KEGG   Scomber scombrus (Atlantic mackerel): 133996169
Entry
133996169         CDS       T10651                                 
Name
(RefSeq) ras-related protein Rab-5A
  KO
K07887  Ras-related protein Rab-5A
Organism
ssco  Scomber scombrus (Atlantic mackerel)
Pathway
ssco04137  Mitophagy - animal
ssco04144  Endocytosis
ssco04145  Phagosome
ssco04148  Efferocytosis
ssco05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:ssco00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    133996169
   04145 Phagosome
    133996169
   04137 Mitophagy - animal
    133996169
   04148 Efferocytosis
    133996169
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    133996169
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ssco04131]
    133996169
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ssco04147]
    133996169
   04031 GTP-binding proteins [BR:ssco04031]
    133996169
Membrane trafficking [BR:ssco04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    133996169
 Endosome - Lysosome transport
    133996169
Exosome [BR:ssco04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   133996169
  Exosomal proteins of other body fluids (saliva and urine)
   133996169
  Exosomal proteins of colorectal cancer cells
   133996169
  Exosomal proteins of bladder cancer cells
   133996169
GTP-binding proteins [BR:ssco04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    133996169
SSDB
Motif
Pfam: Ras Roc Arf Gtr1_RagA MMR_HSR1 GTP_EFTU RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 133996169
NCBI-ProteinID: XP_062291725
LinkDB
Position
16:15862006..15870447
AA seq 216 aa
MANRGGATRPNGPNAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQ
RQASPNIVIALSGNKADLANKRAVDFQDAQSYADDNSLLFMETSAKTSMNVNEIFMAIAK
RLPKSEPQAAGANSGRNRGVDLTEAAQPAKAPCCSN
NT seq 651 nt   +upstreamnt  +downstreamnt
atggccaatcggggaggagctacgagacccaatggacccaatgcaggcaacaagatctgt
cagtttaagctggtgctgttgggagaatcagctgtggggaagtccagcttagtgctccgt
ttcgtcaagggccagttccatgaattccaggagagcacaataggagcggcctttctcacc
cagacagtgtgtctggatgacacaacagtgaagtttgaaatctgggatactgcaggtcag
gagcgttaccacagtttggcacccatgtattacagaggagcgcaggccgccatcgtggtc
tatgacatcacaaacgaggagtcctttgcacgggcaaagaactgggtgaaggagcttcaa
agacaagctagccctaacatagtcattgctctgtcaggcaacaaggctgacttagccaac
aagagagctgtcgacttccaggatgcccagtcctacgcagatgacaacagcttacttttc
atggaaacgtcggccaagacatctatgaatgtgaatgagatatttatggctattgctaag
agattgccgaagagtgagcctcaggccgcaggcgctaacagcgggcggaaccgaggagtg
gatctgacagaagctgcccagccagccaaggctccgtgctgcagtaactaa

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