Scomber scombrus (Atlantic mackerel): 133995849
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Entry
133995849 CDS
T10651
Symbol
abcf1
Name
(RefSeq) ATP-binding cassette sub-family F member 1 isoform X1
KO
K06184
ATP-binding cassette, subfamily F, member 1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
ssco03012
]
133995849 (abcf1)
Translation factors [BR:
ssco03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
133995849 (abcf1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_14
AAA_28
AAA_22
AAA
NACHT
AAA_15
ABC_tran_Xtn
AAA_16
AAA_24
AAA_5
RsgA_GTPase
MMR_HSR1
AAA_19
AAA_18
AAA_25
cobW
ATP-synt_ab
AAA_23
Motif
Other DBs
NCBI-GeneID:
133995849
NCBI-ProteinID:
XP_062291330
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All DBs
Position
16:28925263..28956699
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AA seq
848 aa
AA seq
DB search
MPKKVKEEAEWVGDEVSPAAAEKTVKKGKKDKKGKKSFFEELATDSKPEKAVEVAVKDTQ
GKQPQKKKKDRRKGKGGDADEDDDEDVMLKLKKLSVQASDEEDEPVVAPSKGNKKNKGGN
IFAALSQEQSDEDEDSDLEEEEIKKEVEKGKKKDKSKSKKVKAVSDEEDEAEQDDEKKHA
KKAEAKLSKSSEYDEVENPKKGKKDQRKKGKPAERSISEDEDEEENSDGGDMMMSAEDVI
AEQAKQQEDDPFANMSKKEKKKKKKLMEYERQVASVRAQNALEGDFSISQAEMSSRQAML
ENASDIKLERFSISAHGKELFVNADLLIVAGRRYGLVGPNGKGKTTLLKHIANRALSIPP
NIDVLLCEQEVVADDTPAVQAVLKADTRRLKLLEEERQLQTRLEKGEDNVAERLEKVYEE
LRAIGAAAAEAKARRILAGLSFTPEMQNRPTKRFSGGWRMRVSLARALFMEPTLLMLDEP
TNHLDLNAVIWLNNYLQGWKKTLLIVSHDQSFLDEVCTDIIHLDNQKLYYYRGNYLTFKK
MYVQKQKELQKQYDKQEKKLKDLKAGGKSTKQAEKQTKEALTRKQQKGKKKGAQEEESQD
ATELLKRPKEYTVKFTFPNPPPLSPPILGLHSVDFCYESQKPLFKNVDFGIDMESRICIV
GPNGVGKSTLLLLLTGKLNPTKGEMRKNHRLKVGFFNQQYADQLNMEETATEYLMRNFNL
PYQDGRKCLGRFGLESHAHTIQISKLSGGQKARVVFAELACRQPDVLILDEPTNNLDIES
IDALSEAINEYKGAVIIVSHDARLITETQCQMSVVEDCTINQIDGDFDDYKREVLEALGE
TMINKVNP
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaaaagtgaaagaagaagcagagtgggtgggcgatgaagtctccccggcagca
gcagaaaagacagtgaagaaggggaagaaagataaaaaggggaaaaagagtttctttgag
gagctcgccacagatagcaaacctgagaaggcagttgaggtggctgtgaaagacacacaa
ggaaaacagcctcagaaaaagaagaaagaccgtcggaaaggaaaaggtggagatgcagat
gaggatgacgatgaggacgtcatgctgaagctgaagaagctctctgtgcaagccagtgac
gaggaagatgagccagtcgtcgcccccagcaaaggaaacaaaaagaataagggtggaaac
atctttgctgctctcagccaggagcagagtgatgaggatgaggactctgatttggaagag
gaagaaataaaaaaggaggttgagaagggcaagaaaaaagataaatctaaatccaagaaa
gtgaaggctgtatctgatgaggaggatgaggcagaacaggatgatgaaaagaaacatgca
aagaaagcagaagccaagctgtccaagtcatcagagtatgatgaggtcgaaaatccaaag
aaggggaagaaagaccaacggaagaagggaaaaccagctgagcgctctatcagtgaggat
gaagatgaggaggagaatagtgatggaggtgacatgatgatgagtgctgaggatgtcatc
gcagagcaggctaagcaacaggaggatgacccatttgctaacatgagtaaaaaggagaag
aagaagaagaagaaactgatggagtatgagcgtcaggtggccagtgttcgtgctcagaat
gccttggagggagatttctccatttcccaggctgagatgtcctccagacaggccatgctg
gagaatgcctctgacatcaagctggagaggttcagcatatctgcccatggcaaggagctt
tttgtcaacgctgaccttctgattgtggcaggaagaagatatggtttggtgggaccaaat
ggcaaaggaaagaccacattactgaaacacatagcaaacagagctctcagtattcccccc
aacattgatgtgctgctgtgtgaacaggaggtggtagctgatgacacaccagcagtgcag
gcggtgctaaaggcagacacccgccgtctgaagctgctggaggaggaaaggcagctccaa
actcgtctggagaagggagaggacaatgtggctgagagactagagaaggtctatgaagag
ctgagggccattggagctgcagcagctgaggcgaaggcccgaaggatcttggctggtctg
tcatttacccccgagatgcagaacagacccactaagaggttctccggaggttggagaatg
agagtctccctcgccagagctctgttcatggaacccactctcttgatgctggacgaaccc
accaaccacttggacctgaatgctgtcatctggctcaacaactaccttcaaggctggaag
aaaactcttctcatagtttcccacgaccagagtttccttgatgaagtgtgtacagatata
atccacttagacaaccagaaactctactattacagagggaactacttgaccttcaagaag
atgtatgtgcagaaacaaaaagaactccagaaacaatacgacaaacaggagaagaaactt
aaggatttgaaggctggtggcaagtccaccaaacaggctgagaagcagactaaggaggcc
ctgaccagaaagcaacagaaaggcaagaagaagggagctcaggaggaggagagccaggat
gccacagagctgctaaagaggcctaaagagtacacagtcaagttcacctttcccaaccct
ccacctctctctccacctatactaggactacacagtgttgatttttgctacgagagtcag
aaacctctcttcaagaatgtggactttggaattgacatggagtctaggatttgcatagta
ggacccaatggtgttgggaagagtaccctgctgctactgctcactgggaaattaaatcct
actaaaggagagatgagaaagaatcatcgtttgaaagtgggctttttcaaccagcagtat
gctgatcagttgaacatggaggagacggccacagagtatctgatgaggaacttcaacctt
ccctaccaggacggcaggaagtgcctgggacgttttggactggagagccacgcacacacc
attcagatctccaaactgtcaggtggtcagaaggccagagtagtgtttgctgaacttgcc
tgtcgtcagcctgatgttctgatcctggatgaacccactaataatctggacattgagtcc
attgatgctttatcagaggccatcaatgaatataaaggagctgtgatcattgtgagtcac
gatgctcggctcatcacagagactcagtgccagatgtcggtggtggaggattgtactatt
aaccagattgatggagactttgatgactacaaacgggaagtattggaggccctaggagag
accatgatcaacaaggtcaacccatga
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