor 4 isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco03040
Spliceosome
ssco05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133995832 (srsf4)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133995832 (srsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ssco03041
]
133995832 (srsf4)
Spliceosome [BR:
ssco03041
]
Common components
Common spliceosomal components
SR proteins
133995832 (srsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
133995832
NCBI-ProteinID:
XP_062291292
LinkDB
All DBs
Position
16:10051205..10058099
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AA seq
423 aa
AA seq
DB search
MSRVYIGRLSYRAREKDVERFFKGYGKILEVDLKNGYGFVEFDDPRDADDAVYDLNGKEL
CGERVIVEHTKGPRRDGGYGGRSGYGRWGRDRYGPPIRTDYRLIVENLSSRCSWQDLKDY
MRQAGEVTYADTHKGRRNEGVIEFRLYSDMKRALEKLDGTEVNGRKIRLIEDRPGAKRRR
SYSRSRSRSRSRSRSRRSRKSRSRSESSSRSRSHSRAASRSRSRSRSKKNKGGKNKKEEE
ERSNGAQKGKDRSRSRSPKSRSPKSRSPKSRSPKNRSRSRSPKSRSPKSRSPKSRSPKSR
SPKSKKSKKEGKKTKKDDSRSRSRSRSRSRSRSGIKDRSRKSGSKGRDPPKSDDEGGEPE
RGSRSRSRSPAESKSRARSKSKSKSKSHSPSPVKARSRSRSASRSESRSKSRSQSRSRSR
SRS
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagggtgtatatcggtaggctgagctaccgggcgagagagaaggacgtggagcgg
ttcttcaaaggctacgggaagatcctggaggtcgacctgaagaacgggtatgggtttgtt
gaatttgacgacccccgtgacgcagacgatgcggtctatgacctgaacgggaaagagttg
tgcggggaaagggtcattgtggagcacacgaagggacctcgtcgcgacggaggctatggc
ggaaggagtggatatggacgttggggacgagacagatacggtccaccgataaggacagat
tatcggctcattgttgagaatctttccagccgctgcagctggcaggacctgaaggactac
atgaggcaggcgggggaggtgacttacgctgacactcacaagggacgcaggaatgaaggg
gtgatcgagttcaggctctactctgatatgaagagggctctggagaagctggacggcaca
gaggtgaatggcagaaagatccggctcattgaggaccggcctggtgccaaacgccgtcgt
tcttactctcgcagccgcagccgttccaggtcccgctccaggagccgcaggtctcgcaag
agccgcagccgtagcgagagcagcagccgcagccgctcccactccagagcggcttcacgt
tctcgcagccgatcccgtagcaagaagaataagggcggcaagaacaagaaggaggaagag
gagcgcagcaacggagctcagaagggcaaggaccgcagcaggagccgcagccccaagagc
cgcagccccaagagccgcagccccaagagccgcagccccaagaaccgcagcaggagccgc
agccccaagagccgcagccccaagagccgtagccccaagagccgcagccccaagagccgc
agccccaagagcaaaaagagcaagaaagaagggaagaagaccaagaaggacgattccagg
tccagatctcgctctcgctccaggtctcgttctagatcggggattaaggatcgctccagg
aaatctggttcaaagggccgcgacccgcccaaaagcgacgacgagggaggcgagccggaa
aggggctctcgctcccgttcccgctcccccgctgaatccaaatccagagcgaggtctaaa
tcaaagtccaaatctaaatcccattccccttcaccagtcaaagcccgatcccgatcccga
tccgcctcccgttcagagtcccgctccaaatcccgctcccaatctcgctcccgctcccgt
tctcgctcctag
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