Scomber scombrus (Atlantic mackerel): 133995964
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Entry
133995964 CDS
T10651
Name
(RefSeq) glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-like
KO
K00731
glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase [EC:
2.4.1.122
]
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco00512
Mucin type O-glycan biosynthesis
ssco00514
Other types of O-glycan biosynthesis
ssco01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
133995964
00514 Other types of O-glycan biosynthesis
133995964
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ssco01003
]
133995964
Enzymes [BR:
ssco01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.122 N-acetylgalactosaminide beta-1,3-galactosyltransferase
133995964
Glycosyltransferases [BR:
ssco01003
]
Glycan extension
Type 3 chain
133995964
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Glyco_transf_25
Motif
Other DBs
NCBI-GeneID:
133995964
NCBI-ProteinID:
XP_062291456
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All DBs
Position
16:26590386..26593233
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AA seq
273 aa
AA seq
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MTTPDFLESRTRHIKNTWAKRCDVALYMSSVDTDFPTVGLNVSEGRENLYWKTIRAFQYI
YEHHLDDADWFMKADDDTFVIVENLRYMLSKFDPEKPLYLGRRFAPFISQGYMSGGAGYV
LSKEALRRFIKGFDTGECTHFSDIEDMALGKCMETMKVEPADTRDINGKQTFHAFHPKHY
LSRQFPRPRPWFLLYEHYTPTEGPDCCADLTISFHYIHADQMYTLEYLTYHLRAYGYKYR
FDPDKKMDVNTTDVYIRGGEPCAKESHVYAGLH
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgacgacacccgacttcttggaatcccgcaccaggcacatcaagaatacgtgggccaag
cgctgcgacgtagcgttgtacatgagttcagtcgataccgacttcccgaccgtggggctg
aacgtgagtgaggggagggaaaacctttactggaagaccatccgagcatttcagtacatc
tacgagcaccacctggatgacgcagactggttcatgaaggcagacgatgacacgtttgtg
atcgtagagaatctacgctacatgttgtccaagtttgatccagagaagcctttgtacctg
ggcagaaggtttgccccttttatcagccaaggctacatgagtggaggagcaggttatgtt
ctcagtaaggaagcactaaggagatttatcaaagggtttgatactggagaatgcacccac
ttctctgatattgaggacatggctctggggaaatgtatggagacgatgaaggtggaacca
gcggacacacgagatattaacgggaaacaaacattccatgctttccacccaaagcattac
ctgtccagacagttcccaaggccaagaccttggtttctgctttacgagcactacactcca
acagagggtccagactgctgtgcagatttaacgatatcctttcactacatacacgccgac
cagatgtatactttggagtacctgacctaccacctgcgggcgtatggatacaaatacaga
tttgatccagataaaaaaatggacgttaataccacagacgtctatatcaggggtggcgaa
ccatgtgccaaggagagccatgtgtatgcaggtttgcattag
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