Scomber scombrus (Atlantic mackerel): 133996135
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Entry
133996135 CDS
T10651
Name
(RefSeq) adhesion G protein-coupled receptor B1-like
KO
K04596
adhesion G protein-coupled receptor B1
Organism
ssco Scomber scombrus (Atlantic mackerel)
Pathway
ssco04115
p53 signaling pathway
ssco04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
133996135
09143 Cell growth and death
04115 p53 signaling pathway
133996135
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ssco01002
]
133996135
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133996135
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ssco04030
]
133996135
Peptidases and inhibitors [BR:
ssco01002
]
Mixed peptidases
Family P2
133996135
Membrane trafficking [BR:
ssco04131
]
Endocytosis
Phagocytosis
Others
133996135
G protein-coupled receptors [BR:
ssco04030
]
Adhesion receptor family
Brain-specific angiogenesis inhibitor (BAI)
133996135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_2
AGRB_N
TSP_1
TSP1_spondin
GAIN
TSP1_CFP_C
TSP1_ADAMTS
HRM
TSP1_CCN
RIG-I_C
Motif
Other DBs
NCBI-GeneID:
133996135
NCBI-ProteinID:
XP_062291683
LinkDB
All DBs
Position
16:11292961..11310889
Genome browser
AA seq
1526 aa
AA seq
DB search
MAWSALTGPCVALVLLFFGLTSCTPSGPASATCATLEQSRFFGVFSSTTTLPDTPCSWTL
QNPDPRRYTVYMKITKPTDSCIPRQIRTFQFDSFIETSRTYLGMESFDEVVRLCDASTTV
TYLESSKQFLQIRKLAPRNALEIVEGESGVSEFKAEFLVVGKRNPSMPACQMLCQWLEKC
LSSSTHDYPCGIMNTPCQCWEAPKRKPGSCYRGGVYVEKCLTVPRDNGRDAEIIKGWAGW
GRWSVCSQECGGGVQVRSRSCQPDDGVCEGTVEEGRACNPQQCIGKERNRSQGLRAIIGL
KRDNVDDSNHGVVATQTDAKTDEWSTWSSCSVSCGEGWQSRTRICATSSFTTQCVGPLRE
NRPCNNTAVCPVDGAWDEWTPWSLCSSTCGRGYRDRTRTCKLPKNGGEPCRGPTKQTKFC
NIAVCPVDGSWNEWSAWSACSASCSNGTVQRTRECNGPSYGGSECHGSWKETSNCFLKEC
PVDGRWHSWSSWGSCSKTCGGGIQQRQRVCEGPFFDGAPCPGEKGEQRRCSERRCPEPHE
ICPEQNTGDVVWKKTPAGDLAAITCPADASGMILRRCTLDAVGLAFWENPTHHKCVSKNY
ENIQMLSRDYISKAQMGQSMDGVAEVISRLRFSSDEGAKYSGDLLAVMEILKNTTEVYKG
TRLRLSNADVENYVQTISNLLKEEHRDKWEEAQLMGANIKKFLRLVEDFVNMIGMQMSGF
QDIYEVTENLVLSIHKRPTTTSSNFTFPIKGWRGMLDWVRTSEEKISVSRDALSIEQTDA
NDAFVTGIVLYRNLASILSFQSNTTLLNSKVVTVIVNPTPNLLSTPVEIEFPHLHNGTIN
ETCLSWDESETSSLLGSWSARSCRAVPVHSFRTKCVCDSLSTFAIFAHVNSDSIMDKALL
PSVTLIVGCGVSSLTLLLLIIIYVSVWKYIRSERSVILINFCLSIICSNALILIGQTQAR
NKVVCTLVAAFLHFFFLSSFCWVLTEAWQSYMAVTGRLRNRIIRKRFLCLGWGLPALVVA
VSVGFTKAKGYGTVNYCWLSLEGGLLYSFVGPAAAVVLVNMVIGILVFNKLVSKDGITDV
KLKERAGASLWSSCVVLPLLALTWMSAVLAITDRRSALFQILFAVFDSLEGFIIVMVHCI
LRREVQEAVKCRVVDRKDDGNGDSGSSHHNGHTQHMQSDNEKDGDSSRIGMKSSSEEKMP
PPQLPLPMGSNFHTLPSNPNKSHMQAVPEYSSHTLTLKREKSRLAGGIDPSCGKPVYVCE
GELFKQLDADLARVQAEGSLSDGSGYVLMPNTTSTLRSKPKDDPTKYNISVEQLPQARLM
HLSGPFAEPQAAFGMKSIPADQVSVSYSERDSPIQNIHNMSSESHITHSSLENTFESMNS
MMSKSETISTLSMSSLERQKSRYAELDFEKIMHTKKRHQNMFQDLNRKLHHAEKDRESPA
SDSKSVRWSVSSGGSDKTNHSDKQQGPLERPWEGVRGLPQSPPAWVRKDLEPLAASPLEL
HSVEWEKSSTTIPLVGQDIIDLQTEV
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggtcagctcttactggcccttgtgtggcccttgtcctgctattcttcggtttg
acctcctgcactccctctggcccggcctctgccacctgcgccaccttggagcagagtcgc
ttctttggtgtattctcctccacaaccaccctgcctgacacaccatgctcctggaccctg
cagaaccctgatccccgccggtacactgtctacatgaagatcaccaagcccaccgactcc
tgcataccccgccagatcaggaccttccagttcgactccttcattgagacttctcgcacc
tacctgggtatggagagcttcgatgaggtggtcaggctgtgtgacgcgtcaaccactgtc
acctacctggagtccagcaagcagttcctgcagatccgcaagttggccccaagaaatgcc
ctggagattgtggagggagagagcggtgtcagtgagttcaaggctgagtttctggttgtg
gggaagaggaacccaagcatgcctgcctgccagatgctgtgccagtggctggagaagtgc
ctgtccagtagcacccatgattatccctgtggtattatgaacaccccttgccagtgctgg
gaggcccccaagaggaagccagggagctgctacaggggtggtgtctacgttgagaaatgc
cttacagtgcccagagacaacggacgtgatgctgagattatcaagggctgggctggttgg
ggacgctggtcagtatgcagccaggaatgcggtggcggagtccaggtgcgcagccgaagc
tgtcagcctgacgatggtgtgtgtgagggaacagttgaagaagggcgggcttgcaaccct
cagcagtgcattggcaaagagcgcaacaggagccagggtctgcgggccatcatcggtttg
aagagagacaatgttgatgattctaaccatggagttgttgcaacccagacagatgctaag
acagatgagtggtccacctggagttcatgttcagtcagctgtggggagggctggcagagc
cgcacccgcatctgtgcaacttcctccttcaccacccagtgtgtcggacccctgcgtgag
aatcgtccctgcaacaacacagctgtctgccccgtggatggtgcttgggatgagtggacc
ccctggagcctgtgctcatccacatgtggtcgtggttaccgtgaccgtacccgcacatgc
aagctgcccaagaatggaggagagccttgccgcggccctacaaaacaaaccaagttctgc
aacatcgctgtctgccccgtggatggatcctggaacgagtggtctgcctggagtgcatgc
tctgcttcttgctccaatggtaccgtacagaggacacgggaatgcaacggcccatcctat
ggaggctctgagtgccacggcagctggaaagagacatcaaactgtttcctgaaagagtgc
cccgttgatggacgctggcattcatggagctcatggggcagctgcagcaagacttgcggt
ggaggcatccagcagaggcagagagtctgtgaaggacctttctttgacggagcaccttgc
cctggtgaaaagggagagcagaggcgttgcagtgagaggagatgtcctgagccccatgag
atctgcccagagcagaacactggagatgttgtgtggaagaaaacccccgctggagacctg
gctgccatcacctgccctgctgatgcctcaggtatgattcttcgtcgatgcaccctagat
gctgtaggtcttgccttctgggagaaccccactcaccacaagtgtgtctccaagaactat
gagaacattcagatgctgtcaagggactacatctccaaagcacagatggggcagagcatg
gacggggtcgctgaggtgatttcgcgcctgagattctcctccgatgaaggggccaagtac
agcggcgacctcttggctgtcatggaaatcctgaagaacaccactgaagtgtacaaggga
accagactgagactgagcaacgctgatgtagagaactacgtccagaccatcagcaactta
ctgaaggaggaacatcgtgacaaatgggaagaggcacagctgatgggtgccaacattaag
aagtttctccgccttgttgaggactttgtgaacatgatcggcatgcaaatgagcggcttt
caggacatttatgaagtcacagagaatttagtgctgagcatccataagcgcccaacgacc
acaagctccaacttcaccttccccattaaaggctggaggggcatgctggactgggttagg
acctcggaggagaagatctcagtgtcccgtgatgctttgtccattgagcaaactgatgcc
aatgatgcttttgtgaccggcatcgtcctctacagaaaccttgcctctattctgtccttc
cagagcaacaccaccttactcaactcaaaagtggtgacagtgatcgtcaatcccacccca
aatctactgtcaacccccgttgagatcgagttcccccacctccacaacggcaccataaat
gagacatgcctctcatgggacgagagcgaaacttcctctctacttgggtcttggtctgct
cggagctgcagagcggtccccgttcattcattcagaaccaaatgcgtgtgtgacagcctc
tccaccttcgccattttcgcgcacgtcaactccgactcgatcatggacaaggcactgctc
ccatccgtgactctcatagttggctgtggggtctcctctctcaccctgctgctcctcatc
atcatctacgtctccgtgtggaagtacatccgctccgagcgctccgttatcctcatcaac
ttctgcctgtctattatatgctccaatgccctcattctcatcggacaaactcaggctcgc
aacaaggtcgtgtgcactctcgtagctgctttcctgcacttctttttcctctcctctttc
tgctgggtgctgacagaagcttggcagtcctacatggctgtcactggtcgtctgcgcaac
cgcatcatccgcaagcgcttcttatgcttgggctggggccttcctgcattggtggtggct
gtgtctgtgggtttcacaaaagctaagggttacggcactgtcaactactgctggctgtct
cttgagggtggactcctctactcctttgttggccctgccgcagctgttgttttggtgaat
atggtcattggtattctggtcttcaacaagctggtatccaaggacggcatcaccgacgtg
aagctgaaggagagagccggggcatcactgtggagctcctgcgtggttctgcctctcctg
gccctcacctggatgtctgctgtgctggccatcaccgatcgccgctctgccctcttccag
atcctctttgctgtcttcgactctctggagggtttcatcatcgtcatggtccactgcatc
ttgcgtagagaggttcaagaagctgtaaagtgcagagtagtcgaccgcaaggatgacgga
aatggagactctggcagttctcatcacaatggccacacccagcatatgcagtctgataac
gaaaaggatggagattcaagcagaataggaatgaagagctcctctgaggagaagatgcct
cctcctcagctgcctcttcccatgggatccaacttccacaccctgccatccaaccccaat
aagagccacatgcaggcggttcctgaatattccagccacacgctcaccttgaagagagag
aaaagccgtctggcgggcggtatcgacccatcctgcggaaaacctgtgtatgtgtgcgag
ggagagctcttcaagcagctggacgctgatctcgctcgggttcaggctgagggcagcctc
tccgacggcagcggttatgtactcatgcccaacactacctccaccctgaggtccaagccc
aaagatgacccaacgaaatacaatatcagtgtggagcagctgccacaggccagactcatg
cacctcagcgggccctttgccgagccacaggccgcctttgggatgaagtcgatccccgct
gaccaggtcagcgtgtcttattcagagagggactcaccaatccagaacatccacaacatg
tcgagtgagtctcacatcacccacagcagcctggagaacacctttgagtccatgaactcc
atgatgtccaagagtgagacgatctccacgctgtccatgagctccttggagagacagaaa
tctcgttatgctgagttggactttgagaaaatcatgcacacaaagaagcgccaccagaac
atgttccaggacctaaacaggaagttgcatcatgctgagaaagacagagagtcacccgct
tctgacagcaagtctgtgagatggagtgtgtcatctggaggaagtgacaaaacgaaccac
agcgacaaacagcagggtcctctggagaggccatgggaaggagtccggggattaccgcag
tcaccccctgcatgggtacgcaaagacctggagcccctagctgcctcacctctggagctg
cactctgtggaatgggagaagtccagcaccaccatccctctggtggggcaggatatcatc
gacctgcagacggaggtctga
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integrated database retrieval system
