Scomber scombrus (Atlantic mackerel): 133996197
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Entry
133996197 CDS
T10651
Symbol
snx27a
Name
(RefSeq) sorting nexin-27a
KO
K17936
sorting nexin-27
Organism
ssco Scomber scombrus (Atlantic mackerel)
Brite
KEGG Orthology (KO) [BR:
ssco00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ssco04131
]
133996197 (snx27a)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
133996197 (snx27a)
Membrane trafficking [BR:
ssco04131
]
Protein recycling
Others
Others
133996197 (snx27a)
Domain-containing proteins not elsewhere classified [BR:
ssco04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
133996197 (snx27a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
VirE3
PDZ_2
SNX17-31_F2_FERM
SNX17_FERM_C
USP7_C2
DarA_N
Motif
Other DBs
NCBI-GeneID:
133996197
NCBI-ProteinID:
XP_062291758
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Position
16:complement(11583071..11597981)
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AA seq
563 aa
AA seq
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MADVEGDETRSALPSSSRNGPVVGVSAGTPGQTATTVTSGPRTVRIVKSESGYGFNVRGQ
VSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVSVEGATHKQVVDL
IRAGEKELVLAVLSVPSQEGDGLEGGEDIQPNYDYSDKQAVPISVPTYKHVEQHSERFVV
YNVYMSGRQLCSKRYREFAILHQNLKREFSNFNFPKLPGKWPFSLSEQQLDARRRGLEEY
LERVCSVRVIGESDIMQEFLSESDENYNGITDVELRIALPDKTTISVRVRKNSTTDQVYQ
ALVLKVGMDSIMASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLALRKWLF
SFQEEELLRDNPLALHYCFHQALDDVKKGFIKTEDKSYQLQKLAEQRKMATYLSLLRSCE
GYNELTFPHCPCDSRRKGHVITAISIHHFKLHACTEDGTLENQVIAFEWGEMQRWDTDEE
GMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKQVEEEASDKDNKNCSNT
EYLPPLETQQKGWRHLGGEIATS
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgtagaaggcgatgaaactcggtcggctctcccttcatcgtcccgtaacggc
ccggtggtcggtgtgtctgcgggcacaccgggccagactgcaaccacggtaacgtccggt
ccacggacggtccggatcgtcaaatccgaatcgggctacggttttaatgttcgcggtcaa
gttagcgaaggaggacagctacggagcatcaacggggaactgtacgctcctcttcagcat
gtcagcgctgttttgcccggaggggcagcagaccgagccgggatatctaagggtgaccgc
atcctggaggttaatggggtgagcgtcgagggtgctacccataagcaggtcgtggacttg
atccgcgctggagagaaggagctggttctggcggttctgtctgtgccgtcccaggagggt
gatgggttggaaggcggagaggatatccaaccaaactatgactacagtgacaagcaggcc
gtgcccatttccgtccccacatacaaacatgtagagcagcattccgagaggtttgtggtg
tacaacgtgtatatgtcaggcagacagctgtgctctaagcgctaccgggagtttgccatc
ctacaccagaacttgaagagggagttttccaacttcaacttcccaaaacttcctggcaaa
tggcccttctctctttctgaacagcagctggatgctcgtcgtagaggcctggaagaatac
cttgagcgagtttgctccgtgcgggtgatcggggagagtgacatcatgcaggagtttctc
tctgaatcagatgagaactacaatggcataacagatgtagagctgcgaatagccctgcca
gacaagaccaccatctccgtcagagtccgcaagaacagcaccacagaccaggtgtaccag
gcattagtgttgaaggttggaatggacagtattatggccagctactttgccctgtttgaa
gtcatcaaccactcatttgtgcggaagctggcacctaatgagttcccccacaagctttat
gtgcagaactacacatcggcagtgccggggacgtgtttggcactccgcaaatggttgttc
agcttccaggaggaggagttactcagagacaacccgctggcactacactactgctttcac
caggcactggacgatgtgaagaagggattcataaaaacagaggacaaatcctaccagctg
cagaaactggcagagcagcgcaagatggccacgtacctgagcctgttgcggtcatgtgag
ggctacaacgaactgacattcccccactgcccctgcgactccaggaggaagggacacgtc
atcacagctatcagcatccatcacttcaagctgcacgcttgtactgaggatggcacactg
gagaatcaggtgatcgcttttgagtggggggagatgcagcgctgggacactgacgaggag
gggatggctttctgttttgagtacgccagaggagagaagaaacctcgctgggtcaagatc
ttcactccatattttaactacatgcatgagtgctttgagcgggtcttttgtgagctgaag
tggaggaaacaggttgaagaagaggcatctgacaaagacaacaaaaactgcagtaacact
gagtatctgcctcctctggagacacagcagaagggatggcgccacctagggggggagatt
gcgacttcctaa
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