Scomber scombrus (Atlantic mackerel): 133996176
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Entry
133996176 CDS
T10651
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1-like
KO
K04944
potassium intermediate/small conductance calcium-activated channel subfamily N member 3
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ssco04040
]
133996176
Ion channels [BR:
ssco04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
133996176
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GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
133996176
NCBI-ProteinID:
XP_062291736
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Position
16:complement(11544692..11550825)
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AA seq
683 aa
AA seq
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MEHSASMNSSVVDGDEVEDQRPLLPQRMAPPPQACTPQCGIHHTVQTADHTVWLDRTQAM
ATTPLYNGQLYVTPSPRSNRRADKAKGKEKKSDKRSGGGRQNPGHKDRNHQCKAKNAGSH
RLQEKVTSFSDIPVSPCGSPFKSPCRSHLDVKDAESRGRRKSGNVSLEMHDCQSLPEIII
TSKDDDLQSHNESSQYCQDPSASEARGLLPGAECPCQSTNPSPQPSPKHKVDTKDDPYWK
THNIGWRLVHRRALFLKRQQLNDCALAVGLFGVVLMVMETELSWSVYSKSSIYSLALKAV
ISLSTVIVVGLIIAYHYCEVQLYVNDIGAEDWRIAMTTERLALIALELTVVAIHPYPVGL
QSYFQQTVTRPSLSETELEIILALPMFLRLYLLGRAMMLHSRLFTDTASRSIGALNKIHF
NTRFVGKTLMTTYPGTVLMIFSVSLWIVAAWGLHVCERHHNYRDLSSNYMEALWMVSVTF
LSIGYGDVVPHTYCGRSICLLTGIMGAGCTVLVVAVVARKLELTRAEKHVHNFMMDSHIS
KTLKIAAANVLRETWLIYKHTKLLREKDSSRVRMHQRKLLLAIHQLRRVKMEKRVLADQA
NTLVDLCKMQSLMYDVLSEVQGCRGELDSHIRSLEKHVQELREGFRSLMPLLSSTLSTQN
SSIRHLLREREGNTETASVSADR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggagcactcggcctctatgaactcgtcagtggtggatggagacgaggtggaggaccag
cgccccctcctcccacagaggatggctcctccacctcaggcctgcaccccgcagtgtggg
atacaccacaccgtccaaacagcagatcacactgtttggctggacagaacccaggccatg
gccaccacacctttatacaacggccagctttatgtcacgccttcacctcgctccaacagg
agggcggacaaagccaaaggcaaagagaagaaaagtgacaaaagatcaggagggggtaga
caaaatccaggacacaaggatcgaaatcatcagtgcaaagccaaaaatgcaggatctcac
agactccaggagaaggtcacctctttcagtgacatccccgtttctccctgcgggtcaccc
tttaaaagcccttgcaggtcgcacttagatgtcaaggatgcagagagcagagggcgccgg
aagtcaggtaatgtttccttggagatgcacgactgccagagcctcccagagatcatcatc
accagcaaagacgatgacctccagtctcacaatgagtcttctcagtactgtcaggacccc
tcggcatctgaggccagaggactgctgccaggagctgagtgtccctgtcagagcaccaat
cccagtccgcagccaagcccaaaacataaggtggacaccaaggacgacccatactggaag
acccacaacatcggttggcggctggtccacaggagggctctgtttctgaaaaggcagcag
ctgaacgactgcgctctggccgtggggttatttggcgttgtgttgatggtgatggagacg
gagctctcctggagcgtctacagcaagagctccatctactctctcgctctcaaggctgtc
atcagtttgtcaacagtcattgtggttggcctcatcatagcataccactactgtgaggtg
cagctctacgttaacgacatcggggcagaagattggcggattgccatgacaactgagcgt
ctggctctgatagcgttggaactgacagtagtggccatccatccgtacccggtgggtctg
cagtcgtacttccagcagaccgtgactcgtccgtcgctgtcagagacggagctggagatc
atcctggctctgcccatgttcctgaggctctacctgctgggccgggccatgatgctgcac
agccgcctcttcactgacaccgcctcccgcagcatcggggcgctcaacaagatacacttc
aacacccgatttgtggggaaaacactaatgaccacctaccccggcactgtgctgatgatt
ttcagcgtctctctgtggattgtggcagcgtggggtttacatgtttgtgagagacatcac
aactacagagacctgagtagtaactatatggaggccctgtggatggtctccgtcaccttc
ttgtccatcggttacggagacgtggtccctcacacctactgcggtcggagcatctgcctc
ctcactgggataatgggagcaggctgcacagtcctggtggtcgccgtggttgccaggaag
ctggagctgaccagagcagagaaacatgttcacaatttcatgatggactcccacatctcc
aagacattaaaaattgcagcagcaaatgtgctgagagagacttggctcatctacaaacac
actaagctgttgagagaaaaggacagctctagagtccgcatgcaccagcggaagctgctg
ctggccatccaccagctgcggcgggtgaagatggagaagagggtcctggcagaccaggcc
aacacactggtagatctctgcaagatgcagagtctgatgtatgacgtcctgtcggaggtg
cagggctgcaggggggagctggactcgcacatccgcagcctggagaagcatgtgcaggag
ttgagggagggtttcaggagtctgatgccgctactgtccagcaccctgtcaacgcagaac
tcctccatccgccaccttctcagggagcgggaggggaacacagagactgccagtgtgagc
gcagacaggtag
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