Scomber scombrus (Atlantic mackerel): 133995948
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Entry
133995948 CDS
T10651
Symbol
irx4b
Name
(RefSeq) iroquois-class homeodomain protein IRX-4b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssco03000
]
133995948 (irx4b)
Transcription factors [BR:
ssco03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
133995948 (irx4b)
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
133995948
NCBI-ProteinID:
XP_062291441
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Position
16:21869901..21872664
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AA seq
411 aa
AA seq
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MAYSQLGYSYSTTPQFLMGSSPLSGCLEPGTTASHPVLRSPGHQLTTGTGIGVYSGPYPK
SQGYYNTCTSDATALYSRGPLEPKDRAASVHVGTSQTPAYYPYDYTFGQYPYDRYGYSSS
DGASRRKNATRETTGTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRL
KKENKVTWSPRACKSSDDRGCDDDSDEAEKPLKNDKELPDQPCADLQSDLEDFDLLESDA
SDCEPKPQFLPEDNDANPSTNIPHGHLIHNPDSLHGTERLTPDCPKLTSVQDQNSAFYPN
PDVRNSDTKPKIWSIAHTAVSLDPSLQLEYPPCMLSSTRSSSPGYPSNMALTKVDTEQDS
PVTTLREWVDGVFHGPPFQQPKPATLWKGLNEAMIESRTPGQSFVRSTTSL
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcttactctcagttgggatactcctactccactacaccgcagtttctgatgggctcc
agccccctgtccggttgtctggagccaggaacgactgcgtcccacccggtgcttcgctcc
ccgggccaccagctcaccactggcaccggcatcggtgtctacagcggcccttatccaaag
agccaaggttactacaacacctgcaccagtgatgccaccgctctctattccagaggacca
cttgaacccaaagacagagctgcctctgtgcatgtggggacatctcagactcctgcctac
tatccttatgattacacatttggacaatatccttatgacagatatgggtattcctcctct
gatggagcatcgcgtcgtaaaaatgccacccgtgagacgacgggtaccttgaaagcctgg
ctgcaggagcaccagaagaacccctacccaactaaaggagagaagataatgcttgctatc
atcaccaggatgacccttacacaagtgtcaacgtggtttgcgaatgcccgcaggaggctg
aagaaggagaacaaggtgacgtggtcaccgcgagcttgtaaaagctctgacgaccgaggc
tgtgatgacgacagtgatgaggcagagaagccacttaaaaatgacaaagagcttcctgat
caaccttgtgcagacctgcagagtgatcttgaagacttcgacctactggagtctgatgct
tctgactgtgaaccaaagccacagtttctaccagaggacaatgacgcaaacccaagcaca
aacatcccacatgggcatctcatacacaacccagactcactgcatggtacagagagattg
actcctgactgccccaaactcacatcggtccaagaccaaaacagcgccttttatcctaat
ccagatgtccgaaactctgacaccaagccaaaaatctggtcaatcgctcacactgctgtg
tctttggatcccagcttgcagctagaataccctccctgtatgttgtcgtcgacaaggtcc
tcatctcctgggtatccatcaaacatggcgctaaccaaggtagacacggaacaggattca
ccagtcaccactctcagagaatgggtggacggagttttccatggccccccttttcaacag
cccaaaccagctacattgtggaaaggcttaaatgaagccatgatagaaagcagaacacca
ggacaatcctttgttaggtctacgacatctttgtag
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